GT627131

EST Overview
NameGT627131
Unique NameGT627131
TypeEST
OrganismLens culinaris (lentil)
Sequence length363
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT627131 vs. TrEMBL
Match: C6TKI8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.377e-26
Identity = 62/74 (83.78%), Postives = 63/74 (85.14%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPENV 222
            VQSIDQDSWVNFYGNIGKVLLSLVSV FDIIFIIQHYVLY  KK SKL  T   EDQIREHLVR SD+S PENV
Sbjct:  120 VQSIDQDSWVNFYGNIGKVLLSLVSVFFDIIFIIQHYVLYRGKKSSKLEITTEQEDQIREHLVRHSDQSSPENV 193          
BLAST of GT627131 vs. TrEMBL
Match: D7SPX4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_219.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003973001 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.489e-16
Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPENV 222
            VQSI+Q SWVNFYGNIGK+L+SLVSV FD++FI QHY+LYP KK  K    G   D+ RE L++  D    ENV
Sbjct:  204 VQSINQGSWVNFYGNIGKLLISLVSVFFDLVFISQHYLLYPGKKVGKCPKLG---DESREPLIKSVDHPQSENV 274          
BLAST of GT627131 vs. TrEMBL
Match: D7MJ50_ARALY (PQ-loop repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493915 PE=4 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.466e-15
Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171
            +QSIDQ+SW NFYGNIGK LLSL+S+ FDI+F+ QHYVLYP KK SK + TG + ++
Sbjct:  204 IQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMFQHYVLYPEKKASKSLETGEESNE 260          
BLAST of GT627131 vs. TrEMBL
Match: A9PDQ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1105031 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.174e-15
Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKK--PSKLVTTGNDEDQIREHLVRPSDE-SPPENV 222
            VQSIDQ+SWVNFYGNIGK LLSLVS+ FD++F+ QHY+LYP  K  P KL   G       E L+R S+E + PENV
Sbjct:  204 VQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHYILYPENKAVPPKLNKEGT------EPLIRFSEEPAAPENV 274          
BLAST of GT627131 vs. TrEMBL
Match: D7SPX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_219.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003971001 PE=4 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.598e-14
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKK 132
            VQSIDQDSWVNFYGNIGK+LLSLVSV FD+IFI QHY+LYP KK
Sbjct:  204 VQSIDQDSWVNFYGNIGKLLLSLVSVFFDLIFICQHYLLYPGKK 247          
BLAST of GT627131 vs. TrEMBL
Match: B9SLS0_RICCO (Cystinosin, putative OS=Ricinus communis GN=RCOM_0530900 PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.073e-14
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1
Query:    4 QSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIRE 180
            QSIDQ SWVNFYGNIGK LLSLVS+ FD++F+ QHY+LYPAKK  +  +   + D   E
Sbjct:  177 QSIDQHSWVNFYGNIGKTLLSLVSIFFDLLFMFQHYILYPAKKKKENASPETERDSAAE 235          
BLAST of GT627131 vs. TrEMBL
Match: Q8LDT5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.036e-13
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171
            +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK   T  + ++
Sbjct:  204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMCQHYVLYPEKKVSKSPETSEESNE 260          
BLAST of GT627131 vs. TrEMBL
Match: B4FX59_MAIZE (Cystinosin OS=Zea mays PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.308e-13
Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREH---LVRPSDESPPENV 222
            VQSIDQ + VNFYGNIGK LLSL +V FD++FIIQHYVLYP KK        N +  I E    L+RPSD+   +NV
Sbjct:  205 VQSIDQHTLVNFYGNIGKTLLSLETVFFDVLFIIQHYVLYPVKKDE------NGKAIISERVAPLIRPSDKPEEDNV 275          
BLAST of GT627131 vs. TrEMBL
Match: A9NRH3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.937e-13
Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPE 216
            +QSIDQDS  NFYGNIGK+LLSL +V FD++FI+QHYVLYP  K    V  G   + +  HL +P  ES  E
Sbjct:  204 MQSIDQDSLENFYGNIGKLLLSLETVIFDVLFIVQHYVLYPKTK----VEDGTAGENVERHLNKPLKESDHE 271          
BLAST of GT627131 vs. TrEMBL
Match: Q2QTY6_ORYSJ (Lysosomal Cystine Transporter family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g18110 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.333e-12
Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREH---LVRPSDESPPENV 222
            VQSIDQ + VNFYGNIGK LLSL  V FDI+FIIQHYVLYP K+        N +  I E    L+RPSD+   ++V
Sbjct:  204 VQSIDQHTLVNFYGNIGKTLLSLEVVFFDILFIIQHYVLYPVKRDE------NGKAIISERVAPLIRPSDKPEEDSV 274          
BLAST of GT627131 vs. SwissProt
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.804e-16
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171
            +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK   TG + ++
Sbjct:  204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNE 260          
BLAST of GT627131 vs. TAIR peptide
Match: AT5G40670.1 (| Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr5:16285968-16287591 FORWARD LENGTH=270)

HSP 1 Score: 82.4185 bits (202), Expect = 6.666e-17
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1
Query:    1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171
            +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK   TG + ++
Sbjct:  204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNE 260          
The following BLAST results are available for this feature:
BLAST of GT627131 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
C6TKI8_SOYBN2.377e-2683.78Putative uncharacterized protein OS=Glycine max PE... [more]
D7SPX4_VITVI6.489e-1659.46Whole genome shotgun sequence of line PN40024, sca... [more]
D7MJ50_ARALY2.466e-1564.91PQ-loop repeat family protein OS=Arabidopsis lyrat... [more]
A9PDQ5_POPTR7.174e-1559.74Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
D7SPX3_VITVI1.598e-1486.36Whole genome shotgun sequence of line PN40024, sca... [more]
B9SLS0_RICCO6.073e-1461.02Cystinosin, putative OS=Ricinus communis GN=RCOM_0... [more]
Q8LDT5_ARATH1.036e-1361.40Putative uncharacterized protein OS=Arabidopsis th... [more]
B4FX59_MAIZE2.308e-1357.14Cystinosin OS=Zea mays PE=2 SV=1[more]
A9NRH3_PICSI3.937e-1355.56Putative uncharacterized protein OS=Picea sitchens... [more]
Q2QTY6_ORYSJ3.333e-1255.84Lysosomal Cystine Transporter family protein, expr... [more]
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BLAST of GT627131 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
CTNS_ARATH7.804e-1663.16Cystinosin homolog OS=Arabidopsis thaliana GN=At5g... [more]
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BLAST of GT627131 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G40670.16.666e-1763.16| Symbols: | PQ-loop repeat family protein / tran... [more]
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InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR13131CYSTINOSINcoord: 1..41
score: 2.2

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT627131 ID=GT627131; Name=GT627131; organism=Lens culinaris; type=EST; length=363bp
GTGCAATCAATAGATCAAGATTCGTGGGTCAACTTCTATGGCAATATAGG
AAAAGTGTTGCTCTCTCTGGTATCTGTATCCTTTGACATTATTTTCATTA
TTCAACATTATGTCCTATATCCTGCTAAAAAACCCTCCAAATTGGTGACC
ACCGGCAATGATGAAGATCAAATTAGAGAGCACCTCGTCAGGCCTTCTGA
TGAGTCTCCACCAGAGAATGTATGAGACATGATTTGGTTCATAATGTAAA
TTCAAAGGAGCATGAAGATCGAGTCAGAAAGCATCTTGACAGGAATATTG
TAAAAGAGGCGATTTCTAATGTATATCAGGTTTCTCATTCATTCCTATCA
TGATCAAAACTAG
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