EX569800

EST Overview
NameEX569800
Unique NameEX569800
TypeEST
OrganismPisum sativum (pea)
Sequence length440
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of EX569800 vs. Soybean peptides
Match: Glyma01g38500.1|PACid:16245612 ()

HSP 1 Score: 50.447 bits (119), Expect = 6.575e-7
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 2 
Query:    2 LYNFDIERYNKLKDVCSP-TIPPMFDSSFALTVGNSSQH 115
            L+NFDIE+YN+L+  CSP T+PP FD S AL   NSS H
Sbjct:  285 LHNFDIEKYNQLRAACSPTTMPPKFDPSIALPFDNSSIH 323
[Close]
BLAST of EX569800 vs. Medicago proteins
Match: IMGA|Medtr5g019350.1 (Coiled-coil domain-containing protein 109A (AHRD V1 *-*- Q3UMR5); contains Interpro domain(s) IPR006769 Protein of unknown function DUF607 chr05_pseudomolecule_IMGAG_V3.5 7044657-7042658 E EGN_Mt100125 20100825)

HSP 1 Score: 62.7734 bits (151), Expect = 7.709e-11
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 2 
Query:    2 LYNFDIERYNKLKDVCSPTIPPMFDSSFALTVGNSSQH 115
            L+NFDIE+YNKL +VCSP  PPMFDSS ALT GNS  H
Sbjct:  306 LHNFDIEKYNKLSNVCSPNAPPMFDSSTALTSGNSLHH 343
The following BLAST results are available for this feature:
BLAST of EX569800 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 1
Match NameE-valueIdentityDescription
Glyma01g38500.1|PACid:162456126.575e-761.54[more]
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BLAST of EX569800 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr5g019350.17.709e-1173.68Coiled-coil domain-containing protein 109A (AHRD V... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX569800 ID=EX569800; Name=EX569800; organism=Pisum sativum; type=EST; length=440bp
GCTTTACAATTTTGACATTGAAAGGTACAATAAGCTTAAGGATGTTTGTT
CTCCAACCATTCCTCCAATGTTTGATTCATCCTTTGCTCTCACAGTTGGT
AATTCTTCACAGCATCATTGATAAAGGAGAGTTAATTGGCCTGAAACAAA
AATAAAGATGTAGAATGTTACAGGGCCTTAGCTACTTGTTCTTGTTCATT
GACTTTAGAATACAGCAAATAGTTGCCCCGTTGGGCAACAATTTTTGGGG
TTTTTTAACTGAAATTTTTGGGTTTTTTTTCTAACATTTCGTATTATTAG
ATGTGATCATTAAGATACGTGCTAACTCTGTTAGAATTAGATGCGGCTTT
GTGTAAACTGATGCAGAGTGTTCAGTCCAAACTATCTTTTGTAAAATATC
ACATAATTTACATTACATTTTGAGATATCAAAGTTTCATT
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