GT623078

EST Overview


Name	GT623078
Unique Name	GT623078
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	835

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT623078 vs. TrEMBL
Match: B7FGS0_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 4.266e-104
Identity = 186/192 (96.88%), Postives = 190/192 (98.96%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGI++DHRR+NRSLEGLQANVQRLKTYKAKLVVFPRR RKTKAGDSTPEELANATQVQGSYLPIVREKP VELVK+TDEMKAFKAYYKLRLERTNKRHLG
Sbjct:    1 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLG 192

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BLAST of GT623078 vs. TrEMBL
Match: B7FGV8_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 4.716e-103
Identity = 185/192 (96.35%), Postives = 189/192 (98.44%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGI++DHRR+NRSLEGLQANVQRLKT KAKLVVFPRR RKTKAGDSTPEELANATQVQGSYLPIVREKP VELVK+TDEMKAFKAYYKLRLERTNKRHLG
Sbjct:    1 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTCKAKLVVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLG 192

[Close]

BLAST of GT623078 vs. TrEMBL
Match: B7FMY6_MEDTR (60S ribosomal protein L13 OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 6.810e-102
Identity = 183/192 (95.31%), Postives = 188/192 (97.92%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNVIPNEHFRKH QNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELK AGIPKKLAPTIGI++DHRR+NRSLEGLQANVQRLKTYKAKL+VFPRR RKTKAGDSTPEELANATQVQGSYLPIVREKP VELVK+TDEMKAFKAYYKLRLERTNKRHLG
Sbjct:    1 MVKHNNVIPNEHFRKHSQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKTAGIPKKLAPTIGISVDHRRKNRSLEGLQANVQRLKTYKAKLIVFPRRARKTKAGDSTPEELANATQVQGSYLPIVREKPTVELVKVTDEMKAFKAYYKLRLERTNKRHLG 192

[Close]

BLAST of GT623078 vs. TrEMBL
Match: B9STE6_RICCO (60S ribosomal protein L13 OS=Ricinus communis GN=RCOM_1318700 PE=3 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 9.525e-96
Identity = 169/192 (88.02%), Postives = 184/192 (95.83%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRPIVHGQT KYNMKLRAG+GF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQANVQRLKTYKAKLVVFPRR RK+KAGDS PEELA ATQVQG Y+PIVREKP+VELVK+T+EMK+FKAY KLR+ER N+RHLG
Sbjct:    1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKSKAGDSAPEELATATQVQGKYMPIVREKPSVELVKVTEEMKSFKAYDKLRVERMNQRHLG 192

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BLAST of GT623078 vs. TrEMBL
Match: C6SYZ4_SOYBN (60S ribosomal protein L13 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 2.122e-95
Identity = 172/192 (89.58%), Postives = 181/192 (94.27%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNVIPN HFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAG LRPIVHGQT KYNMK+RAG+GFSLEELKAAGIPKKLAPTIGI++DHRR+NRSLE LQANVQRLKTYKAKLVVFPRR  K KAGDS+ EELANATQVQG +LPIVREKP V+LVK+TDEMKAFKAYYKLRLERTNKRH G
Sbjct:    1 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYKAKLVVFPRRAHKVKAGDSSLEELANATQVQGPFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHHG 192

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BLAST of GT623078 vs. TrEMBL
Match: B9MUD1_POPTR (60S ribosomal protein L13 OS=Populus trichocarpa GN=POPTRDRAFT_917214 PE=3 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 1.053e-94
Identity = 167/192 (86.98%), Postives = 182/192 (94.79%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRPIVHGQT KYNMK+RAG+GFSLEELKAAGIPKKLAPTIGIA+DHRRRNRSLEGLQ NVQRLKTYKAKLVVFPRR RK+KAGDS PEELA ATQVQG ++PIVREKP+VELVK+T+EMK+F+AY KLR ERTN RH+G
Sbjct:    1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLKTYKAKLVVFPRRARKSKAGDSAPEELATATQVQGHFMPIVREKPSVELVKVTEEMKSFRAYDKLRAERTNARHVG 192

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BLAST of GT623078 vs. TrEMBL
Match: D7LS33_ARALY (ATBBC1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_347994 PE=4 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 2.346e-94
Identity = 165/191 (86.39%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKAY K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAYDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. TrEMBL
Match: C6TL61_SOYBN (60S ribosomal protein L13 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 6.826e-94
Identity = 170/192 (88.54%), Postives = 179/192 (93.23%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNVIPN HFRKHWQNYVKTWFNQPARKT RRLARQKKAVKIFPRPTAG LRPIVHGQT KYNMK+RAG+GFSLEELKAAGIPKKLAPTIGI++DHRR+NRSLE LQANVQRLKTYKAKLVV PRR  K KAGDS+ EELANATQVQG +LPIVREKP V+LVK+TDEMKAFKAYYKLRLERTNKRH G
Sbjct:    1 MVKHNNVIPNGHFRKHWQNYVKTWFNQPARKTGRRLARQKKAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRKNRSLESLQANVQRLKTYKAKLVVLPRRAHKVKAGDSSLEELANATQVQGPFLPIVREKPTVDLVKVTDEMKAFKAYYKLRLERTNKRHHG 192

[Close]

BLAST of GT623078 vs. TrEMBL
Match: B9DGA4_ARATH (60S ribosomal protein L13 OS=Arabidopsis thaliana GN=At3g49010 PE=2 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 6.826e-94
Identity = 164/191 (85.86%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. TrEMBL
Match: B9S1X7_RICCO (60S ribosomal protein L13 OS=Ricinus communis GN=RCOM_1323880 PE=3 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 8.915e-94
Identity = 167/192 (86.98%), Postives = 180/192 (93.75%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MVKHNNV+PN HF+KHWQNYVKTWFNQPARKTRRR ARQKKAVKIFPRPTAGPLRPIVHGQT KYNMKLRAG+GF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQANVQRLKTYKAKLVVFPRR RK KAGDS  EELA ATQVQG Y+PI REKP+VELVK+T+EMK+FKAY KLR+ER N+RHLG
Sbjct:    1 MVKHNNVVPNGHFKKHWQNYVKTWFNQPARKTRRRAARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQANVQRLKTYKAKLVVFPRRARKFKAGDSAAEELATATQVQGQYMPIAREKPSVELVKVTEEMKSFKAYDKLRVERMNQRHLG 192

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1)

HSP 1 Score: 347.821 bits (891), Expect = 4.372e-95
Identity = 164/191 (85.86%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 6.980e-93
Identity = 162/191 (84.82%), Postives = 178/191 (93.19%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGI++DHRR+NRSLEGLQ+NVQRLKTYKAKLV+FPRR RK KAGDST EELANATQVQG Y+PIVREK A+ELVK+T EMK+  AY K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 9.117e-93
Identity = 162/191 (84.82%), Postives = 178/191 (93.19%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPTAGPLRP+VHGQT KYNMK+R GKGF+LEELK+AGIPKKLAPTIGIA+DHRR+NRSLEGLQ+NVQRLKTYKAKLV+FPRR RK KAGDST EELANATQVQG Y+PIVREK A ELVK+T EMK+ KA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 2.246e-91
Identity = 159/191 (83.25%), Postives = 177/191 (92.67%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIP+ HFRKHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+RAGKGF+LEELK AGIPKKLAPTIGI++DHRR+NRSLEGLQ+NVQRLKTYKAKLVVFPRR R+ KAGDSTPEELANATQVQG Y+PI   K A+ELVK+T ++KAFKAY K+RLERTN RH G
Sbjct:    1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAG 191

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.329e-80
Identity = 143/191 (74.87%), Postives = 162/191 (84.82%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+K W+NYVKT FNQPA KTRRR+ARQ KAVKIFPRPTAGP+RP+VH QT  YNMK+RAGKGF+LEELKAAGIPKKLAPTIGI++DH R+NRSLEG Q NVQRLKTYKAKLV+FPR  R  K GDS  +ELANATQVQ  ++PIVRE P +ELVK+T +MK F AY K+RLE  NKRH G
Sbjct:    1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAG 191

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 1.369e-72
Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 2

Query:   62 NEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            N HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKI PRPTAG LRPIVHGQT KYNMK+R+G+GFSLEELKAAGIPKKLAPTIGIA+DHRRRNRSLEGLQ NVQRL+  + +LVVFPRR  +++     P     ATQV G+Y+PI REK  + L K+  +MK+F AY KLR+ERTN+RH+G
Sbjct:    5 NGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKISPRPTAGTLRPIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKLRVERTNERHIG 187

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.087e-61
Identity = 118/192 (61.46%), Postives = 144/192 (75.00%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            MV+ N+++PN HF K WQ +VKTWFNQPARK RRR AR +KA   FPRP AG L+PIV  QT KYN K R G+GF+LEELK AGIP K APT+GIA+DHRR+NRSLE LQANVQRLKTY+A LV+FPR  +K KA +++  + + A+Q +G  LP+   KPA+ELVKIT +MK    Y KLR+ER N R  G
Sbjct:    1 MVRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNARAEKAKATFPRPVAGSLKPIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKLRIERVNARLKG 192

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3)

HSP 1 Score: 216.853 bits (551), Expect = 1.164e-55
Identity = 109/188 (57.98%), Postives = 135/188 (71.81%), Query Frame = 2

Query:   47 NNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            N +I N HF K WQ  V+TWFNQPARK RRR ARQ KA +I PRP +GPLRP+V   T +Y+ K+RAG+GF+LEELKAAGI KK+A TIGI++D RRRNRS E LQANVQRLK Y+ KL++FPR+  K K GDST EEL  ATQ+ G  +PI +     +   I+++ K FKA+  LR+ R N R  G
Sbjct:    6 NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFG 193

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 9.854e-55
Identity = 107/193 (55.44%), Postives = 139/193 (72.02%), Query Frame = 2

Query:   35 MVKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPA-VELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            M K NN+IPN+H+ K WQ +VKTWFNQPARK RR   R KKA  +FPRP +G LRP+V   T +Y+ KLRAG+GF+LEELK AGI    A TIGIA+D RR+N+SLE  Q N+QRLK Y++KL++FP   +K +AG+S+ EE   ATQ++G  LPI  E+PA VE  ++T + K FKA+  LR  RT+ R +G
Sbjct:    1 MGKGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVG 193

[Close]

BLAST of GT623078 vs. SwissProt
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 3.745e-54
Identity = 109/188 (57.98%), Postives = 131/188 (69.68%), Query Frame = 2

Query:   47 NNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            N +I N HF K WQ  V+TWFNQPARK RRR ARQ KA +I PRP AGPLRPIV   T +YN K+RAG+GF+LEELKAAGI K++A TIGIA+D RRRNRS E L  NVQRLK Y++KL++FPR+    K GDST EE+  ATQ+ G  +PI       +   IT+E K F A+  LR+ R N R  G
Sbjct:    6 NGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLFG 193

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G49010.3 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206)

HSP 1 Score: 347.821 bits (891), Expect = 4.312e-96
Identity = 164/191 (85.86%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G49010.2 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206)

HSP 1 Score: 347.821 bits (891), Expect = 4.312e-96
Identity = 164/191 (85.86%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G49010.1 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=206)

HSP 1 Score: 347.821 bits (891), Expect = 4.312e-96
Identity = 164/191 (85.86%), Postives = 179/191 (93.72%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR RK KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 191

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G49010.4 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=204)

HSP 1 Score: 340.887 bits (873), Expect = 5.270e-94
Identity = 163/191 (85.34%), Postives = 178/191 (93.19%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEELKAAGIPKKLAPTIGIA+DHRR+NRSLEGLQ NVQRLKTYK KLV+FPRR R  KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 189

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT5G23900.1 (| Symbols: | Ribosomal protein L13e family protein | chr5:8064176-8065081 REVERSE LENGTH=206)

HSP 1 Score: 335.495 bits (859), Expect = 2.214e-92
Identity = 159/191 (83.25%), Postives = 177/191 (92.67%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIP+ HFRKHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+RAGKGF+LEELK AGIPKKLAPTIGI++DHRR+NRSLEGLQ+NVQRLKTYKAKLVVFPRR R+ KAGDSTPEELANATQVQG Y+PI   K A+ELVK+T ++KAFKAY K+RLERTN RH G
Sbjct:    1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAG 191

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G48960.1 (| Symbols: | Ribosomal protein L13e family protein | chr3:18150444-18151412 REVERSE LENGTH=206)

HSP 1 Score: 298.901 bits (764), Expect = 2.297e-81
Identity = 143/191 (74.87%), Postives = 162/191 (84.82%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+K W+NYVKT FNQPA KTRRR+ARQ KAVKIFPRPTAGP+RP+VH QT  YNMK+RAGKGF+LEELKAAGIPKKLAPTIGI++DH R+NRSLEG Q NVQRLKTYKAKLV+FPR  R  K GDS  +ELANATQVQ  ++PIVRE P +ELVK+T +MK F AY K+RLE  NKRH G
Sbjct:    1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAG 191

[Close]

BLAST of GT623078 vs. TAIR peptide
Match: AT3G49010.5 (| Symbols: ATBBC1, BBC1, RSU2 | breast basic conserved 1 | chr3:18166971-18168047 REVERSE LENGTH=153)

HSP 1 Score: 230.335 bits (586), Expect = 1.003e-60
Identity = 118/191 (61.78%), Postives = 130/191 (68.06%), Query Frame = 2

Query:   38 VKHNNVIPNEHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTAKYNMKLRAGKGFSLEELKAAGIPKKLAPTIGIAIDHRRRNRSLEGLQANVQRLKTYKAKLVVFPRRGRKTKAGDSTPEELANATQVQGSYLPIVREKPAVELVKITDEMKAFKAYYKLRLERTNKRHLG 610
            +KHNNVIPN HF+KHWQNYVKTWFNQPARKTRRR+ARQKKAVKIFPRPT+GPLRP+VHGQT KYNMK+R GKGF+LEEL                                                     KAGDSTPEELANATQVQG YLPIVREKP +ELVK+T EMK+FKA+ K+RLERTNKRH G
Sbjct:    1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEEL-----------------------------------------------------KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 138

The following BLAST results are available for this feature:

BLAST of GT623078 vs. TrEMBL
BLAST of GT623078 vs. SwissProt
BLAST of GT623078 vs. TAIR peptide

BLAST of GT623078 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FGS0_MEDTR	4.266e-104	96.88	60S ribosomal protein L13 OS=Medicago truncatula P...	[more]
B7FGV8_MEDTR	4.716e-103	96.35	60S ribosomal protein L13 OS=Medicago truncatula P...	[more]
B7FMY6_MEDTR	6.810e-102	95.31	60S ribosomal protein L13 OS=Medicago truncatula P...	[more]
B9STE6_RICCO	9.525e-96	88.02	60S ribosomal protein L13 OS=Ricinus communis GN=R...	[more]
C6SYZ4_SOYBN	2.122e-95	89.58	60S ribosomal protein L13 OS=Glycine max PE=2 SV=1	[more]
B9MUD1_POPTR	1.053e-94	86.98	60S ribosomal protein L13 OS=Populus trichocarpa G...	[more]
D7LS33_ARALY	2.346e-94	86.39	ATBBC1 OS=Arabidopsis lyrata subsp. lyrata GN=ARAL...	[more]
C6TL61_SOYBN	6.826e-94	88.54	60S ribosomal protein L13 OS=Glycine max PE=2 SV=1	[more]
B9DGA4_ARATH	6.826e-94	85.86	60S ribosomal protein L13 OS=Arabidopsis thaliana ...	[more]
B9S1X7_RICCO	8.915e-94	86.98	60S ribosomal protein L13 OS=Ricinus communis GN=R...	[more]

BLAST of GT623078 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RL131_ARATH	4.372e-95	85.86	60S ribosomal protein L13-1 OS=Arabidopsis thalian...	[more]
RL132_BRANA	6.980e-93	84.82	60S ribosomal protein L13-2 OS=Brassica napus PE=2...	[more]
RL131_BRANA	9.117e-93	84.82	60S ribosomal protein L13-1 OS=Brassica napus PE=2...	[more]
RL133_ARATH	2.246e-91	83.25	60S ribosomal protein L13-3 OS=Arabidopsis thalian...	[more]
RL132_ARATH	2.329e-80	74.87	Putative 60S ribosomal protein L13-2 OS=Arabidopsi...	[more]
RL13_TOBAC	1.369e-72	72.13	60S ribosomal protein L13 OS=Nicotiana tabacum GN=...	[more]
RL13_CHLSW	1.087e-61	61.46	60S ribosomal protein L13 OS=Chlamydomonas sp. (st...	[more]
RL13_DANRE	1.164e-55	57.98	60S ribosomal protein L13 OS=Danio rerio GN=rpl13 ...	[more]
RL13_DROME	9.854e-55	55.44	60S ribosomal protein L13 OS=Drosophila melanogast...	[more]
RL13_ICTPU	3.745e-54	57.98	60S ribosomal protein L13 OS=Ictalurus punctatus G...	[more]

BLAST of GT623078 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 7


Match Name	E-value	Identity	Description
AT3G49010.3	4.312e-96	85.86	\| Symbols: ATBBC1, BBC1, RSU2 \| breast basic conse...	[more]
AT3G49010.2	4.312e-96	85.86	\| Symbols: ATBBC1, BBC1, RSU2 \| breast basic conse...	[more]
AT3G49010.1	4.312e-96	85.86	\| Symbols: ATBBC1, BBC1, RSU2 \| breast basic conse...	[more]
AT3G49010.4	5.270e-94	85.34	\| Symbols: ATBBC1, BBC1, RSU2 \| breast basic conse...	[more]
AT5G23900.1	2.214e-92	83.25	\| Symbols: \| Ribosomal protein L13e family protei...	[more]
AT3G48960.1	2.297e-81	74.87	\| Symbols: \| Ribosomal protein L13e family protei...	[more]
AT3G49010.5	1.003e-60	61.78	\| Symbols: ATBBC1, BBC1, RSU2 \| breast basic conse...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001380	Ribosomal protein L13e	PANTHER	PTHR11722	60S RIBOSOMAL PROTEIN L13	coord: 3..209 score: 7.9e
IPR001380	Ribosomal protein L13e	PFAM	PF01294	Ribosomal_L13e	coord: 8..186 score: 6.7
IPR018256	Ribosomal protein L13e, conserved site	PROSITE	PS01104	RIBOSOMAL_L13E	coord: 72..86 score
None	No IPR available	SEG	seg	seg	coord: 195..210 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT623078 ID=GT623078; Name=GT623078; organism=Lens culinaris; type=EST; length=835bp
CTCGAGTCAGAAGCAACCTTGCAGGTAAGGCGCCATGGTTAAGCACAACA
ATGTTATCCCCAATGAACATTTTAGGAAGCACTGGCAAAACTATGTGAAG
ACATGGTTTAATCAACCAGCAAGGAAGACCAGAAGACGATTGGCCCGTCA
GAAGAAGGCAGTTAAGATTTTCCCCAGGCCTACTGCTGGACCTCTTAGGC
CAATAGTTCACGGACAAACTGCCAAATACAACATGAAACTCCGAGCTGGT
AAAGGATTTTCTCTTGAAGAGTTGAAGGCTGCAGGTATTCCCAAGAAGCT
TGCTCCAACCATTGGCATTGCCATAGATCATCGCCGCAGGAACCGTTCCT
TGGAGGGTCTTCAAGCTAATGTTCAGAGGCTGAAGACATACAAGGCTAAG
TTGGTTGTTTTCCCAAGACGTGGTCGCAAGACCAAGGCTGGTGATTCTAC
ACCGGAAGAACTTGCAAATGCCACTCAAGTCCAAGGATCATACTTGCCCA
TTGTGAGGGAGAAGCCAGCTGTGGAACTTGTTAAGATCACTGATGAAATG
AAGGCATTCAAAGCTTATTACAAGCTCCGCCTTGAACGCACCAACAAGCG
TCACCTTGGTGCTAGGCTAAAGAGGGCTGCTGAAGCTGAAAAGGAAGAAA
GCAAGAAGTGATCTTGAGAACTCAGTTTATAATCTATTCATATGATAGTT
TTTTCAAGACAATTTTGTTCGAAATTAATTTTCTTCAGAACATGCCTAGT
TTAAGTGTTATCGAACCCTTTGCTTACTTATTTTGTGTACCATTACTCAA
GTTTGTTTTTTTTAGCAATTTGCATGTTTTGTATG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **INTERPRO**
Term	Definition
IPR001380	Ribosomal_eL13
IPR018256	Ribosomal_L13e_CS

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