GT623218

EST Overview


Name	GT623218
Unique Name	GT623218
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	805

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT623218 vs. TrEMBL
Match: B9RV94_RICCO (Signal recognition particle 54 kD protein, putative OS=Ricinus communis GN=RCOM_0901100 PE=4 SV=1)

HSP 1 Score: 493.812 bits (1270), Expect = 7.163e-138
Identity = 246/268 (91.79%), Postives = 252/268 (94.03%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQA+FNELC +LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SVAVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEG+FTLRIMYEQFQNILKM
Sbjct:   76 QQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: D7U153_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017362001 PE=4 SV=1)

HSP 1 Score: 490.73 bits (1262), Expect = 6.064e-137
Identity = 245/268 (91.42%), Postives = 251/268 (93.66%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQA+F ELC +LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEAT+PDLVIFVMDSSIG            SVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEG+FTLRIMYEQFQNILKM
Sbjct:   76 QQAIFQELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATRPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: B9IG64_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_257619 PE=4 SV=1)

HSP 1 Score: 490.345 bits (1261), Expect = 7.920e-137
Identity = 243/268 (90.67%), Postives = 251/268 (93.66%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQA+FNELC +LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQE ALFEEMRQV+EATKPDLVIFVMDSSIG            SVAVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEG+FTLRIMYEQFQN+LKM
Sbjct:   76 QQAIFNELCKMLDPGKPSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEVALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKM 343

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BLAST of GT623218 vs. TrEMBL
Match: C5XLK5_SORBI (Putative uncharacterized protein Sb03g036030 OS=Sorghum bicolor GN=Sb03g036030 PE=4 SV=1)

HSP 1 Score: 482.641 bits (1241), Expect = 1.651e-134
Identity = 242/268 (90.30%), Postives = 250/268 (93.28%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVP DQQPELLQ LSEG FTLR+MYEQFQNILKM
Sbjct:   76 QQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: B9GIF9_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_172222 PE=4 SV=1)

HSP 1 Score: 482.256 bits (1240), Expect = 2.157e-134
Identity = 241/268 (89.93%), Postives = 247/268 (92.16%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQA+FNELC ILDPGK SFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGVE F+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDL+IFVMDSSIG             VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEG+FTLRIMYEQFQN+LKM
Sbjct:   76 QQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLIIFVMDSSIGQAAFDQAQAFKQMVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKM 343

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BLAST of GT623218 vs. TrEMBL
Match: B4FSY4_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 480.33 bits (1235), Expect = 8.196e-134
Identity = 241/268 (89.93%), Postives = 249/268 (92.91%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELC +LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD +GFMDKIHEVVP DQQPELLQ LSEG FTLR+MYEQFQNILKM
Sbjct:   76 QQAVFTELCTMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCTKYAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDWAGFMDKIHEVVPTDQQPELLQKLSEGSFTLRLMYEQFQNILKM 343

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BLAST of GT623218 vs. TrEMBL
Match: Q8S1I8_ORYSJ (Os01g0772800 protein OS=Oryza sativa subsp. japonica GN=P0695H10.26 PE=2 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 1.070e-133
Identity = 240/268 (89.55%), Postives = 249/268 (92.91%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKPSFTPKKGK  VVMFVGLQGSGKTTTCTKYA+YHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEH+DEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVP DQQPELLQ LSEG FTLR+MYEQFQNILKM
Sbjct:   76 QQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: A9PHG6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 479.945 bits (1234), Expect = 1.070e-133
Identity = 240/268 (89.55%), Postives = 246/268 (91.79%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQA+FNELC ILDPGK SFTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIA EGVE F+KENCDLIIVDTSGRHKQEAAL EEMRQVSEATKPDL+IFVMDSSIG             VAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEG+FTLRIMYEQFQN+LKM
Sbjct:   76 QQAIFNELCKILDPGKSSFTPKKGKTSVVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAEEGVETFKKENCDLIIVDTSGRHKQEAALLEEMRQVSEATKPDLIIFVMDSSIGQAPFDQAQAFKQMVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGNFTLRIMYEQFQNLLKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: C4JC13_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 477.248 bits (1227), Expect = 6.938e-133
Identity = 237/268 (88.43%), Postives = 250/268 (93.28%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKPSFTPKKGK SVVMFVGLQGSGKTTTC+KYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEH+D+FEVFDVKPFVSRLLGMGD SGFMDKIHEV+P DQQP+LLQ LSEG F+LR+MYEQFQN+LKM
Sbjct:   76 QQAVFTELCNMLDPGKPSFTPKKGKPSVVMFVGLQGSGKTTTCSKYAYYHQKKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFEVFDVKPFVSRLLGMGDWSGFMDKIHEVIPTDQQPDLLQKLSEGSFSLRLMYEQFQNLLKM 343

[Close]

BLAST of GT623218 vs. TrEMBL
Match: B8AA60_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03915 PE=4 SV=1)

HSP 1 Score: 476.863 bits (1226), Expect = 9.062e-133
Identity = 239/268 (89.18%), Postives = 248/268 (92.54%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKPSFTPKKGK  VVMFVGLQGSGKTTTCTKYA+YHQ+KG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERF+KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIG            SV+VGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGE +DEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVP DQQPELLQ LSEG FTLR+MYEQFQNILKM
Sbjct:   76 QQAVFTELCNMLDPGKPSFTPKKGKPCVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVSVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGERIDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPTDQQPELLQKLSEGTFTLRLMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR542_SOLLC (Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 490.345 bits (1261), Expect = 5.173e-138
Identity = 244/268 (91.04%), Postives = 250/268 (93.28%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVFNELC ILDPGKPSFTPKKGK S+VMFVGLQGSGKTTTCTKYA+YHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAV+GVE F+KENCDLIIVDTSGRHKQEAALFEEMRQV+EATKPDLVIFVMDSSIG            SVAVGAVI+TKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGFMDKIHEVVPMDQQPELLQ LSEGHFTLRIMYEQFQNILKM
Sbjct:   76 QQAVFNELCKILDPGKPSFTPKKGKPSIVMFVGLQGSGKTTTCTKYAYYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVDGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIVTKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFMDKIHEVVPMDQQPELLQKLSEGHFTLRIMYEQFQNILKM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR541_SOLLC (Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 462.996 bits (1190), Expect = 8.845e-130
Identity = 233/269 (86.62%), Postives = 246/269 (91.45%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS-YMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAV+NELC ILDPGKP+FT KKGK SVVMFVGLQGSGKTTTCTKYA++HQK+GWKPALVCADTFRAGAFDQLKQNATKAKIPFYGS Y ESDPVKIAV+GVE F+KENCDLIIVDTSGRHKQEAALFEEMRQVSEA KPDLVIFVMDSSIG            SVAVGAVI+TKMDGHAKGGGALS VAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSG ++KI +VVPMDQQPELLQ LSEGHFTLRIMYEQFQ++LKM
Sbjct:   76 QQAVYNELCKILDPGKPAFTLKKGKPSVVMFVGLQGSGKTTTCTKYAYHHQKRGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSSYTESDPVKIAVDGVETFKKENCDLIIVDTSGRHKQEAALFEEMRQVSEAQKPDLVIFVMDSSIGQAAFDQAQAFRQSVAVGAVIVTKMDGHAKGGGALSRVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGLVNKIQDVVPMDQQPELLQKLSEGHFTLRIMYEQFQSMLKM 344

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR543_ARATH (Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana GN=SRP-54C PE=2 SV=2)

HSP 1 Score: 461.455 bits (1186), Expect = 2.573e-129
Identity = 228/268 (85.07%), Postives = 246/268 (91.79%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F+ELC +LDPGKP+F PKK KASVVMFVGLQG+GKTTTCTKYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ F+KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIG            SVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGF+DK+ EVVP DQQPELL+ LS+G+FTLRIMY+QFQNIL M
Sbjct:   76 EQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR542_HORVU (Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare GN=SRP54-2 PE=2 SV=1)

HSP 1 Score: 459.144 bits (1180), Expect = 1.277e-128
Identity = 226/268 (84.33%), Postives = 245/268 (91.42%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKP+FTPKKGK SVVMFVGLQGSGKTTTCTKYA+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEG+ERFRKEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIG            S +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGDLSG MDKI +V+P DQQPELL  L+EG FTLR++YEQFQN+LKM
Sbjct:   76 QQAVFTELCNMLDPGKPAFTPKKGKPSVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR541_HORVU (Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare GN=SRP54-1 PE=2 SV=1)

HSP 1 Score: 456.062 bits (1172), Expect = 1.081e-127
Identity = 225/268 (83.96%), Postives = 244/268 (91.04%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            QQAVF ELCN+LDPGKP+FT KKGK SVVMFVGLQGSGKTTTCTKYA+YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEG+ERFRKEN DLII+DTSGRHKQEAALFEEMRQV+EATKPDLVIFVMD SIG            S +VGAVIITK+DGHAKGGGALSAVAATKSPVIFIGTGEH+DEFE+FDVKPFVSRLLGMGDLSG MDKI +V+P DQQPELL  L+EG FTLR++YEQFQN+LKM
Sbjct:   76 QQAVFTELCNMLDPGKPAFTTKKGKPSVVMFVGLQGSGKTTTCTKYAYYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLERFRKENSDLIIIDTSGRHKQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIITKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDEFEIFDVKPFVSRLLGMGDLSGLMDKIQDVMPADQQPELLAKLAEGTFTLRLLYEQFQNLLKM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR542_ARATH (Signal recognition particle 54 kDa protein 2 OS=Arabidopsis thaliana GN=SRP-54B PE=2 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 2.493e-124
Identity = 218/268 (81.34%), Postives = 240/268 (89.55%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F+ELC +LDPGK +F PKK K  VVMFVGLQGSGKTTTCTKYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSY  SDPVKIAVEGV+RF+KENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIG            +VAVGAVIITKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG GD+SGF++K+ EVVP DQQPELL+MLS G FTLRIMY+QFQN+L M
Sbjct:   76 EQAIFSELCKMLDPGKSAFAPKKAKPRVVMFVGLQGSGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNM 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR541_ARATH (Signal recognition particle 54 kDa protein 1 OS=Arabidopsis thaliana GN=SRP-54A PE=2 SV=1)

HSP 1 Score: 428.713 bits (1101), Expect = 1.849e-119
Identity = 213/268 (79.48%), Postives = 236/268 (88.06%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F ELC +LDPGKP+F PKK K SVVMFVGLQG+GKTTTCTKYA+YHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+RF+KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIG            +V+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD SG +DK+ EVVP D Q EL++ LS+G+FTLR MY+QFQ  L++
Sbjct:   76 EQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI 343

[Close]

BLAST of GT623218 vs. SwissProt
Match: SR543_HORVU (Signal recognition particle 54 kDa protein 3 OS=Hordeum vulgare GN=SRP54-3 PE=2 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 7.269e-116
Identity = 204/268 (76.12%), Postives = 233/268 (86.94%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            + +V  ELC +LD GKP+F PKKGK +VVMFVGLQGSGKTTTCTKYA YHQ+KG+KP+LVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEG+E+FR+E  DLII+DTSGRH QEAALFEEMRQV+EATKPDLVIFVMD SIG            S +VGAVI+TK+DGHAKGGGALSAVAATKSPVIFIGTGEH+D+F+VF+V+PFV+RLLG GDL G +DK+  +VP DQQ EL+  LSEG FTLR++YEQFQN+LKM
Sbjct:   75 ETSVGKELCKMLDTGKPAFVPKKGKPNVVMFVGLQGSGKTTTCTKYAHYHQRKGFKPSLVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGLEKFRQEKSDLIIIDTSGRHMQEAALFEEMRQVAEATKPDLVIFVMDGSIGQAAFDQAQAFKQSASVGAVIVTKLDGHAKGGGALSAVAATKSPVIFIGTGEHIDDFDVFNVEPFVARLLGRGDLPGLIDKMESIVPADQQSELVAKLSEGAFTLRLLYEQFQNLLKM 342

[Close]

BLAST of GT623218 vs. SwissProt
Match: SRP54_GEOCY (Signal recognition particle 54 kDa protein OS=Geodia cydonium GN=SRP54 PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 1.922e-100
Identity = 178/268 (66.42%), Postives = 215/268 (80.22%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            Q +VFNELC +LDPG P + P KG ++V+MFVGLQGSGKTTTCTK A+++QKKGWK  LVCADTFRAGAFDQLKQNATKA++PFYGSY E DPV IA EGVE+F++++ ++IIVDTSGRHKQE +LFEEM QVS+A  PD +IFVMD +IG             V V +VI+TK+DGHAKGGGALSAVAAT+SP+IFIGTGEH+DE E F  KPFVS+LLGMGDL G M+K+ + + +D+  EL+  L  G FTLR MYEQFQNI+KM
Sbjct:   75 QTSVFNELCKLLDPGVPVWHPTKGHSNVIMFVGLQGSGKTTTCTKLAYHYQKKGWKTCLVCADTFRAGAFDQLKQNATKARVPFYGSYTEMDPVVIAQEGVEKFKEDSFEVIIVDTSGRHKQEESLFEEMLQVSQAIDPDNIIFVMDGTIGQACESQARAFKEKVDVASVIVTKLDGHAKGGGALSAVAATRSPIIFIGTGEHIDEMEPFKTKPFVSKLLGMGDLEGLMEKVSD-LKLDENEELMDKLKHGQFTLRDMYEQFQNIMKM 341

[Close]

BLAST of GT623218 vs. SwissProt
Match: SRP54_MOUSE (Signal recognition particle 54 kDa protein OS=Mus musculus GN=Srp54 PE=1 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 1.246e-99
Identity = 175/268 (65.30%), Postives = 215/268 (80.22%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            Q AVF EL  ++DPG  ++TP KGK +V+MFVGLQGSGKTTTC+K A+Y+Q+KGWK  L+CADTFRAGAFDQLKQNATKA+IPFYGSY E DPV IA EGVE+F+ EN ++IIVDTSGRHKQE +LFEEM QVS A +PD +++VMD+SIG             V V +VI+TK+DGHAKGGGALSAVAATKSP+IFIGTGEH+D+FE F  +PF+S+LLGMGD+ G +DK++E + +D    L++ L  G FTLR MYEQFQNI+KM
Sbjct:   76 QHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNE-LKLDDNEALIEKLKHGQFTLRDMYEQFQNIMKM 342

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT1G48900.2 (| Symbols: | Signal recognition particle, SRP54 subunit protein | chr1:18085031-18087743 REVERSE LENGTH=431)

HSP 1 Score: 461.455 bits (1186), Expect = 2.526e-130
Identity = 228/268 (85.07%), Postives = 246/268 (91.79%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F+ELC +LDPGKP+F PKK KASVVMFVGLQG+GKTTTCTKYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ F+KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIG            SVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGF+DK+ EVVP DQQPELL+ LS+G+FTLRIMY+QFQNIL M
Sbjct:   76 EQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNM 343

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT1G48900.1 (| Symbols: | Signal recognition particle, SRP54 subunit protein | chr1:18084972-18087743 REVERSE LENGTH=495)

HSP 1 Score: 461.455 bits (1186), Expect = 2.526e-130
Identity = 228/268 (85.07%), Postives = 246/268 (91.79%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F+ELC +LDPGKP+F PKK KASVVMFVGLQG+GKTTTCTKYA+YHQKKG+KPALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+ F+KENCDLIIVDTSGRHKQEA+LFEEMRQV+EATKPDLVIFVMDSSIG            SVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGD SGF+DK+ EVVP DQQPELL+ LS+G+FTLRIMY+QFQNIL M
Sbjct:   76 EQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGYKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVDTSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDWSGFVDKLQEVVPKDQQPELLEKLSQGNFTLRIMYDQFQNILNM 343

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT1G15310.1 (| Symbols: ATHSRP54A, SRP54-1 | signal recognition particle 54 kDa subunit | chr1:5269173-5271947 REVERSE LENGTH=479)

HSP 1 Score: 428.713 bits (1101), Expect = 1.815e-120
Identity = 213/268 (79.48%), Postives = 236/268 (88.06%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F ELC +LDPGKP+F PKK K SVVMFVGLQG+GKTTTCTKYA+YHQKKG+K ALVCADTFRAGAFDQLKQNATKAKIPFYGSY ESDPVKIAVEGV+RF+KE CDLIIVDTSGRHKQ A+LFEEMRQV+EAT+PDLVIFVMDSSIG            +V+VGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLG GD SG +DK+ EVVP D Q EL++ LS+G+FTLR MY+QFQ  L++
Sbjct:   76 EQAIFKELCRMLDPGKPAFAPKKAKPSVVMFVGLQGAGKTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQAEAFKETVSVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGKGDWSGLVDKLQEVVPKDLQNELVENLSQGNFTLRSMYDQFQCSLRI 343

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT5G49500.1 (| Symbols: | Signal recognition particle, SRP54 subunit protein | chr5:20077556-20080206 REVERSE LENGTH=497)

HSP 1 Score: 405.986 bits (1042), Expect = 1.260e-113
Identity = 205/270 (75.93%), Postives = 228/270 (84.44%), Query Frame = 2

Query:    2 QQAVFNELCNILDPGKPSFTPKKGKASVVMFVGLQGS--GKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            +QA+F+ELC +LDPGK +F PKK K SVVMFVGLQG    K           ++KG+KPALVCADTFRAGAFDQLKQNATK+KIP+YGSY  SDPVKIAVEGV+RF+KENCDLIIVDTSGRHKQ+A+LFEEMRQ+SEATKPDLVIFVMDSSIG            +VAVGAVIITKMDGHAKGGG LSAVAATKSPVIFIGTGEHMDEFEVFD KPFVSRLLG GD+SGF++K+ EVVP DQQPELL+MLS G FTLRIMY+QFQN+L M
Sbjct:   76 EQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIIIRRKGYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSGRHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGGTLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEMLSHGKFTLRIMYDQFQNMLNM 345

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT5G03940.1 (| Symbols: FFC, 54CP, CPSRP54, SRP54CP | chloroplast signal recognition particle 54 kDa subunit | chr5:1060265-1063257 REVERSE LENGTH=564)

HSP 1 Score: 149.443 bits (376), Expect = 2.125e-36
Identity = 79/265 (29.81%), Postives = 134/265 (50.57%), Query Frame = 2

Query:   11 VFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLLGMGDLSGFMDKIHEVVPMDQQPELLQMLSEGHFTLRIMYEQFQNILKM 805
            V +EL  ++          K   +V++  GLQG GKTT C K A Y +K+G    L+  D +R  A DQL     +  +P Y +  +  P  IA +G++  +K N D++I+DT+GR + +  + +E++ V +   P  V+ V+D+  G             + +   I+TK+DG ++GG ALS    +  P+  +G GE M++ E F       R+LGMGD+  F++K  EV+  +   +L + +    F      +Q + + KM
Sbjct:  154 VHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKM 418

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT4G30600.1 (| Symbols: | signal recognition particle receptor alpha subunit family protein | chr4:14938142-14940600 REVERSE LENGTH=634)

HSP 1 Score: 110.923 bits (276), Expect = 8.375e-25
Identity = 63/207 (30.43%), Postives = 107/207 (51.69%), Query Frame = 2

Query:   74 KASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGXXXXXXXXXXXXSVA----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 661
            K  VV+FVG+ G GK+T   K A++ Q+      +   DTFR+GA +QL+ +A + +IP +    E DP  +A E ++   +   D+++VDT+GR +    L   + ++    +PDLV+FV ++ +G             ++          +  +++TK D    K G ALS V  + SPV+F+G G+   + +  +VK  V  LL
Sbjct:  427 KPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNQPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALSMVYISGSPVMFVGCGQSYTDLKKLNVKAIVKTLL 633

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT2G45770.1 (| Symbols: CPFTSY, FRD4 | signal recognition particle receptor protein, chloroplast (FTSY) | chr2:18851248-18853402 FORWARD LENGTH=366)

HSP 1 Score: 104.76 bits (260), Expect = 6.002e-23
Identity = 67/204 (32.84%), Postives = 105/204 (51.47%), Query Frame = 2

Query:   74 KASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAV---EGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEAT------KPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 658
            K +V+M VG+ G GKTT+  K A   + +G K  +   DTFRA A DQL+  A +       +  E D  K A    + V+R ++E  D+++ DTSGR     +L EE+    +A        P+ ++ V+D + G             V +  +I+TK+DG A+GG  +S V     PV FIG GE +++ + FD + FV+ +
Sbjct:  163 KPAVIMIVGVNGGGKTTSLGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVA--EGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAI 364

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT2G45770.2 (| Symbols: CPFTSY | signal recognition particle receptor protein, chloroplast (FTSY) | chr2:18851248-18853402 FORWARD LENGTH=373)

HSP 1 Score: 98.2117 bits (243), Expect = 5.618e-21
Identity = 67/211 (31.75%), Postives = 105/211 (49.76%), Query Frame = 2

Query:   74 KASVVMFVGLQGSGKTTTCT-------KYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAV---EGVERFRKENCDLIIVDTSGRHKQEAALFEEMRQVSEAT------KPDLVIFVMDSSIGXXXXXXXXXXXXSVAVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRL 658
            K +V+M VG+ G GKTT+         K A   + +G K  +   DTFRA A DQL+  A +       +  E D  K A    + V+R ++E  D+++ DTSGR     +L EE+    +A        P+ ++ V+D + G             V +  +I+TK+DG A+GG  +S V     PV FIG GE +++ + FD + FV+ +
Sbjct:  163 KPAVIMIVGVNGGGKTTSLDSGFCFSGKLAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVA--EGDKAKAATVLSKAVKRGKEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQAREFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNAI 371

[Close]

BLAST of GT623218 vs. TAIR peptide
Match: AT5G66970.1 (| Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:26740445-26741125 REVERSE LENGTH=175)

HSP 1 Score: 90.1225 bits (222), Expect = 1.530e-18
Identity = 45/93 (48.39%), Postives = 63/93 (67.74%), Query Frame = 2

Query:   11 VFNELCNILDPGKPSFTPKKGKASVVMFVGLQGSGKTTTCTKYAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKI 289
            +  EL + LDPGK +    K + S+VMF+GL+G  KT TC KYA YH+KKG++PALVCADTF+  AF +L + A K ++P Y  Y+  +  K+
Sbjct:   77 MLQELSSKLDPGKSALIRGKLEPSIVMFIGLRGVDKTKTCAKYARYHRKKGFRPALVCADTFKFDAFVRLNK-AAKDEVPVYARYIYIEYFKL 168

The following BLAST results are available for this feature:

BLAST of GT623218 vs. TrEMBL
BLAST of GT623218 vs. SwissProt
BLAST of GT623218 vs. TAIR peptide

BLAST of GT623218 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B9RV94_RICCO	7.163e-138	91.79	Signal recognition particle 54 kD protein, putativ...	[more]
D7U153_VITVI	6.064e-137	91.42	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9IG64_POPTR	7.920e-137	90.67	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
C5XLK5_SORBI	1.651e-134	90.30	Putative uncharacterized protein Sb03g036030 OS=So...	[more]
B9GIF9_POPTR	2.157e-134	89.93	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
B4FSY4_MAIZE	8.196e-134	89.93	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
Q8S1I8_ORYSJ	1.070e-133	89.55	Os01g0772800 protein OS=Oryza sativa subsp. japoni...	[more]
A9PHG6_POPTR	1.070e-133	89.55	Putative uncharacterized protein OS=Populus tricho...	[more]
C4JC13_MAIZE	6.938e-133	88.43	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B8AA60_ORYSI	9.062e-133	89.18	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GT623218 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
SR542_SOLLC	5.173e-138	91.04	Signal recognition particle 54 kDa protein 2 OS=So...	[more]
SR541_SOLLC	8.845e-130	86.62	Signal recognition particle 54 kDa protein 1 OS=So...	[more]
SR543_ARATH	2.573e-129	85.07	Signal recognition particle 54 kDa protein 3 OS=Ar...	[more]
SR542_HORVU	1.277e-128	84.33	Signal recognition particle 54 kDa protein 2 OS=Ho...	[more]
SR541_HORVU	1.081e-127	83.96	Signal recognition particle 54 kDa protein 1 OS=Ho...	[more]
SR542_ARATH	2.493e-124	81.34	Signal recognition particle 54 kDa protein 2 OS=Ar...	[more]
SR541_ARATH	1.849e-119	79.48	Signal recognition particle 54 kDa protein 1 OS=Ar...	[more]
SR543_HORVU	7.269e-116	76.12	Signal recognition particle 54 kDa protein 3 OS=Ho...	[more]
SRP54_GEOCY	1.922e-100	66.42	Signal recognition particle 54 kDa protein OS=Geod...	[more]
SRP54_MOUSE	1.246e-99	65.30	Signal recognition particle 54 kDa protein OS=Mus ...	[more]

BLAST of GT623218 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 9


Match Name	E-value	Identity	Description
AT1G48900.2	2.526e-130	85.07	\| Symbols: \| Signal recognition particle, SRP54 s...	[more]
AT1G48900.1	2.526e-130	85.07	\| Symbols: \| Signal recognition particle, SRP54 s...	[more]
AT1G15310.1	1.815e-120	79.48	\| Symbols: ATHSRP54A, SRP54-1 \| signal recognition...	[more]
AT5G49500.1	1.260e-113	75.93	\| Symbols: \| Signal recognition particle, SRP54 s...	[more]
AT5G03940.1	2.125e-36	29.81	\| Symbols: FFC, 54CP, CPSRP54, SRP54CP \| chloropla...	[more]
AT4G30600.1	8.375e-25	30.43	\| Symbols: \| signal recognition particle receptor...	[more]
AT2G45770.1	6.002e-23	32.84	\| Symbols: CPFTSY, FRD4 \| signal recognition parti...	[more]
AT2G45770.2	5.618e-21	31.75	\| Symbols: CPFTSY \| signal recognition particle re...	[more]
AT5G66970.1	1.530e-18	48.39	\| Symbols: \| P-loop containing nucleoside triphos...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000897	Signal recognition particle, SRP54 subunit, GTPase	PFAM	PF00448	SRP54	coord: 27..221 score: 5.4
IPR000897	Signal recognition particle, SRP54 subunit, GTPase	SMART	SM00962	no description	coord: 26..221 score: 2.3
IPR000897	Signal recognition particle, SRP54 subunit, GTPase	PROSITE	PS00300	SRP54	coord: 194..207 score
IPR003593	ATPase, AAA+ type, core	SMART	SM00382	no description	coord: 25..202 score: 0.0
IPR004125	Signal recognition particle, SRP54 subunit, M-domain	SUPERFAMILY	47446	Signal peptide-binding domain	coord: 223..268 score: 2.7
None	No IPR available	GENE3D	3.40.50.300	no description	coord: 21..222 score: 1
None	No IPR available	PANTHER	PTHR11564	GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS	coord: 1..268 score: 1.8e
None	No IPR available	PANTHER	PTHR11564:SF5	SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN	coord: 1..268 score: 1.8e
None	No IPR available	SEG	seg	seg	coord: 152..163 score
None	No IPR available	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 18..223 score: 3.7
None	No IPR available	SEG	seg	seg	coord: 10..24 score: NAcoord: 67..82 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT623218 ID=GT623218; Name=GT623218; organism=Lens culinaris; type=EST; length=805bp
CCAACAAGCTGTGTTCAATGAACTCTGCAATATCTTGGATCCTGGAAAGC
CTTCTTTCACTCCCAAAAAGGGAAAAGCTAGTGTTGTCATGTTCGTTGGT
TTACAAGGATCTGGGAAAACCACTACTTGTACAAAATATGCATTTTATCA
TCAAAAGAAAGGCTGGAAGCCGGCTCTAGTATGTGCTGATACATTCAGAG
CTGGTGCGTTTGATCAGTTGAAGCAAAATGCTACTAAAGCTAAGATCCCT
TTCTATGGAAGCTATATGGAGTCAGATCCTGTGAAAATTGCCGTGGAAGG
TGTGGAAAGATTCAGGAAAGAAAACTGCGATCTTATAATTGTTGATACTA
GTGGAAGGCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGCCAAGTT
TCAGAAGCAACGAAACCAGATCTTGTTATCTTTGTCATGGATAGCAGTAT
CGGTCAGGCTGCTTTTGATCAGGCTCAAGCATTTAAACAGAGTGTTGCAG
TTGGAGCTGTCATTATCACTAAAATGGATGGCCATGCAAAGGGTGGTGGT
GCACTTAGTGCTGTTGCGGCTACAAAGAGTCCTGTCATATTCATTGGAAC
TGGAGAACACATGGATGAATTTGAAGTTTTTGATGTTAAGCCATTTGTCA
GTCGTCTATTAGGCATGGGAGACTTGTCTGGGTTCATGGACAAAATCCAT
GAAGTCGTTCCTATGGATCAACAACCTGAACTGCTTCAAATGCTGTCAGA
AGGACACTTTACCTTGAGGATTATGTACGAGCAGTTTCAGAATATTCTTA
AAATG

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding
GO:0000166	nucleotide binding
GO:0017111	ribonucleoside triphosphate phosphatase activity
GO:0008312	7S RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006614	SRP-dependent cotranslational protein targeting to membrane

Vocabulary: **Cellular Component**
Term	Definition
GO:0048500	signal recognition particle

Vocabulary: **INTERPRO**
Term	Definition
IPR000897	SRP54_GTPase_dom
IPR003593	AAA+_ATPase
IPR004125	Signal_recog_particle_SRP54_M

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