GT620410

EST Overview
NameGT620410
Unique NameGT620410
TypeEST
OrganismLens culinaris (lentil)
Sequence length745
Libraries
Library NameType
LIBEST_025390 LCUSE1NGcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Lens culinaris unigene v1Lens culinaris unigene v1EST
Homology
BLAST of GT620410 vs. TrEMBL
Match: B7FGR2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.573e-85
Identity = 158/201 (78.61%), Postives = 171/201 (85.07%), Query Frame = 3
Query:  141 MSTQRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            M+TQRSHVPKFGNWE E+DVPYTVYFDKARK+RPG+KMINPNDPEEN DL LQNSSS DVIPPKPRV SEN SEKG++R THN+LQKNK+EGD+K SVNSPAR                GVGSAD+RRRPSRQSTA SE SVERSPLHRQAKTPGRDSPSWEGKS+Y+S HGTPGRSRLR VNR+DE  DKSAAVPKFGEW
Sbjct:    1 MTTQRSHVPKFGNWEGEDDVPYTVYFDKARKSRPGSKMINPNDPEENPDLVLQNSSSDDVIPPKPRVSSENQSEKGTVRLTHNDLQKNKEEGDVKHSVNSPARPGGH------------GVGSADSRRRPSRQSTASSEYSVERSPLHRQAKTPGRDSPSWEGKSTYDSSHGTPGRSRLRPVNRDDEIPDKSAAVPKFGEW 189          
BLAST of GT620410 vs. TrEMBL
Match: B7FHG3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.557e-72
Identity = 146/203 (71.92%), Postives = 166/203 (81.77%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPP---KPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTP-GRDSPSWEGK-SSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QR+HVPKFGNWE+ ++VPYT YFD+ARK R GTKMINPNDPEEN DL L NSSS D  PP   KPR +SE++S KG +R T  E  K+ D GD KQ V+SPARH+N++NRS+ DS  RPGVGSADNRRRPSRQSTAGSE+SVERSPLHRQA+ P GRDSPSWEGK +SY+S HGTPGRSRLR  NR DET DK AAVPKFG+W
Sbjct:    3 QRTHVPKFGNWESNDNVPYTAYFDEARKGRTGTKMINPNDPEENVDLVLDNSSS-DHPPPSNTKPRANSEDLSGKGLVRSTI-ESHKSLD-GDPKQYVDSPARHDNASNRSSNDSTPRPGVGSADNRRRPSRQSTAGSEHSVERSPLHRQARAPAGRDSPSWEGKNNSYDSSHGTPGRSRLRPANRGDETPDKGAAVPKFGDW 202          
BLAST of GT620410 vs. TrEMBL
Match: C6TNP3_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.615e-61
Identity = 129/199 (64.82%), Postives = 155/199 (77.89%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRP-GVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            Q S+VPKFGN E+E++V  T + DKA+K + G+KMINPND +ENSD+     SSAD+   KPRVHSE+ S KGS+R TH ELQK++++GD KQ  +SPARH        GDS HR  GVGSADNR+RPSRQST G E++++RSPLHRQAKTPGRDSPSWEGK+SY+S HGTPGRSRLR   R DET D+ AAVPKFGEW
Sbjct:    3 QHSNVPKFGNQESEDNVLDTAHSDKAQKGQSGSKMINPNDTKENSDI----VSSADLPHSKPRVHSEDPSGKGSVRTTH-ELQKSREDGDPKQFTDSPARHGG------GDSSHRGHGVGSADNRKRPSRQST-GPEHNIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRPSYRGDETPDEGAAVPKFGEW 189          
BLAST of GT620410 vs. TrEMBL
Match: C6TH04_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.615e-61
Identity = 125/198 (63.13%), Postives = 145/198 (73.23%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNW++  +VPYT YFDKARK R GT++INPNDPEEN+DL   N SS ++ P +PR +SE+ S KGSL            E D K  + SPARH+N ++RS G   H  GVGSADNRRR S QST GSE S+ERSPLHRQA+ PGRDSP WE K+SY+S  GTPGRSRLR  NR DET DK AAVPKFG+W
Sbjct:    3 QRSHVPKFGNWDSGENVPYTAYFDKARKGRTGTRIINPNDPEENADLSFDNPSSDNLPPTRPRTNSEDQSGKGSLHL----------EDDPKNFIESPARHDNVSSRS-GSRSH--GVGSADNRRRHSTQST-GSEYSIERSPLHRQARAPGRDSPQWEPKNSYDSSQGTPGRSRLRPANRGDETPDKGAAVPKFGDW 186          
BLAST of GT620410 vs. TrEMBL
Match: C6TB99_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 3.046e-60
Identity = 124/198 (62.63%), Postives = 146/198 (73.74%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNW++  +VPYT YFDKARK R G ++INPNDPEEN+DL L N SS  + P +PR +SE+ S KGSL            E D K  V+SPARH+N ++RS G   H  GVGSA+NRRR S QST GSE S+ERSPLHRQA+ PGRDSP WE K+S+++  GTPGRSRLR VNR DET DK AAVPKFG+W
Sbjct:    3 QRSHVPKFGNWDSGENVPYTAYFDKARKGRTGARIINPNDPEENADLSLDNPSSDHLPPTRPRANSEDQSGKGSLPL----------EDDPKHFVDSPARHDNVSSRS-GSRSH--GVGSAENRRRHSTQST-GSEYSIERSPLHRQARAPGRDSPQWEPKNSHDNSQGTPGRSRLRPVNRGDETPDKGAAVPKFGDW 186          
BLAST of GT620410 vs. TrEMBL
Match: O65752_CICAR (Putative uncharacterized protein OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.145e-59
Identity = 118/158 (74.68%), Postives = 131/158 (82.91%), Query Frame = 3
Query:  252 MINPNDPEENSDLDLQNSSS-ADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRP---GVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDK 713
            MINPNDPEENSDL LQNSSS AD+I PKP+V+SEN SEKGS+R THNELQK+K++GDLK  VNSPARH+N +NRS GDS  RP   GVGSAD  RRP +QST GSE S+ERSPLHRQAKTPGRDSPSWE KSSY+S HGTPGRSRLR  NR  + L K
Sbjct:    1 MINPNDPEENSDLVLQNSSSDADIIHPKPKVYSENQSEKGSVRSTHNELQKSKEDGDLKNFVNSPARHDNLSNRSAGDSASRPGSHGVGSADTYRRPLKQST-GSEYSIERSPLHRQAKTPGRDSPSWERKSSYDSSHGTPGRSRLRPANRGMKLLIK 157          

HSP 2 Score: 29.6462 bits (65), Expect = 1.145e-59
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 1
Query:  697 MKLLIKVLLFQSLVSG 744
            MKLLIKVLLF++LVSG
Sbjct:  152 MKLLIKVLLFRNLVSG 167          
BLAST of GT620410 vs. TrEMBL
Match: D2D0J2_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-2 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.988e-52
Identity = 117/204 (57.35%), Postives = 141/204 (69.12%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGT--KMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRP----GVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNWE E  VPYT YFDKARK R G   KMINPNDP+EN D+    S+S+   PPK R   E        +P H E ++++++ DL+ + NSPA+  NS     G+S H+P    GV S + RRRP+R S AGSENSVERSPLHR A+  GRDSPSWEGK+SYE+ HGTPGRSRL+     DE+ +K AAVPKFGEW
Sbjct:    3 QRSHVPKFGNWEGEESVPYTAYFDKARKDRTGVGGKMINPNDPQENPDILSDISASS---PPKVRPEPE--------KPVH-EQRRSREDNDLRFA-NSPAQRRNS-----GESAHQPSRGRGVSSGETRRRPARPS-AGSENSVERSPLHRNARVTGRDSPSWEGKASYETSHGTPGRSRLKP---RDESPEKGAAVPKFGEW 184          
BLAST of GT620410 vs. TrEMBL
Match: B9GQK9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_709976 PE=4 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 5.389e-49
Identity = 109/209 (52.15%), Postives = 143/209 (68.42%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPP-KPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHR------PGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRD----SPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNWE+E +VPYT YFDKARK R G KMINPNDP+EN DL + + ++ D  PP + +   E  + +G++R  H E + +++E DLKQ  NSPAR+EN N R++ +   +      P  G A   +RP+R S  GSENS+E+SP+H  A+  GR+    SPSWEGK+S +  HGTPGRSRLR   + DE+ DK AAVPKFG+W
Sbjct:    3 QRSHVPKFGNWESEENVPYTAYFDKARKGRTGGKMINPNDPQENPDL-VSDYAAPDQAPPFRAKAPPEEAAGQGAVRQAH-EHRTSREESDLKQFANSPARNENLNRRASYEPAPQRYGGRGPSFGEA--HKRPARYS-IGSENSMEQSPIHNHARISGRNSGAPSPSWEGKNSNDGSHGTPGRSRLRP--KGDESPDKGAAVPKFGDW 204          
BLAST of GT620410 vs. TrEMBL
Match: A5BB95_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002333 PE=4 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.048e-48
Identity = 110/207 (53.14%), Postives = 143/207 (69.08%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHR----PGVGSADNRRRPSRQSTAGSENSVERSPL--HRQAKTPGR--DSPSWEGK-SSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNWE+E +VPYT YFDKARK R GTK+INPNDP+EN D+   N+S A   PP+ R   E   E    + TH E + +K++GD KQ  +SPAR++N   R + +S H+     G+ S +  R+P  +++ GSE+S++RSPL  H QA+  GR   SPSWEGK SSY+S HGTPGRSR++   R DE+ DK AAVPKFG+W
Sbjct:   10 QRSHVPKFGNWESEENVPYTAYFDKARKGRTGTKIINPNDPQENPDMFSDNASEAR-SPPRTRAEQE---ESIGQQVTH-EHRLSKEDGDQKQVTDSPARNDNLGRRPSTESTHQRQGGRGMNSGETYRKP--RTSGGSEHSIDRSPLHPHHQARIAGRGTGSPSWEGKGSSYDSSHGTPGRSRMKP-TRGDESPDKGAAVPKFGDW 208          
BLAST of GT620410 vs. TrEMBL
Match: D2D0J1_MALDO (RIN4-like protein OS=Malus domestica GN=RIN4-1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.782e-48
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTRPGT--KMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRP----GVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPKFGEW 743
            QRSHVPKFGNWE +  VPYT YFDKARK R G   KMINPNDPEEN D+    S+S+   PPK R       E G  +P H E ++++++ DL+ + NSPA+      RS+G+  H+P    GV S +  RR +R S AGSENSVERSPLHR A+  GRDSPSWEGK+SYES HGTP RSRL+     DE+ +K AAVPKFGEW
Sbjct:    3 QRSHVPKFGNWEDQESVPYTAYFDKARKGRTGVGGKMINPNDPEENPDILSDTSASS---PPKVR------PEPG--KPVH-ERRRSREDNDLRFA-NSPAQR-----RSSGE--HQPNRGRGVSSGETHRRAARPS-AGSENSVERSPLHRNARVSGRDSPSWEGKASYESSHGTPARSRLKP---RDESPEKGAAVPKFGEW 182          
BLAST of GT620410 vs. SwissProt
Match: RIN4_ARATH (RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.736e-25
Identity = 81/200 (40.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  153 RSHVPKFGNWEAENDVPYTVYFDKARKTR-PGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVE-RSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVN-REDETLDKSAAVPKFGEW 743
            RS+VPKFGNWEAE +VPYT YFDKARKTR PG+K++NPNDPE NSD    + S A   PP  R   E +      R    E  ++++E +LKQ                GD+      G + N     RQ  A   NS + +SPLH               K+SY+   GT G+SR +  N R DE+ +K   VPKFG+W
Sbjct:    3 RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD----SQSQAPPHPPSSRTKPEQVDTVRRSR----EHMRSREESELKQ---------------FGDA------GGSSNEAANKRQGRASQNNSYDNKSPLH---------------KNSYD---GT-GKSRPKPTNLRADESPEKVTVVPKFGDW 154          
BLAST of GT620410 vs. SwissProt
Match: NOIL_ELAOL (NOI-like protein OS=Elaeis oleifera PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.233e-10
Identity = 52/195 (26.67%), Postives = 86/195 (44.10%), Query Frame = 3
Query:  150 QRSHVPKFGNWEAENDVPYTVYFDKARKTR-PGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVERSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVNREDETLDKSAAVPK 731
            Q +HVPKFGNW+ EN + YT YF+   + +  G+K+ NPNDPEEN       + + D        H  + S    +   H      +++ +  + V +P  H +       DS HR     + N    +  S++   NS    P H+  +   +D    EGKS   +       ++ R ++RE  +  +S+   K
Sbjct:    3 QPAHVPKFGNWDGEN-ISYTTYFETVHRDKGDGSKIFNPNDPEENPQAFYPRTVAQD--HQHSEKHHNDTSTDYHVVKQHRRKHHRREDREFHRYVEAPRPHRSPFQGVDMDS-HR-----SRNHGTSATMSSSVKRNSDNWLPQHQHHRRTNKDLA--EGKSWLFTTTTASSYTKSRKLSRECSSTTQSSISAK 186          
BLAST of GT620410 vs. TAIR peptide
Match: AT3G25070.1 (| Symbols: RIN4 | RPM1 interacting protein 4 | chr3:9132458-9133747 FORWARD LENGTH=211)

HSP 1 Score: 114.39 bits (285), Expect = 6.700e-26
Identity = 81/200 (40.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  153 RSHVPKFGNWEAENDVPYTVYFDKARKTR-PGTKMINPNDPEENSDLDLQNSSSADVIPPKPRVHSENISEKGSLRPTHNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRRPSRQSTAGSENSVE-RSPLHRQAKTPGRDSPSWEGKSSYESGHGTPGRSRLRSVN-REDETLDKSAAVPKFGEW 743
            RS+VPKFGNWEAE +VPYT YFDKARKTR PG+K++NPNDPE NSD    + S A   PP  R   E +      R    E  ++++E +LKQ                GD+      G + N     RQ  A   NS + +SPLH               K+SY+   GT G+SR +  N R DE+ +K   VPKFG+W
Sbjct:    3 RSNVPKFGNWEAEENVPYTAYFDKARKTRAPGSKIMNPNDPEYNSD----SQSQAPPHPPSSRTKPEQVDTVRRSR----EHMRSREESELKQ---------------FGDA------GGSSNEAANKRQGRASQNNSYDNKSPLH---------------KNSYD---GT-GKSRPKPTNLRADESPEKVTVVPKFGDW 154          
BLAST of GT620410 vs. TAIR peptide
Match: AT5G48657.2 (| Symbols: | defense protein-related | chr5:19734120-19735516 REVERSE LENGTH=219)

HSP 1 Score: 55.0694 bits (131), Expect = 4.824e-8
Identity = 44/133 (33.08%), Postives = 65/133 (48.87%), Query Frame = 3
Query:  153 RSHVPKFGNWEAENDVPYTVYFDKARKTRPGTKMINPND-PEENSD-LDLQNSSSADVIPP----KPRVHSENISEKGSLRPT--HNELQKNKDEGDLKQSVNSPARHENSNNRSTGDSVHRPGVGSADNRRR 527
            R HVPKFG+W    D P+TV F+KA K++    + NPN+ P+ N +    +N S  D  PP    +PR    N  ++   RP+  HNE        +  +SV  P   E  N+++ G      G  +  NRR+
Sbjct:    4 RPHVPKFGDWT--EDAPFTVVFEKASKSKKNMNVANPNEYPDMNPNAAQNRNMSRPDQQPPNHNVRPRHERFNSRDETEFRPSPAHNE------RNNRVRSV--PPTPETYNHQTYGGGGRSMGNPTEINRRQ 126          
The following BLAST results are available for this feature:
BLAST of GT620410 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
B7FGR2_MEDTR3.573e-8578.61Putative uncharacterized protein OS=Medicago trunc... [more]
B7FHG3_MEDTR1.557e-7271.92Putative uncharacterized protein OS=Medicago trunc... [more]
C6TNP3_SOYBN1.615e-6164.82Putative uncharacterized protein OS=Glycine max PE... [more]
C6TH04_SOYBN1.615e-6163.13Putative uncharacterized protein OS=Glycine max PE... [more]
C6TB99_SOYBN3.046e-6062.63Putative uncharacterized protein OS=Glycine max PE... [more]
O65752_CICAR1.145e-5974.68Putative uncharacterized protein OS=Cicer arietinu... [more]
D2D0J2_MALDO3.988e-5257.35RIN4-like protein OS=Malus domestica GN=RIN4-2 PE=... [more]
B9GQK9_POPTR5.389e-4952.15Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BB95_VITVI2.048e-4853.14Putative uncharacterized protein OS=Vitis vinifera... [more]
D2D0J1_MALDO7.782e-4856.37RIN4-like protein OS=Malus domestica GN=RIN4-1 PE=... [more]
back to top
BLAST of GT620410 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Lens culinaris unigene v1 vs Swissprot)
Total hits: 2
Match NameE-valueIdentityDescription
RIN4_ARATH6.736e-2540.50RPM1-interacting protein 4 OS=Arabidopsis thaliana... [more]
NOIL_ELAOL1.233e-1026.67NOI-like protein OS=Elaeis oleifera PE=2 SV=1[more]
back to top
BLAST of GT620410 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Lens culinaris unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT3G25070.16.700e-2640.50| Symbols: RIN4 | RPM1 interacting protein 4 | chr... [more]
AT5G48657.24.824e-833.08| Symbols: | defense protein-related | chr5:19734... [more]
back to top
InterPro
Analysis Name: InterProScan analysis for Lens culinaris unigene v1
Date Performed: 2011-01-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RPM1-interacting protein 4, defence responsePFAMPF05627AvrRpt-cleavagecoord: 5..35
score: 5.9
NoneNo IPR availableSEGsegsegcoord: 24..34
score

Properties
Property NameValue
Singlet in analysisLens culinaris unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>GT620410 ID=GT620410; Name=GT620410; organism=Lens culinaris; type=EST; length=745bp
CTGTACGGAATAGTTTGCTGGTTTCTCTGAGTTGTCATCTTTATTGTCTC
TGATCCAACCAAAAATCTCAACTTTCTTCAACAATCCACCTCTACAATTT
TTGGGCTGTGCCTATTTTCTCAAGATTAGTTTGCTAGCAGATGTCAACAC
AACGTTCTCATGTTCCAAAGTTTGGCAATTGGGAAGCTGAAAATGATGTT
CCTTATACAGTGTATTTTGACAAAGCTCGGAAAACTCGACCTGGCACCAA
AATGATCAATCCGAATGACCCTGAGGAAAATTCAGATTTAGATCTTCAAA
ATTCATCTTCTGCTGATGTAATTCCTCCAAAACCAAGAGTTCACTCAGAG
AATATATCTGAAAAAGGATCACTGAGACCAACACATAATGAGTTACAAAA
GAACAAGGACGAGGGTGATCTTAAGCAATCTGTTAACTCGCCGGCTCGCC
ATGAAAATTCAAACAACAGGAGTACCGGCGATTCCGTCCATCGTCCTGGA
GTTGGTTCTGCTGATAACCGCAGAAGACCTTCAAGACAAAGTACTGCTGG
CTCGGAGAATAGTGTCGAACGTTCACCTCTTCATCGCCAGGCTAAAACCC
CTGGCAGGGATAGTCCTTCTTGGGAAGGAAAGAGCTCATATGAGAGCGGT
CACGGTACACCAGGAAGATCTCGATTGAGATCAGTCAATCGAGAGGATGA
AACTCTTGATAAAAGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGA
back to top
Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
IPR008700TypeIII_avirulence_cleave