GT627131
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GT627131 vs. TrEMBL
Match: C6TKI8_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.377e-26 Identity = 62/74 (83.78%), Postives = 63/74 (85.14%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPENV 222 VQSIDQDSWVNFYGNIGKVLLSLVSV FDIIFIIQHYVLY KK SKL T EDQIREHLVR SD+S PENV Sbjct: 120 VQSIDQDSWVNFYGNIGKVLLSLVSVFFDIIFIIQHYVLYRGKKSSKLEITTEQEDQIREHLVRHSDQSSPENV 193
BLAST of GT627131 vs. TrEMBL
Match: D7SPX4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_219.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003973001 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.489e-16 Identity = 44/74 (59.46%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPENV 222 VQSI+Q SWVNFYGNIGK+L+SLVSV FD++FI QHY+LYP KK K G D+ RE L++ D ENV Sbjct: 204 VQSINQGSWVNFYGNIGKLLISLVSVFFDLVFISQHYLLYPGKKVGKCPKLG---DESREPLIKSVDHPQSENV 274
BLAST of GT627131 vs. TrEMBL
Match: D7MJ50_ARALY (PQ-loop repeat family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_493915 PE=4 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.466e-15 Identity = 37/57 (64.91%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171 +QSIDQ+SW NFYGNIGK LLSL+S+ FDI+F+ QHYVLYP KK SK + TG + ++ Sbjct: 204 IQSIDQNSWKNFYGNIGKTLLSLISIFFDILFMFQHYVLYPEKKASKSLETGEESNE 260
BLAST of GT627131 vs. TrEMBL
Match: A9PDQ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1105031 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.174e-15 Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKK--PSKLVTTGNDEDQIREHLVRPSDE-SPPENV 222 VQSIDQ+SWVNFYGNIGK LLSLVS+ FD++F+ QHY+LYP K P KL G E L+R S+E + PENV Sbjct: 204 VQSIDQNSWVNFYGNIGKTLLSLVSIFFDLVFMCQHYILYPENKAVPPKLNKEGT------EPLIRFSEEPAAPENV 274
BLAST of GT627131 vs. TrEMBL
Match: D7SPX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_219.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003971001 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.598e-14 Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKK 132 VQSIDQDSWVNFYGNIGK+LLSLVSV FD+IFI QHY+LYP KK Sbjct: 204 VQSIDQDSWVNFYGNIGKLLLSLVSVFFDLIFICQHYLLYPGKK 247
BLAST of GT627131 vs. TrEMBL
Match: B9SLS0_RICCO (Cystinosin, putative OS=Ricinus communis GN=RCOM_0530900 PE=4 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.073e-14 Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 4 QSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIRE 180 QSIDQ SWVNFYGNIGK LLSLVS+ FD++F+ QHY+LYPAKK + + + D E Sbjct: 177 QSIDQHSWVNFYGNIGKTLLSLVSIFFDLLFMFQHYILYPAKKKKENASPETERDSAAE 235
BLAST of GT627131 vs. TrEMBL
Match: Q8LDT5_ARATH (Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.036e-13 Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171 +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK T + ++ Sbjct: 204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMCQHYVLYPEKKVSKSPETSEESNE 260
BLAST of GT627131 vs. TrEMBL
Match: B4FX59_MAIZE (Cystinosin OS=Zea mays PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.308e-13 Identity = 44/77 (57.14%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREH---LVRPSDESPPENV 222 VQSIDQ + VNFYGNIGK LLSL +V FD++FIIQHYVLYP KK N + I E L+RPSD+ +NV Sbjct: 205 VQSIDQHTLVNFYGNIGKTLLSLETVFFDVLFIIQHYVLYPVKKDE------NGKAIISERVAPLIRPSDKPEEDNV 275
BLAST of GT627131 vs. TrEMBL
Match: A9NRH3_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.937e-13 Identity = 40/72 (55.56%), Postives = 49/72 (68.06%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREHLVRPSDESPPE 216 +QSIDQDS NFYGNIGK+LLSL +V FD++FI+QHYVLYP K V G + + HL +P ES E Sbjct: 204 MQSIDQDSLENFYGNIGKLLLSLETVIFDVLFIVQHYVLYPKTK----VEDGTAGENVERHLNKPLKESDHE 271
BLAST of GT627131 vs. TrEMBL
Match: Q2QTY6_ORYSJ (Lysosomal Cystine Transporter family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g18110 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 3.333e-12 Identity = 43/77 (55.84%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQIREH---LVRPSDESPPENV 222 VQSIDQ + VNFYGNIGK LLSL V FDI+FIIQHYVLYP K+ N + I E L+RPSD+ ++V Sbjct: 204 VQSIDQHTLVNFYGNIGKTLLSLEVVFFDILFIIQHYVLYPVKRDE------NGKAIISERVAPLIRPSDKPEEDSV 274
BLAST of GT627131 vs. SwissProt
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.804e-16 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171 +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK TG + ++ Sbjct: 204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNE 260
BLAST of GT627131 vs. TAIR peptide
Match: AT5G40670.1 (| Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr5:16285968-16287591 FORWARD LENGTH=270) HSP 1 Score: 82.4185 bits (202), Expect = 6.666e-17 Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 1 Query: 1 VQSIDQDSWVNFYGNIGKVLLSLVSVSFDIIFIIQHYVLYPAKKPSKLVTTGNDEDQ 171 +QSIDQ+SW NFYGN+GK LLSL+S+ FDI+F+ QHYVLYP KK SK TG + ++ Sbjct: 204 IQSIDQNSWKNFYGNMGKTLLSLISIFFDILFMFQHYVLYPEKKVSKSPETGEESNE 260 The following BLAST results are available for this feature:
BLAST of GT627131 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl) Total hits: 10
BLAST of GT627131 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot) Total hits: 1
BLAST of GT627131 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GT627131 ID=GT627131; Name=GT627131; organism=Lens culinaris; type=EST; length=363bpback to top |