CD860389
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD860389 vs. TrEMBL
Match: B7FMZ2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.542e-12 Identity = 50/109 (45.87%), Postives = 53/109 (48.62%), Query Frame = 1 Query: 139 VLSRNETASSSITSSXXXXXXXXXQXXXXXXXXXXXXXXXH------YXXXXXXXXXXXXXXXXXXFRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRRLKF 447 VLSRNET+SSSITSS Y FRREV SAGIIQE KRRK FEN QDE+KRR+RD AKRNRR KF Sbjct: 45 VLSRNETSSSSITSSSSITSSSSSSPEPPQDMSSSFSTSNTVFSASPYNVQIIVEDDEPEERFLNRFRREVFSAGIIQECKRRKRFENPQDEKKRRVRDAAKRNRRNKF 153
BLAST of CD860389 vs. TrEMBL
Match: Q8VWX5_CUCSA (Ribosome-like protein (Fragment) OS=Cucumis sativus GN=rpo1 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.923e-10 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM AG+IQE KRR+FFENTQD RKR+ R+ AKRNRR Sbjct: 114 FRREVMRAGVIQECKRRRFFENTQDVRKRKTREAAKRNRR 153
BLAST of CD860389 vs. TrEMBL
Match: A5AI30_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031115 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.181e-9 Identity = 30/40 (75.00%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM AG+IQE KRR+FFEN QDE+KR+ R+ AKRNRR Sbjct: 111 FRREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRR 150
BLAST of CD860389 vs. TrEMBL
Match: Q9LI88_ARATH (Genomic DNA, chromosome 3, P1 clone:MYF5 OS=Arabidopsis thaliana GN=At3g27160 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.861e-9 Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM G+IQE KRR++FEN QDE+KRR RD AKRN++ Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKK 143
BLAST of CD860389 vs. TrEMBL
Match: Q94BT7_ARATH (AT3g27160/MYF5_3 OS=Arabidopsis thaliana PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.861e-9 Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM G+IQE KRR++FEN QDE+KRR RD AKRN++ Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKK 143
BLAST of CD860389 vs. TrEMBL
Match: D7LLW6_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484499 PE=4 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.861e-9 Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM G+IQE KRR++FEN QDE+KRR RD AKRN++ Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKK 143
BLAST of CD860389 vs. TrEMBL
Match: B9RBJ4_RICCO (Structural constituent of ribosome, putative OS=Ricinus communis GN=RCOM_1677380 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 5.861e-9 Identity = 28/40 (70.00%), Postives = 35/40 (87.50%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM AG+IQE KRR+FFEN QDE+KR+ R+ AKRN++ Sbjct: 99 FRREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNKK 138
BLAST of CD860389 vs. TrEMBL
Match: A9PGV4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_549690 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.799e-8 Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM AG+IQE KRR+F EN Q+E+KR++R+ KRNRR Sbjct: 100 FRREVMRAGVIQECKRRRFHENKQEEKKRKVREAHKRNRR 139
BLAST of CD860389 vs. TrEMBL
Match: D7SVR1_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_68.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00033105001 PE=4 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 9.357e-7 Identity = 25/35 (71.43%), Postives = 30/35 (85.71%), Query Frame = 1 Query: 334 MSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 M AG+IQE KRR+FFEN QDE+KR+ R+ AKRNRR Sbjct: 1 MRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRR 35
BLAST of CD860389 vs. TAIR peptide
Match: AT3G27160.1 (| Symbols: GHS1 | Ribosomal protein S21 family protein | chr3:10017531-10018854 FORWARD LENGTH=183) HSP 1 Score: 63.929 bits (154), Expect = 4.957e-11 Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 1 Query: 319 FRREVMSAGIIQESKRRKFFENTQDERKRRIRDTAKRNRR 438 FRREVM G+IQE KRR++FEN QDE+KRR RD AKRN++ Sbjct: 104 FRREVMRTGVIQECKRRRYFENKQDEKKRRTRDAAKRNKK 143 The following BLAST results are available for this feature:
BLAST of CD860389 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 9
BLAST of CD860389 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD860389 ID=CD860389; Name=CD860389; organism=Pisum sativum; type=EST; length=489bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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