AM161836
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161836 vs. TrEMBL
Match: D7TPX3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_63.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00031911001 PE=4 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 4.125e-39 Identity = 81/89 (91.01%), Postives = 85/89 (95.51%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGD +SPNVKGISMLARDLQSIVLYD EGKFAGVRRPNSNLPI+IDG+ IVI DAIGSSGLDLKTDPGVP+VYAGFGALMLTTCI Sbjct: 411 TFLPVGDSDSPNVKGISMLARDLQSIVLYDKEGKFAGVRRPNSNLPIDIDGTRIVIEDAIGSSGLDLKTDPGVPIVYAGFGALMLTTCI 499
BLAST of AM161836 vs. TrEMBL
Match: B9RZC9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0938170 PE=4 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.567e-38 Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGDVNSPNVKGISMLARDLQSIVLYD EGKF GVRRPNS LPI+IDG+ IVI DAIGS+GL+LKTDPGVPVVYAGFGALMLTTCI Sbjct: 409 TFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGTRIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCI 497
BLAST of AM161836 vs. TrEMBL
Match: B9HRS1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_722116 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.047e-38 Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGDVNSPNVKGISMLARDLQSIVLYD EGKF GVRRPNS LPI+IDG +I+I DAIGSSGL+LKTDPGVPVVYAGFGALMLTTC+ Sbjct: 286 TFLPVGDVNSPNVKGISMLARDLQSIVLYDQEGKFVGVRRPNSKLPIDIDGMKIIIEDAIGSSGLELKTDPGVPVVYAGFGALMLTTCL 374
BLAST of AM161836 vs. TrEMBL
Match: D7KE35_ARALY (Cytochrome c biogenesis protein family OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_474076 PE=4 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 6.585e-37 Identity = 76/89 (85.39%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGD N+PNVKGISMLARDLQSIV+YD EGKFAG+RRPNS LPI I+G +IVI DAIGS+GL+LKTDPGVPVVYAGFGALMLTTCI Sbjct: 406 TFLPVGDTNAPNVKGISMLARDLQSIVVYDLEGKFAGIRRPNSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCI 494
BLAST of AM161836 vs. TrEMBL
Match: C5WZ85_SORBI (Putative uncharacterized protein Sb01g006880 OS=Sorghum bicolor GN=Sb01g006880 PE=4 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.793e-34 Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 1 Query: 1 TFLPVGDVNS--PNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLP+ DV+S PNVKGISMLARDLQSIVLYD EGKF GVRRP+S LPI I+G+EI+I DAIGS+GLDLKTDPGVP+VYAGFGALMLTTCI Sbjct: 412 TFLPLEDVDSSNPNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEINGNEILIEDAIGSTGLDLKTDPGVPIVYAGFGALMLTTCI 502
BLAST of AM161836 vs. TrEMBL
Match: B8AKJ1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13676 PE=4 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.814e-34 Identity = 72/89 (80.90%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 T LP+ + +S NVKGISMLARDLQSIVLYD EGKF GVRRP+S LPI IDG+EIVI DAIGS+GLDLKTDPG+P+VYAGFGALMLTTCI Sbjct: 416 TLLPLENSDSSNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLDLKTDPGIPIVYAGFGALMLTTCI 504
BLAST of AM161836 vs. TrEMBL
Match: C0PHK9_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.983e-33 Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 1 Query: 1 TFLPVGDVNS--PNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLP+ D +S PNVKGISMLARDLQSIVLYD +GKF GVRRP+S LPI I+G+EI+I DAIGS+GLDLKTDPGVP+VYAGFGALMLTTCI Sbjct: 400 TFLPLEDSDSSNPNVKGISMLARDLQSIVLYDQDGKFVGVRRPSSKLPIEINGNEILIEDAIGSTGLDLKTDPGVPIVYAGFGALMLTTCI 490
BLAST of AM161836 vs. TrEMBL
Match: B6SYB5_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 1.983e-33 Identity = 73/91 (80.22%), Postives = 82/91 (90.11%), Query Frame = 1 Query: 1 TFLPVGDVNS--PNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLP+ D +S PNVKGISMLARDLQSIVLYD +GKF GVRRP+S LPI I+G+EI+I DAIGS+GLDLKTDPGVP+VYAGFGALMLTTCI Sbjct: 400 TFLPLEDSDSSNPNVKGISMLARDLQSIVLYDQDGKFVGVRRPSSKLPIEINGNEILIEDAIGSTGLDLKTDPGVPIVYAGFGALMLTTCI 490
BLAST of AM161836 vs. TrEMBL
Match: A9NVV5_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.508e-28 Identity = 66/90 (73.33%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 TFLPV-GDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLP+ D S KGIS+LARDLQS+VLYD EGKF GVRRP SN PI +DG IV+ DAIGS+GL+LK DPGVPVVYAGFGALMLTT I Sbjct: 198 TFLPLEDDSGSTKPKGISILARDLQSVVLYDQEGKFVGVRRPGSNRPITVDGVNIVVDDAIGSTGLELKMDPGVPVVYAGFGALMLTTII 287
BLAST of AM161836 vs. TrEMBL
Match: A9S1K3_PHYPA (Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42605 PE=4 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.682e-24 Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 +FLP+GD + + KGIS+LARDLQ++V YD EG F GVRRP S I ++ IV+ D IGS+GL+LK DPGVPVVYAGFG LMLTT I Sbjct: 306 SFLPLGDQGAADGKGISILARDLQTVVFYDQEGNFVGVRRPGSKKAITVNNVNIVVDDLIGSTGLELKADPGVPVVYAGFGGLMLTTII 394
BLAST of AM161836 vs. SwissProt
Match: CCS1_ARATH (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Arabidopsis thaliana GN=CCS1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.780e-37 Identity = 74/89 (83.15%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGD N+PNVKGISMLARDLQSIV+YD +GKFAG+RRP+S LPI I+G +IVI DAIGS+GL+LKTDPGVPVVYAGFGALMLTTCI Sbjct: 403 TFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRRPSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCI 491
BLAST of AM161836 vs. SwissProt
Match: CCS1_ORYSJ (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Oryza sativa subsp. japonica GN=CCS1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.439e-35 Identity = 72/89 (80.90%), Postives = 79/89 (88.76%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 T LP+ + S NVKGISMLARDLQSIVLYD EGKF GVRRP+S LPI IDG+EIVI DAIGS+GLDLKTDPG+P+VYAGFGALMLTTCI Sbjct: 417 TLLPLENSGSSNVKGISMLARDLQSIVLYDQEGKFVGVRRPSSKLPIEIDGNEIVIEDAIGSTGLDLKTDPGIPIVYAGFGALMLTTCI 505
BLAST of AM161836 vs. SwissProt
Match: CCS1_CHLRE (Cytochrome c biogenesis protein CCS1, chloroplastic OS=Chlamydomonas reinhardtii GN=CCS1 PE=1 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.683e-23 Identity = 51/91 (56.04%), Postives = 66/91 (72.53%), Query Frame = 1 Query: 1 TFLPVGDVNSPNV--KGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLP+ + KGIS+LARD QS+V YD +G+F GVRRP S PI ++G +V+ D G++GL+LK+DPGVP VYAGFG LM+TT I Sbjct: 456 TFLPLAEPGQDGSAPKGISILARDPQSVVFYDAKGQFVGVRRPGSGKPIEVEGLALVVEDVTGATGLELKSDPGVPAVYAGFGGLMVTTLI 546
BLAST of AM161836 vs. SwissProt
Match: CCS1_NOSP7 (Cytochrome c biogenesis protein CcsB OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ccsB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.237e-13 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 1 Query: 40 KGISMLARDLQSIVL-YDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G+S+LA+DLQ +VL YD GK R + +N G ++ I+D IGS+GL +K DPG+P+VY+GFG LML Sbjct: 335 EGVSLLAKDLQGMVLIYDPNGKLVDTVRAGMSTQVN--GVKLKILDVIGSTGLQIKADPGIPIVYSGFGLLML 405
BLAST of AM161836 vs. SwissProt
Match: CCS1_ANAVT (Cytochrome c biogenesis protein CcsB OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ccsB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.064e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 40 KGISMLARDLQSIVL-YDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G+S+LA+DLQ +VL YD +GK R + +N G + ++D +GS+GL +K DPG+P+VY GFG LML Sbjct: 334 EGVSLLAKDLQGMVLIYDAQGKLVDTVRAGMSTQVN--GVTLKVLDVVGSTGLQIKADPGIPIVYTGFGILML 404
BLAST of AM161836 vs. SwissProt
Match: CCS1_ANASP (Cytochrome c biogenesis protein CcsB OS=Anabaena sp. (strain PCC 7120) GN=ccsB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.064e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 40 KGISMLARDLQSIVL-YDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G+S+LA+DLQ +VL YD +GK R + +N G + ++D +GS+GL +K DPG+P+VY GFG LML Sbjct: 334 EGVSLLAKDLQGMVLIYDAQGKLVDTVRAGMSTQVN--GVTLKVLDVVGSTGLQIKADPGIPIVYTGFGILML 404
BLAST of AM161836 vs. SwissProt
Match: CCS1_MICAN (Cytochrome c biogenesis protein CcsB OS=Microcystis aeruginosa (strain NIES-843) GN=ccsB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.095e-12 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 40 KGISMLARDLQ-SIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G+S+L RDLQ ++++YD +G R +PIN G + IV+ +GS+GL +K DPGVP+VY GF LM+ Sbjct: 329 EGVSLLTRDLQGTVIVYDAQGDLTSAVREGMTIPIN--GVNLKIVELVGSTGLQIKADPGVPIVYLGFALLMM 399
BLAST of AM161836 vs. SwissProt
Match: CCS1_TRIEI (Cytochrome c biogenesis protein CcsB OS=Trichodesmium erythraeum (strain IMS101) GN=ccsB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.006e-11 Identity = 34/74 (45.95%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 40 KGISMLARDLQ-SIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLT 258 +G+S+LA+DLQ ++++YDT GK R + I + G + I IGS+GL +K DPG+P+VY GFG LML+ Sbjct: 330 EGVSLLAKDLQGNVLVYDTSGKLVASVR--EGMFIEVSGVTLFIDKIIGSTGLQIKADPGIPIVYLGFGLLMLS 401
BLAST of AM161836 vs. SwissProt
Match: CCS1_CYAA5 (Cytochrome c biogenesis protein CcsB OS=Cyanothece sp. (strain ATCC 51142) GN=ccsB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.624e-11 Identity = 34/73 (46.58%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 40 KGISMLARDLQ-SIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G+S+LA+DLQ ++++YD +G RP L IN G + I IGS+GL +K DPG+P VY GFG LM+ Sbjct: 331 EGVSLLAKDLQGTMMVYDQKGDLYSAVRPGMILDIN--GVRLKIYQLIGSTGLQIKADPGIPFVYTGFGLLMM 401
BLAST of AM161836 vs. SwissProt
Match: CCS1_SYNY3 (Cytochrome c biogenesis protein CcsB OS=Synechocystis sp. (strain PCC 6803) GN=ccsB PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.699e-10 Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 40 KGISMLARDLQ-SIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALML 255 +G ++L +DLQ ++++YD EG R S + IN G I I + +GS+GL +K DPG+P VY GFG LM+ Sbjct: 327 EGAALLVKDLQGTMIIYDQEGNLTDAVRAGSTVEIN--GVNITIKELVGSTGLQIKADPGIPFVYLGFGLLMV 397
BLAST of AM161836 vs. TAIR peptide
Match: AT1G49380.1 (| Symbols: | cytochrome c biogenesis protein family | chr1:18276794-18279204 FORWARD LENGTH=547) HSP 1 Score: 153.68 bits (387), Expect = 2.176e-38 Identity = 74/89 (83.15%), Postives = 83/89 (93.26%), Query Frame = 1 Query: 1 TFLPVGDVNSPNVKGISMLARDLQSIVLYDTEGKFAGVRRPNSNLPINIDGSEIVIVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCI 267 TFLPVGD N+PNVKGISMLARDLQSIV+YD +GKFAG+RRP+S LPI I+G +IVI DAIGS+GL+LKTDPGVPVVYAGFGALMLTTCI Sbjct: 403 TFLPVGDTNAPNVKGISMLARDLQSIVVYDLDGKFAGIRRPSSKLPIEINGMKIVIEDAIGSTGLELKTDPGVPVVYAGFGALMLTTCI 491 The following BLAST results are available for this feature:
BLAST of AM161836 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AM161836 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 10
BLAST of AM161836 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161836 ID=AM161836; Name=AM161836; organism=Pisum sativum; type=EST; length=268bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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