GH720250
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GH720250 vs. TrEMBL
Match: C6T952_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.091e-18 Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSASFKDSHSQQEIFK 212 GGMMGSLRVIELQLVAF+LV SASGLVPLLDLVFPA ASAYILAL++FAFP++S+S + +F+ Sbjct: 34 GGMMGSLRVIELQLVAFILVFSASGLVPLLDLVFPAFASAYILALSQFAFPSASSSGTEIFKGSRLFR 101
BLAST of GH720250 vs. TrEMBL
Match: A5BC59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014982 PE=4 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.414e-18 Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSASFKDSHSQQEIFK 212 GG+MGSLRVIELQLVAF++V SASGLVPLLDL+FPA ASAY+LAL+RFAFP +S S QEIF+ Sbjct: 42 GGVMGSLRVIELQLVAFIMVFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGSS--TSTGSQEIFQ 107
BLAST of GH720250 vs. TrEMBL
Match: D7TB12_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_10.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010531001 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.509e-17 Identity = 47/68 (69.12%), Postives = 57/68 (83.82%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSASFKDSHSQQEIFK 212 GG+MGSLRVIELQLVAF++V SASGLVPLLDL+FPA ASAY+LAL+RFAFP ++ S +EIF+ Sbjct: 42 GGVMGSLRVIELQLVAFIMVFSASGLVPLLDLIFPAFASAYLLALSRFAFPAHGST--TSTGSREIFQ 107
BLAST of GH720250 vs. TrEMBL
Match: B9RMB3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1079240 PE=4 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.742e-16 Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSASFKDSHSQQEIFK 212 GG+MGSLRVIELQLVAF++V SASGLVPL DLVFPA ASAY+L LARF FP+ + S QEIF+ Sbjct: 38 GGVMGSLRVIELQLVAFIMVFSASGLVPLFDLVFPAFASAYLLVLARFVFPSHGGT---RTSPQEIFQ 102
BLAST of GH720250 vs. TrEMBL
Match: B9GZM1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_647024 PE=4 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.275e-16 Identity = 47/64 (73.44%), Postives = 53/64 (82.81%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFP----TSSASFKDS 188 GG+MGSLRVIELQLVAF++V S SGLVPLLDLVFPA SAY+LAL+RFAFP TSS F+ S Sbjct: 41 GGLMGSLRVIELQLVAFIMVFSISGLVPLLDLVFPAFTSAYLLALSRFAFPSYGRTSSGIFQGS 104
BLAST of GH720250 vs. TrEMBL
Match: B9GMN5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548050 PE=4 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.971e-16 Identity = 47/65 (72.31%), Postives = 53/65 (81.54%), Query Frame = 3 Query: 6 AGGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFP----TSSASFKDS 188 AGG+MGSLR IELQLVAF++V S SGLVPLLDLVFPA SAY+LAL+RFAFP TSS F+ S Sbjct: 40 AGGVMGSLRAIELQLVAFIMVFSVSGLVPLLDLVFPAFTSAYLLALSRFAFPSYGRTSSEIFQGS 104
BLAST of GH720250 vs. TrEMBL
Match: D7KBW0_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_473001 PE=4 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 6.618e-16 Identity = 45/69 (65.22%), Postives = 55/69 (79.71%), Query Frame = 3 Query: 6 AGGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSASFKDSHSQQEIFK 212 +GG+MGSLRVIELQLVAF+LV SASGLVP+LD++FPA AS YI+AL+R AFP+ S S EIF+ Sbjct: 36 SGGLMGSLRVIELQLVAFILVFSASGLVPILDMLFPAFASVYIIALSRLAFPSHGV----STSSPEIFR 100
BLAST of GH720250 vs. TrEMBL
Match: Q9C7F4_ARATH (AT1G27990 protein OS=Arabidopsis thaliana GN=AT1G27990 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.926e-15 Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 6 AGGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSAS 176 +GG+MGSLRVIELQLVAF+LV SASGLVP+LD++FPA AS YI+AL+R AFP+ S Sbjct: 36 SGGLMGSLRVIELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVS 92
BLAST of GH720250 vs. TrEMBL
Match: Q8GZ91_ARATH (Putative uncharacterized protein At1g27990/F13K9_9 OS=Arabidopsis thaliana GN=At1g27990/F13K9_9 PE=4 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.926e-15 Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 6 AGGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSAS 176 +GG+MGSLRVIELQLVAF+LV SASGLVP+LD++FPA AS YI+AL+R AFP+ S Sbjct: 36 SGGLMGSLRVIELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVS 92
BLAST of GH720250 vs. TrEMBL
Match: C5YER5_SORBI (Putative uncharacterized protein Sb06g013760 OS=Sorghum bicolor GN=Sb06g013760 PE=4 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.630e-14 Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 9 GGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFP------TSSASFKDSHSQQEIFK 212 GG+MGSLRVIELQLVAF++V SASGLVPL+DLVFP + Y+LA++R AFP ++A+ + + QEIF+ Sbjct: 27 GGVMGSLRVIELQLVAFIMVFSASGLVPLIDLVFPVATTIYLLAISRLAFPPLHSKLDAAAAARSPAASQEIFR 100
BLAST of GH720250 vs. TAIR peptide
Match: AT1G27990.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:9752799-9753919 REVERSE LENGTH=271) HSP 1 Score: 85.5001 bits (210), Expect = 7.390e-18 Identity = 41/57 (71.93%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 6 AGGMMGSLRVIELQLVAFVLVLSASGLVPLLDLVFPALASAYILALARFAFPTSSAS 176 +GG+MGSLRVIELQLVAF+LV SASGLVP+LD++FPA AS YI+AL+R AFP+ S Sbjct: 36 SGGLMGSLRVIELQLVAFILVFSASGLVPILDMLFPAFASIYIIALSRLAFPSHGVS 92 The following BLAST results are available for this feature:
BLAST of GH720250 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of GH720250 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >GH720250 ID=GH720250; Name=GH720250; organism=Pisum sativum; type=EST; length=213bpback to top |