EX571064

EST Overview
NameEX571064
Unique NameEX571064
TypeEST
OrganismPisum sativum (pea)
Sequence length319
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
Homology
BLAST of EX571064 vs. TrEMBL
Match: B9N780_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583461 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.697e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAIASLNR SGGDCS KFKNLM+E+SK+Q LWDKYYSIRNE
Sbjct: 1175 RAIASLNRTSGGDCSLKFKNLMSEISKSQTLWDKYYSIRNE 1215          
BLAST of EX571064 vs. TrEMBL
Match: B9N0I8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827477 PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 8.746e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAIASLNRISGGDCS KFKNLM+E+SK+  LWDKYYSIRNE
Sbjct: 1183 RAIASLNRISGGDCSLKFKNLMSEISKSPTLWDKYYSIRNE 1223          
BLAST of EX571064 vs. TrEMBL
Match: B9SPA7_RICCO (Tip120, putative OS=Ricinus communis GN=RCOM_0495920 PE=4 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.948e-12
Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAIA+LNRISGGDCS KFKNLMNE+SK+  LW+KYYSIRNE
Sbjct: 1178 RAIAALNRISGGDCSHKFKNLMNEISKSPTLWEKYYSIRNE 1218          
BLAST of EX571064 vs. TrEMBL
Match: D7TGL2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023143001 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.404e-12
Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAIASLNRISGGDCS KFK+LMNE+SK+  LW+KY+SIRNE
Sbjct: 1205 RAIASLNRISGGDCSLKFKHLMNEISKSSTLWEKYHSIRNE 1245          
BLAST of EX571064 vs. TAIR peptide
Match: AT2G02560.2 (| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1217)

HSP 1 Score: 48.9062 bits (115), Expect = 7.475e-7
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAI+SL+RI+G D S KFK LM ++ ++  LW+K+ +IRNE
Sbjct: 1177 RAISSLDRINGVDYSHKFKGLMGDMKRSVPLWEKFQTIRNE 1217          
BLAST of EX571064 vs. TAIR peptide
Match: AT2G02560.1 (| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1219)

HSP 1 Score: 48.9062 bits (115), Expect = 7.475e-7
Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 3
Query:    3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125
            RAI+SL+RI+G D S KFK LM ++ ++  LW+K+ +IRNE
Sbjct: 1179 RAISSLDRINGVDYSHKFKGLMGDMKRSVPLWEKFQTIRNE 1219          
The following BLAST results are available for this feature:
BLAST of EX571064 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 4
Match NameE-valueIdentityDescription
B9N780_POPTR6.697e-1385.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9N0I8_POPTR8.746e-1385.37Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9SPA7_RICCO1.948e-1282.93Tip120, putative OS=Ricinus communis GN=RCOM_04959... [more]
D7TGL2_VITVI7.404e-1280.49Whole genome shotgun sequence of line PN40024, sca... [more]
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BLAST of EX571064 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 2
Match NameE-valueIdentityDescription
AT2G02560.27.475e-753.66| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cul... [more]
AT2G02560.17.475e-753.66| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cul... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX571064 ID=EX571064; Name=EX571064; organism=Pisum sativum; type=EST; length=319bp
TCCGAGCTATTGCTTCCTTGAACCGCATAAGCGGAGGAGATTGCAGTGCC
AAGTTCAAGAACCTTATGAATGAAGTATCAAAAACACAAGCTCTCTGGGA
TAAATACTATTCAATCCGCAATGAATAATTCAAATCCAGTTTTATACTGA
GCAGCAATATGACATCTGCCGGGGGAATGCAGCAAGTGGCATGGTGATAT
TGAGACCGATGATACAAGTGATTTGGAAAACTAGTTAATTGTACCATACA
AGATTTCGATTCAAGTGCAATGGTAATAATACCAGTAGTGATTTCTTGTA
TAGGATGAAAGATTTTGCC
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