GT626082

EST Overview


Name	GT626082
Unique Name	GT626082
Type	EST
Organism	Lens culinaris (lentil)
Sequence length	771

Libraries


Library Name	Type
LIBEST_025390 LCUSE1NG	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
Lens culinaris unigene v1	Lens culinaris unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Lens culinaris unigene v1	2010-12-27
Homology Analysis: Lens culinaris unigene v1 vs Trembl	2010-12-28
Homology Analysis: Lens culinaris unigene v1 vs Swissprot	2010-12-28
KEGG analysis for Lens culinaris unigene v1	2011-01-05
Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide	2011-02-03
InterProScan analysis for Lens culinaris unigene v1	2011-01-06

Homology

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BLAST of GT626082 vs. TrEMBL
Match: B7FIJ2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 7.700e-70
Identity = 141/176 (80.11%), Postives = 152/176 (86.36%), Query Frame = 2

Query:   71 ADTENPPST-SLISQTTHTHEDDNQFKNTNSTNNATIAKNKXXXXXXXXXNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            A TENP ST S + Q+T THE+++    T ++NN TI K+K         NMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLL SITGTQKISIPITIAVSGIAKVFVGEVVETAR +MKERKE+GPIRPCHLREAHRRLKLEGK+FKRTTSRLFR
Sbjct:   29 ASTENPNSTNSSLPQSTLTHEEEHNHIKTPNSNN-TITKHKDEEDDEEEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLTSITGTQKISIPITIAVSGIAKVFVGEVVETARTIMKERKETGPIRPCHLREAHRRLKLEGKIFKRTTSRLFR 203

[Close]

BLAST of GT626082 vs. TrEMBL
Match: C6SV90_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 1.043e-58
Identity = 115/126 (91.27%), Postives = 123/126 (97.62%), Query Frame = 2

Query:  218 NMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            NMDVELAK P+ GDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKIS+P+TI VSGIAK+FVGEVVETAR+VMKERKESGPIRPCHLREA+RRLKLEGKVFKR++SRLFR
Sbjct:   30 NMDVELAKLPSTGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISVPMTIVVSGIAKMFVGEVVETARIVMKERKESGPIRPCHLREAYRRLKLEGKVFKRSSSRLFR 155

[Close]

BLAST of GT626082 vs. TrEMBL
Match: D7TQZ4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_93.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00038073001 PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.659e-54
Identity = 109/148 (73.65%), Postives = 124/148 (83.78%), Query Frame = 2

Query:  152 TNSTNNATIAKNKXXXXXXXXXNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            ++ T     AK+K         NMDVEL K PT+GDPHKMAKMQAILSQFTEEQMSRYESFRR+GFQKANMK+LL SITG+QKIS P+TI  SGIAK+FVGE+VETARMVM ERKE+GPIRPCH+REA+RRLKLEGKV +R+ SRLFR
Sbjct:   51 SSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGSQKISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRRSVSRLFR 198

[Close]

BLAST of GT626082 vs. TrEMBL
Match: B9T387_RICCO (Transcription initiation factor TFIID subunit, putative OS=Ricinus communis GN=RCOM_0096320 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.972e-49
Identity = 99/126 (78.57%), Postives = 113/126 (89.68%), Query Frame = 2

Query:  218 NMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            N+DVELAKFP+  DP KMAKMQAILSQFTE QM+RYESFRR+  QKANM+RLL SITG+QKIS+P+TI V GIAK+FVGE+VETAR+VM ERKESGPIRPCH+REA+RRLKLEGKV KR+  RLFR
Sbjct:   80 NVDVELAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 205

[Close]

BLAST of GT626082 vs. TrEMBL
Match: B9GMZ1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_838144 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.180e-48
Identity = 100/139 (71.94%), Postives = 113/139 (81.29%), Query Frame = 2

Query:  179 AKNKXXXXXXXXXNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            AKNK         NMDVEL+K  +  DP KMAKMQ IL+QFTE QMSRYESFRR+  QK NMKRLL SITG+QKIS+P+TI V GIAK+FVGE+VETAR+VM ERKESGPIRPCH+REA+RRLKLEGKV KR+  RLFR
Sbjct:   84 AKNKDDDEEEEEDNMDVELSKLASTADPDKMAKMQTILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 222

[Close]

BLAST of GT626082 vs. TrEMBL
Match: D7MFL1_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_658071 PE=4 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 5.370e-47
Identity = 99/165 (60.00%), Postives = 121/165 (73.33%), Query Frame = 2

Query:  122 THEDDNQ-------FKNTNSTNNATIAKNKXXXXXXXXXNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            T E+D +        K   ++   T AKNK         NM+VEL K+PT+ DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  +TG+QKI +P+ I V GIAK+FVGE+VETAR+VM ERKESGPIRPCH+RE++RRLKLEGKV KR+  RLFR
Sbjct:   47 TQEEDERPVDVRRPMKKAKTSVVVTEAKNKDEDDEEEEENMEVELTKYPTSSDPAKMAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVVCGIAKMFVGELVETARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 211

[Close]

BLAST of GT626082 vs. TrEMBL
Match: B6UGD0_MAIZE (Transcription initiation factor TFIID subunit 11 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 9.159e-47
Identity = 93/126 (73.81%), Postives = 115/126 (91.27%), Query Frame = 2

Query:  221 MDVELAKFPTA-GDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            M+V+L K P++ GDP K+AKM AILSQFT++QM+RYESFRR+GFQK+NMKRLLASITG+QKISIP +I VSGIAK+FVGE++ETAR+VM ERK+SGPIRPCH+REA+RRLKLEGK+ +R+  RLFR
Sbjct:   80 MEVDLDKLPSSTGDPDKLAKMNAILSQFTQQQMNRYESFRRSGFQKSNMKRLLASITGSQKISIPTSIVVSGIAKIFVGELIETARVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 205

[Close]

BLAST of GT626082 vs. TrEMBL
Match: Q5QMA1_ORYSJ (Os01g0680400 protein OS=Oryza sativa subsp. japonica GN=B1144G04.51 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.040e-46
Identity = 93/127 (73.23%), Postives = 114/127 (89.76%), Query Frame = 2

Query:  218 NMDVELAKFPTA-GDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            +M+V+L K P+   DP K+AKM AILSQFTE+QM+RYESFRR+GFQK+NMK+LLASITG+QKIS+P TI VSGIAK+FVGE+VETAR+VM ERK+SGP+RPCH+REA+RRLKLEGK+ +RT  RLFR
Sbjct:   85 HMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMNRYESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 211

[Close]

BLAST of GT626082 vs. TrEMBL
Match: C0P9B6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.040e-46
Identity = 92/126 (73.02%), Postives = 115/126 (91.27%), Query Frame = 2

Query:  221 MDVELAKFPTA-GDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            ++V+L K P++ GDP K+AKM AILSQFT++QM+RYESFRR+GFQK+NMKRLLASITG+QKISIP +I VSGIAK+FVGE++ETAR+VM ERK+SGPIRPCH+REA+RRLKLEGK+ +R+  RLFR
Sbjct:   78 IEVDLEKLPSSTGDPDKLAKMNAILSQFTQQQMNRYESFRRSGFQKSNMKRLLASITGSQKISIPTSIVVSGIAKIFVGELIETARVVMSERKDSGPIRPCHIREAYRRLKLEGKIPRRSVPRLFR 203

[Close]

BLAST of GT626082 vs. TrEMBL
Match: B8A7K9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03273 PE=4 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 2.040e-46
Identity = 93/127 (73.23%), Postives = 114/127 (89.76%), Query Frame = 2

Query:  218 NMDVELAKFPTA-GDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            +M+V+L K P+   DP K+AKM AILSQFTE+QM+RYESFRR+GFQK+NMK+LLASITG+QKIS+P TI VSGIAK+FVGE+VETAR+VM ERK+SGP+RPCH+REA+RRLKLEGK+ +RT  RLFR
Sbjct:   84 HMEVDLDKLPSGTSDPDKLAKMNAILSQFTEDQMNRYESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVMTERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 210

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_MOUSE (Transcription initiation factor TFIID subunit 11 OS=Mus musculus GN=Taf11 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.611e-22
Identity = 54/103 (52.43%), Postives = 78/103 (75.73%), Query Frame = 2

Query:  257 DPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKV 565
            D  ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SITGT  +S  + IA+SGI+KVFVGEVVE A  V ++  E+ P++P H+REA RRLK +G++
Sbjct:   99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTS-VSQNVVIAMSGISKVFVGEVVEEALDVCEKWGETPPLQPKHMREAVRRLKSKGQI 200

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_RAT (Transcription initiation factor TFIID subunit 11 OS=Rattus norvegicus GN=Taf11 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.639e-21
Identity = 54/103 (52.43%), Postives = 77/103 (74.76%), Query Frame = 2

Query:  257 DPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKV 565
            D  ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SITGT  +S  + IA+SGI+KVFVGEVVE A  V ++  E  P++P H+REA RRLK +G++
Sbjct:   99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTS-VSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQI 200

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_PONAB (Transcription initiation factor TFIID subunit 11 OS=Pongo abelii GN=TAF11 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.639e-21
Identity = 54/103 (52.43%), Postives = 77/103 (74.76%), Query Frame = 2

Query:  257 DPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKV 565
            D  ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SITGT  +S  + IA+SGI+KVFVGEVVE A  V ++  E  P++P H+REA RRLK +G++
Sbjct:   99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTS-VSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQI 200

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_HUMAN (Transcription initiation factor TFIID subunit 11 OS=Homo sapiens GN=TAF11 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.639e-21
Identity = 54/103 (52.43%), Postives = 77/103 (74.76%), Query Frame = 2

Query:  257 DPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKV 565
            D  ++ KMQ ++S F+EEQ++RYE +RR+ F KA +KRL+ SITGT  +S  + IA+SGI+KVFVGEVVE A  V ++  E  P++P H+REA RRLK +G++
Sbjct:   99 DEDEIQKMQILVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGTS-VSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMREAVRRLKSKGQI 200

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_DROME (Transcription initiation factor TFIID subunit 11 OS=Drosophila melanogaster GN=Taf11 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.175e-19
Identity = 51/97 (52.58%), Postives = 72/97 (74.23%), Query Frame = 2

Query:  275 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKV 565
            +MQ ++S FTEEQ+ RYE +RR+ F KA +KRL+ +ITG   +S  + IA+SGIAKVFVGEVVE A  VM+ + ESG ++P  +REA RRL+ + ++
Sbjct:   88 RMQVLVSNFTEEQLDRYEMYRRSAFPKAAVKRLMQTITGCS-VSQNVVIAMSGIAKVFVGEVVEEALDVMEAQGESGALQPKFIREAVRRLRTKDRM 183

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_DICDI (Transcription initiation factor TFIID subunit 11 OS=Dictyostelium discoideum GN=taf11 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.831e-19
Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2

Query:  275 KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLK 550
            +M  ++  F+E+Q +R+E ++R+ FQ+AN+K+++ S+     ++    I + GIAKVFVGE+VE AR +M+E +E+GPIRP H+REA+RRLK
Sbjct:  343 QMNTLIKHFSEDQQTRFEYYKRSSFQRANIKKVMQSVLSAP-VNQTSAIVMGGIAKVFVGEIVELARSIMEEWRETGPIRPRHIREAYRRLK 433

[Close]

BLAST of GT626082 vs. SwissProt
Match: YE016_HUMAN (Putative TAF11-like protein ENSP00000332601 OS=Homo sapiens PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.128e-17
Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 2

Query:  257 DPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEG 559
            D  +  +M  +LS  +EEQ+SRYE  RR+ F KA +  L+ SITG + +S  + IA++GIAKVFVGEVVE A  V +   E  P++P HLREA RRLK +G
Sbjct:   87 DAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPKACIAGLMRSITG-RSVSENVAIAMAGIAKVFVGEVVEEALDVCEMWGEMPPLQPKHLREAVRRLKPKG 186

[Close]

BLAST of GT626082 vs. SwissProt
Match: TAF11_SCHPO (Transcription initiation factor TFIID subunit 11 OS=Schizosaccharomyces pombe GN=taf11 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.128e-17
Identity = 47/118 (39.83%), Postives = 71/118 (60.17%), Query Frame = 2

Query:  248 TAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVF--KRTTSRLFR 595
            T  + ++  + + +L  F EEQM RYE FRRA   K N+K+L   I   Q ++  + I +SG +KVFVGE+VE AR +  +  ++GP+ P HLREA+R  +   +++   R  S LFR
Sbjct:   83 TDDEANEKLRTKYLLESFDEEQMQRYEVFRRANLNKTNVKKLANQILN-QSVTPNVAIVISGFSKVFVGEIVELARKIQDQWGDTGPLSPDHLREAYRLSRQNRRLYPQSRHVSHLFR 199

[Close]

BLAST of GT626082 vs. TAIR peptide
Match: AT4G20280.1 (| Symbols: TAF11 | TBP-associated factor 11 | chr4:10953792-10954664 FORWARD LENGTH=210)

HSP 1 Score: 186.808 bits (473), Expect = 1.126e-47
Identity = 92/138 (66.67%), Postives = 110/138 (79.71%), Query Frame = 2

Query:  182 KNKXXXXXXXXXNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            K+K         NMDVEL K+PT+ DP KMAKMQ ILSQFTE+QMSRYESFRR+  Q+  MK+LL  +TG+QKI +P+ I   GIAK+FVGE+VETAR+VM ERKESGPIRPCH+RE++RRLKLEGKV KR+  RLFR
Sbjct:   73 KDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTILSQFTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETARVVMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210

[Close]

BLAST of GT626082 vs. TAIR peptide
Match: AT1G20000.1 (| Symbols: TAF11b | TBP-associated factor 11B | chr1:6936898-6937666 REVERSE LENGTH=204)

HSP 1 Score: 159.844 bits (403), Expect = 1.475e-39
Identity = 89/163 (54.60%), Postives = 113/163 (69.33%), Query Frame = 2

Query:  110 QTTHTHEDDNQFKNTNSTNNATIAKNKXXXXXXXXXNMDVELAKFPTAGDPHKMA-KMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASITGTQKISIPITIAVSGIAKVFVGEVVETARMVMKERKESGPIRPCHLREAHRRLKLEGKVFKRTTSRLFR 595
            +T  T E D +      T+    AKNK           +VE  K  T  DP   A KMQ ILSQFTEEQMSRYESFRR+GF+K++M++L+  ITG  K+   + I V GIAK+FVG++VETAR+VM+ERKESGPIRPCH+RE++RRLKL+GKV +R+  RLFR
Sbjct:   52 ETEQTLEGDERAVKKCKTSVVAEAKNKD----------EVEFTKNITGADPVTRANKMQKILSQFTEEQMSRYESFRRSGFKKSDMEKLVQRITGGPKMDDTMNIVVRGIAKMFVGDLVETARVVMRERKESGPIRPCHIRESYRRLKLQGKVPQRSVQRLFR 204

The following BLAST results are available for this feature:

BLAST of GT626082 vs. TrEMBL
BLAST of GT626082 vs. SwissProt
BLAST of GT626082 vs. TAIR peptide

BLAST of GT626082 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10


Match Name	E-value	Identity	Description
B7FIJ2_MEDTR	7.700e-70	80.11	Putative uncharacterized protein OS=Medicago trunc...	[more]
C6SV90_SOYBN	1.043e-58	91.27	Putative uncharacterized protein OS=Glycine max PE...	[more]
D7TQZ4_VITVI	2.659e-54	73.65	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9T387_RICCO	1.972e-49	78.57	Transcription initiation factor TFIID subunit, put...	[more]
B9GMZ1_POPTR	2.180e-48	71.94	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7MFL1_ARALY	5.370e-47	60.00	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
B6UGD0_MAIZE	9.159e-47	73.81	Transcription initiation factor TFIID subunit 11 O...	[more]
Q5QMA1_ORYSJ	2.040e-46	73.23	Os01g0680400 protein OS=Oryza sativa subsp. japoni...	[more]
C0P9B6_MAIZE	2.040e-46	73.02	Putative uncharacterized protein OS=Zea mays PE=2 ...	[more]
B8A7K9_ORYSI	2.040e-46	73.23	Putative uncharacterized protein OS=Oryza sativa s...	[more]

BLAST of GT626082 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 8


Match Name	E-value	Identity	Description
TAF11_MOUSE	9.611e-22	52.43	Transcription initiation factor TFIID subunit 11 O...	[more]
TAF11_RAT	1.639e-21	52.43	Transcription initiation factor TFIID subunit 11 O...	[more]
TAF11_PONAB	1.639e-21	52.43	Transcription initiation factor TFIID subunit 11 O...	[more]
TAF11_HUMAN	1.639e-21	52.43	Transcription initiation factor TFIID subunit 11 O...	[more]
TAF11_DROME	1.175e-19	52.58	Transcription initiation factor TFIID subunit 11 O...	[more]
TAF11_DICDI	5.831e-19	46.74	Transcription initiation factor TFIID subunit 11 O...	[more]
YE016_HUMAN	7.128e-17	50.50	Putative TAF11-like protein ENSP00000332601 OS=Hom...	[more]
TAF11_SCHPO	7.128e-17	39.83	Transcription initiation factor TFIID subunit 11 O...	[more]

BLAST of GT626082 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G20280.1	1.126e-47	66.67	\| Symbols: TAF11 \| TBP-associated factor 11 \| chr4...	[more]
AT1G20000.1	1.475e-39	54.60	\| Symbols: TAF11b \| TBP-associated factor 11B \| ch...	[more]

InterPro

Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006809	TAFII28-like protein	PANTHER	PTHR13218	FAMILY NOT NAMED	coord: 96..198 score: 2
IPR006809	TAFII28-like protein	PFAM	PF04719	TAFII28	coord: 93..182 score: 2.1
IPR009072	Histone-fold	GENE3D	1.10.20.10	no description	coord: 100..188 score: 5.5
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 100..189 score: 2.2
None	No IPR available	PANTHER	PTHR13218:SF5	SUBFAMILY NOT NAMED	coord: 96..198 score: 2
None	No IPR available	SEG	seg	seg	coord: 2..22 score: NAcoord: 64..72 score
None	No IPR available	SEG	seg	seg	coord: 6..26 score: NAcoord: 28..39 score: NAcoord: 42..53 score
None	No IPR available	SEG	seg	seg	coord: 8..33 score: NAcoord: 66..86 score
None	No IPR available	SEG	seg	seg	coord: 51..85 score: NAcoord: 93..122 score

Properties


Property Name	Value
Singlet in analysis	Lens culinaris unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>GT626082 ID=GT626082; Name=GT626082; organism=Lens culinaris; type=EST; length=771bp
CGGCCCATTCGAAGCAGCATTCGAAGAATCCCCACCAGAATCCCCAATCG
AAACCGAACCAGACCCATACGCAGACACAGAAAACCCTCCTTCCACTTCC
TTGATTTCCCAAACCACACACACCCACGAAGATGACAACCAATTCAAAAA
CACCAACTCCACCAACAACGCCACAATCGCCAAGAATAAAGACGAAGAAG
ATGATGAAGAAGAAGATAACATGGATGTTGAACTTGCTAAATTTCCTACC
GCTGGTGATCCTCACAAAATGGCTAAGATGCAGGCTATTTTGTCGCAATT
TACTGAAGAACAAATGAGTAGATATGAGTCTTTTCGTAGGGCTGGATTCC
AGAAAGCTAATATGAAACGGTTATTAGCAAGCATCACCGGGACCCAGAAA
ATCTCTATACCAATTACGATTGCAGTATCAGGAATTGCAAAAGTGTTTGT
GGGTGAAGTTGTGGAAACAGCTAGAATGGTTATGAAGGAGAGGAAAGAAT
CTGGACCTATCCGGCCATGTCATCTGAGAGAAGCACATAGACGACTAAAG
CTTGAAGGAAAAGTTTTCAAGAGAACAACCTCGAGGCTATTTCGGTAATG
GACCAATTATGATTCTTGGTATCATATGATTGGCTTGCAACAGTGGCATG
CAGGCAGGAAAAATATTTAATCCAGCTTATCCAATCAAGTGGAATGAGTG
AATCAATGTTGGTAGGTAAAATGGGCAAGTTTCCTACAAAATAAAATGGG
CAAGTTTCCTACAAAATATAA

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003702	obsolete RNA polymerase II transcription factor activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006367	transcription initiation at RNA polymerase II promoter

Vocabulary: **INTERPRO**
Term	Definition
IPR006809	TAFII28_dom
IPR009072	Histone-fold

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