EX571064
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EX571064 vs. TrEMBL
Match: B9N780_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_583461 PE=4 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 6.697e-13 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAIASLNR SGGDCS KFKNLM+E+SK+Q LWDKYYSIRNE Sbjct: 1175 RAIASLNRTSGGDCSLKFKNLMSEISKSQTLWDKYYSIRNE 1215
BLAST of EX571064 vs. TrEMBL
Match: B9N0I8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827477 PE=4 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 8.746e-13 Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAIASLNRISGGDCS KFKNLM+E+SK+ LWDKYYSIRNE Sbjct: 1183 RAIASLNRISGGDCSLKFKNLMSEISKSPTLWDKYYSIRNE 1223
BLAST of EX571064 vs. TrEMBL
Match: B9SPA7_RICCO (Tip120, putative OS=Ricinus communis GN=RCOM_0495920 PE=4 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.948e-12 Identity = 34/41 (82.93%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAIA+LNRISGGDCS KFKNLMNE+SK+ LW+KYYSIRNE Sbjct: 1178 RAIAALNRISGGDCSHKFKNLMNEISKSPTLWEKYYSIRNE 1218
BLAST of EX571064 vs. TrEMBL
Match: D7TGL2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_35.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023143001 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.404e-12 Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAIASLNRISGGDCS KFK+LMNE+SK+ LW+KY+SIRNE Sbjct: 1205 RAIASLNRISGGDCSLKFKHLMNEISKSSTLWEKYHSIRNE 1245
BLAST of EX571064 vs. TAIR peptide
Match: AT2G02560.2 (| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1217) HSP 1 Score: 48.9062 bits (115), Expect = 7.475e-7 Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAI+SL+RI+G D S KFK LM ++ ++ LW+K+ +IRNE Sbjct: 1177 RAISSLDRINGVDYSHKFKGLMGDMKRSVPLWEKFQTIRNE 1217
BLAST of EX571064 vs. TAIR peptide
Match: AT2G02560.1 (| Symbols: CAND1, ATCAND1, ETA2, TIP120, HVE | cullin-associated and neddylation dissociated | chr2:690345-697342 FORWARD LENGTH=1219) HSP 1 Score: 48.9062 bits (115), Expect = 7.475e-7 Identity = 22/41 (53.66%), Postives = 32/41 (78.05%), Query Frame = 3 Query: 3 RAIASLNRISGGDCSAKFKNLMNEVSKTQALWDKYYSIRNE 125 RAI+SL+RI+G D S KFK LM ++ ++ LW+K+ +IRNE Sbjct: 1179 RAISSLDRINGVDYSHKFKGLMGDMKRSVPLWEKFQTIRNE 1219 The following BLAST results are available for this feature:
BLAST of EX571064 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of EX571064 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EX571064 ID=EX571064; Name=EX571064; organism=Pisum sativum; type=EST; length=319bpback to top |