GT622868

EST Overview


Name	GT622868
Unique Name	GT622868
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	626

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

[Close]

BLAST of GT622868 vs. TrEMBL
Match: Q2HVS3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC148762g13v2 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.019e-47
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: B7FHA0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.019e-47
Identity = 94/95 (98.95%), Postives = 94/95 (98.95%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: B9T739_RICCO (60S ribosomal protein L34, putative OS=Ricinus communis GN=RCOM_0170210 PE=4 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.497e-47
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: B9S8W0_RICCO (60S ribosomal protein L34, putative OS=Ricinus communis GN=RCOM_0836350 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.873e-47
Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: B7FFC0_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 7.670e-47
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYRR HSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRHHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: C6SWN5_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.709e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: A9PDF8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_825551 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.232e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: A9P8R1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823446 PE=4 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.232e-46
Identity = 92/95 (96.84%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: A9PB27_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.915e-46
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TrEMBL
Match: A5C1J0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010664 PE=4 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 1.108e-45
Identity = 90/95 (94.74%), Postives = 93/95 (97.89%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQ+TKKRA+GPKCPVTGKRIQGIPHLRP EYKRSRL RNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQSTKKRANGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 3.728e-49
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF
Sbjct:    1 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.566e-47
Identity = 91/95 (95.79%), Postives = 94/95 (98.95%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYR+RHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.326e-46
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.326e-46
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.716e-44
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34A_SCHPO (60S ribosomal protein L34-A OS=Schizosaccharomyces pombe GN=rpl34a PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.974e-22
Identity = 52/95 (54.74%), Postives = 69/95 (72.63%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            M QR+TYRRR +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++TV RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNRTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNKKTVQRAYGGCLSANAVKDRIVRAF 93

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34_DICDI (60S ribosomal protein L34 OS=Dictyostelium discoideum GN=rpl34 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.476e-21
Identity = 54/95 (56.84%), Postives = 64/95 (67.37%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLTYRRR SY T SN  ++VKTPGG+LVYQ   K    P+C   G  + GIP LRP +YK   L ++RRTV+RAYGG      VR RI+RAF
Sbjct:    1 MVQRLTYRRRLSYRTTSNATKIVKTPGGRLVYQYIGKTGKVPRCGECGVNLAGIPALRPYQYK--NLPKSRRTVSRAYGGSKCAKCVRNRIVRAF 93

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34B_SCHPO (60S ribosomal protein L34-B OS=Schizosaccharomyces pombe GN=rpl34b PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.928e-21
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            M QR+TYRRR +Y T+SN+ R++KTPG  + Y   KK  + P+C  TG  +QGIP LRP E+  +RLS N++ V RAYGG LS  AV++RI+RAF
Sbjct:    1 MAQRVTYRRRLAYNTRSNKTRIIKTPGNNIRYLHIKKLGTIPRCGDTGVPLQGIPALRPREF--ARLSHNQKKVQRAYGGCLSANAVKDRIVRAF 93

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34_AEDTR (60S ribosomal protein L34 OS=Aedes triseriatus GN=RpL34 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 2.784e-20
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLT RRR SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93

[Close]

BLAST of GT622868 vs. SwissProt
Match: RL34_AEDAL (60S ribosomal protein L34 OS=Aedes albopictus GN=RpL34 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 2.784e-20
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRLT RRR SY TKSN+ RVV+TPGG+LVY   KK+ + PKC    +++ GI   RP+E  R R+ R  +TV R +GGVL    +RERIIRAF
Sbjct:    1 MVQRLTLRRRLSYNTKSNKRRVVRTPGGRLVYLYVKKQRTVPKCGQCKEKLSGIKPSRPSE--RPRMCRRLKTVTRTFGGVLCHRCLRERIIRAF 93

[Close]

BLAST of GT622868 vs. TAIR peptide
Match: AT1G69620.1 (| Symbols: RPL34 | ribosomal protein L34 | chr1:26189900-26191081 FORWARD LENGTH=119)

HSP 1 Score: 186.037 bits (471), Expect = 1.371e-47
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TAIR peptide
Match: AT1G26880.1 (| Symbols: | Ribosomal protein L34e superfamily protein | chr1:9315640-9316681 REVERSE LENGTH=120)

HSP 1 Score: 186.037 bits (471), Expect = 1.371e-47
Identity = 90/95 (94.74%), Postives = 92/95 (96.84%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRERIIRAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAF 95

[Close]

BLAST of GT622868 vs. TAIR peptide
Match: AT1G26880.2 (| Symbols: | Ribosomal protein L34e superfamily protein | chr1:9315798-9316681 REVERSE LENGTH=96)

HSP 1 Score: 178.333 bits (451), Expect = 2.858e-45
Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERII 312
            MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRLSRNRRTVNRAYGGVLSG AVRER +
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPSEYKRSRLSRNRRTVNRAYGGVLSGSAVRERFV 92

[Close]

BLAST of GT622868 vs. TAIR peptide
Match: AT3G28900.1 (| Symbols: | Ribosomal protein L34e superfamily protein | chr3:10902864-10904415 REVERSE LENGTH=120)

HSP 1 Score: 177.563 bits (449), Expect = 4.875e-45
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 1

Query:   37 MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPTEYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAF 321
            MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RN RTVNRAYGGVLSG AVRERI+RAF
Sbjct:    1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAF 95

The following BLAST results are available for this feature:

BLAST of GT622868 vs. TrEMBL
BLAST of GT622868 vs. SwissProt
BLAST of GT622868 vs. TAIR peptide

BLAST of GT622868 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
Q2HVS3_MEDTR	2.019e-47	98.95	Putative uncharacterized protein OS=Medicago trunc...	[more]
B7FHA0_MEDTR	2.019e-47	98.95	Putative uncharacterized protein OS=Medicago trunc...	[more]
B9T739_RICCO	4.497e-47	96.84	60S ribosomal protein L34, putative OS=Ricinus com...	[more]
B9S8W0_RICCO	5.873e-47	96.84	60S ribosomal protein L34, putative OS=Ricinus com...	[more]
B7FFC0_MEDTR	7.670e-47	97.89	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SWN5_SOYBN	1.709e-46	96.84	Putative uncharacterized protein OS=Glycine max PE...	[more]
A9PDF8_POPTR	2.232e-46	96.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9P8R1_POPTR	2.232e-46	96.84	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A9PB27_POPTR	2.915e-46	95.79	Putative uncharacterized protein OS=Populus tricho...	[more]
A5C1J0_VITVI	1.108e-45	94.74	Putative uncharacterized protein OS=Vitis vinifera...	[more]

BLAST of GT622868 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL34_PEA	3.728e-49	100.00	60S ribosomal protein L34 OS=Pisum sativum GN=RPL3...	[more]
RL34_TOBAC	1.566e-47	95.79	60S ribosomal protein L34 OS=Nicotiana tabacum GN=...	[more]
RL342_ARATH	1.326e-46	94.74	60S ribosomal protein L34-2 OS=Arabidopsis thalian...	[more]
RL341_ARATH	1.326e-46	94.74	60S ribosomal protein L34-1 OS=Arabidopsis thalian...	[more]
RL343_ARATH	4.716e-44	89.47	60S ribosomal protein L34-3 OS=Arabidopsis thalian...	[more]
RL34A_SCHPO	2.974e-22	54.74	60S ribosomal protein L34-A OS=Schizosaccharomyces...	[more]
RL34_DICDI	1.476e-21	56.84	60S ribosomal protein L34 OS=Dictyostelium discoid...	[more]
RL34B_SCHPO	1.928e-21	53.68	60S ribosomal protein L34-B OS=Schizosaccharomyces...	[more]
RL34_AEDTR	2.784e-20	55.79	60S ribosomal protein L34 OS=Aedes triseriatus GN=...	[more]
RL34_AEDAL	2.784e-20	55.79	60S ribosomal protein L34 OS=Aedes albopictus GN=R...	[more]

BLAST of GT622868 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT1G69620.1	1.371e-47	94.74	\| Symbols: RPL34 \| ribosomal protein L34 \| chr1:26...	[more]
AT1G26880.1	1.371e-47	94.74	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]
AT1G26880.2	2.858e-45	92.39	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]
AT3G28900.1	4.875e-45	89.47	\| Symbols: \| Ribosomal protein L34e superfamily p...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008195	Ribosomal protein L34e	PRINTS	PR01250	RIBOSOMALL34	coord: 25..38 score: 5.3e-30coord: 38..55 score: 5.3e-30coord: 56..66 score: 5.3e-30coord: 78..100 score: 5.3
IPR008195	Ribosomal protein L34e	PANTHER	PTHR10759	60S RIBOSOMAL PROTEIN L34	coord: 16..123 score: 1.4
IPR008195	Ribosomal protein L34e	PFAM	PF01199	Ribosomal_L34e	coord: 13..108 score: 6.6
IPR018065	Ribosomal protein L34e, conserved site	PROSITE	PS01145	RIBOSOMAL_L34E	coord: 27..40 score
None	No IPR available	SEG	seg	seg	coord: 108..128 score
None	No IPR available	SEG	seg	seg	coord: 16..29 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT622868 ID=GT622868; Name=GT622868; organism=Lens culinaris; type=EST; length=626bp
TTGTCTGTGTTGTCACGAAAATCAAGCACAGAGAAGATGGTTCAAAGGCT
CACCTACCGCCGTCGCCATAGCTACGCTACCAAGTCCAATCAACATCGGG
TTGTCAAAACCCCCGGTGGAAAGCTTGTTTATCAGACTACTAAGAAGAGA
GCTAGTGGACCAAAATGTCCTGTTACTGGAAAGAGGATTCAAGGGATTCC
ACATTTAAGGCCCACAGAGTACAAAAGATCAAGGTTATCTAGAAACAGGA
GGACTGTGAACCGTGCTTATGGTGGAGTTTTATCTGGAGGTGCTGTTAGA
GAAAGAATTATTCGTGCTTTCTTGGTTGAGGAACAAAAGATTGTCAAAAA
GGTCTTGAAGATCCAAAAGACAAAGGAAAAGCAAGCTTCAAAGGCTTGAG
TTTCATGAAACTGAGATAAAGATCTTTTTGGAGGATTTTTAGGTTTGAGA
TTATAGTACAAGCACAAAATTTATTAGAGTTGCTACTTTTGTTAATTTTG
TGCTCATTTGTCTTGTTTGAACTTATTCTAGTGGGACTGTTAGCTTTGTC
AACTAATCCGCTATGATACAGTTTTGTTTGTCTCAATTTTCTTTTGATGG
TTTATTGATATTTTCATGTTTACTCA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR008195	Ribosomal_eL34
IPR018065	Ribosomal_L34e_CS

Search form