CD859474

EST Overview
NameCD859474
Unique NameCD859474
TypeEST
OrganismPisum sativum (pea)
Sequence length527
Libraries
Library NameType
LIBEST_014000 F15cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of CD859474 vs. TrEMBL
Match: A7VLV1_PEA (Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.776e-53
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQL G
Sbjct:    1 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQG 104          
BLAST of CD859474 vs. TrEMBL
Match: A7VLV2_PEA (Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.123e-51
Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            MDTLTSAPLLT+KFKPSFSPQQKPCFPHRRRFENGKK QSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQL G
Sbjct:    1 MDTLTSAPLLTSKFKPSFSPQQKPCFPHRRRFENGKKKQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQG 104          
BLAST of CD859474 vs. TrEMBL
Match: Q5EMP6_SOYBN (Senescence-inducible chloroplast stay-green protein 2 OS=Glycine max GN=SGR2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.924e-35
Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT+ P+L +K  KPS SP+    FP+  R   GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G
Sbjct:    1 MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104          
BLAST of CD859474 vs. TrEMBL
Match: C6TB19_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.924e-35
Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT+ P+L +K  KPS SP+    FP+  R   GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G
Sbjct:    1 MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104          
BLAST of CD859474 vs. TrEMBL
Match: Q5EMP7_SOYBN (Putative uncharacterized protein OS=Glycine max GN=SGR1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.598e-35
Identity = 78/105 (74.29%), Postives = 88/105 (83.81%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT+ P+L +K  KPS SP     FP+  R   GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G
Sbjct:    1 MCTLTTVPVLPSKLNKPSLSPHHNSLFPYCGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104          
BLAST of CD859474 vs. TrEMBL
Match: D7TW96_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019884001 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.352e-33
Identity = 76/104 (73.08%), Postives = 84/104 (80.77%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT+A +L ++ KPSFSP Q+  F  RRR    KK+    PVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G
Sbjct:    1 MATLTAALVLPSELKPSFSPHQRSLFVCRRR---PKKSHPAFPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 101          
BLAST of CD859474 vs. TrEMBL
Match: B9GW45_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646534 PE=4 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.240e-33
Identity = 72/104 (69.23%), Postives = 83/104 (79.81%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M +L  AP L  K +PS   Q    FP +++ +  +KNQSI PVARLFGP+IFEASKLKVLFLG+DE KHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G
Sbjct:    1 MGSLAVAPFLPLKLRPSIFDQNSSLFPSKKKLK--RKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 102          
BLAST of CD859474 vs. TrEMBL
Match: A5BDD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009841 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.436e-32
Identity = 75/104 (72.12%), Postives = 82/104 (78.85%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT+A +L ++ KPSFS  Q   F  RRR    KK+    PVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G
Sbjct:    1 MATLTAALVLPSELKPSFSXHQXSLFVCRRR---PKKSHPAFPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 101          
BLAST of CD859474 vs. TrEMBL
Match: Q4JFW8_SOLLC (Green flesh protein OS=Solanum lycopersicum GN=SGR1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.875e-31
Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M TLT++ ++ +K     + QQ   F H+ R    KKNQSIVPVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G
Sbjct:    1 MGTLTTSLVVPSKLN---NEQQSSIFIHKTR-RKCKKNQSIVPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 100          
BLAST of CD859474 vs. TrEMBL
Match: B9GKR2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548540 PE=4 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.405e-31
Identity = 71/104 (68.27%), Postives = 81/104 (77.88%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M +L  AP L +K +PS   Q    F    + +  +KNQSI PVARLFGP+IFEASKLKVLFLG+DE KHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G
Sbjct:    1 MGSLAVAPFLPSKPRPSLFDQNSSLFSSSTKLK--RKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHPGNLPRTYTLTHSDMTAKLTLAISQTINNSQLQG 102          
BLAST of CD859474 vs. TAIR peptide
Match: AT4G22920.1 (| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:12016776-12017969 REVERSE LENGTH=268)

HSP 1 Score: 134.806 bits (338), Expect = 2.638e-32
Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENG----KKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M +L++  LL TK KP++S ++         F N     KKNQSIVPVARLFGPAIFE+SKLKVLFLG+DE KHP  LPRTYTLTHSD+T+KLTLAISQ+INNSQL G
Sbjct:    1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQG 108          
BLAST of CD859474 vs. TAIR peptide
Match: AT4G11910.1 (| Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:7156435-7157839 FORWARD LENGTH=271)

HSP 1 Score: 127.102 bits (318), Expect = 5.500e-30
Identity = 70/107 (65.42%), Postives = 80/107 (74.77%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKP---CFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M +L +  LL +K KP F  +      C   RR   +  KN+SIVPVARLFGPAIFEASKLKVLFLG+DE KHP  LPRTYTLTHSD+T+KLTLAISQ+INNSQL G
Sbjct:    1 MCSLATNLLLPSKMKPVFPEKLSTSSLCVTTRR---SKMKNRSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQG 104          
BLAST of CD859474 vs. TAIR peptide
Match: AT4G11911.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:7158150-7159440 FORWARD LENGTH=273)

HSP 1 Score: 118.242 bits (295), Expect = 2.555e-27
Identity = 61/104 (58.65%), Postives = 74/104 (71.15%), Query Frame = -2
Query:    5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316
            M +L ++ LL    KP FS +++          + +K QS+ PVARLFG AIFEASKL V FLG+DE KHP NLPRTYT THSD+T+KLTLAIS +INNSQL G
Sbjct:    1 MCSLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMFPVARLFGQAIFEASKLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQG 104          
BLAST of CD859474 vs. TAIR peptide
Match: AT1G44000.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:16708201-16709521 REVERSE LENGTH=260)

HSP 1 Score: 55.0694 bits (131), Expect = 2.656e-8
Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = -2
Query:    5 NQSIVPVARLFGP-AIFEASKLKVLFLG-IDENKHPGNL--PRTYTLTHSDVTSKLTLAISQTINNSQLPG 205
            N  +    RL  P A F++SKLKV FLG + ENK  G +  PRTY L+H D T+ LTL IS  IN  QL G
Sbjct:   57 NTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQLEG 127          
The following BLAST results are available for this feature:
BLAST of CD859474 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A7VLV1_PEA7.776e-5399.04Senescence-inducible chloroplast stay-green protei... [more]
A7VLV2_PEA1.123e-5197.12Senescence-inducible chloroplast stay-green protei... [more]
Q5EMP6_SOYBN1.924e-3574.29Senescence-inducible chloroplast stay-green protei... [more]
C6TB19_SOYBN1.924e-3574.29Putative uncharacterized protein OS=Glycine max PE... [more]
Q5EMP7_SOYBN5.598e-3574.29Putative uncharacterized protein OS=Glycine max GN... [more]
D7TW96_VITVI2.352e-3373.08Whole genome shotgun sequence of line PN40024, sca... [more]
B9GW45_POPTR5.240e-3369.23Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
A5BDD7_VITVI4.436e-3272.12Putative uncharacterized protein OS=Vitis vinifera... [more]
Q4JFW8_SOLLC2.875e-3171.15Green flesh protein OS=Solanum lycopersicum GN=SGR... [more]
B9GKR2_POPTR6.405e-3168.27Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of CD859474 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G22920.12.638e-3265.74| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:1... [more]
AT4G11910.15.500e-3065.42| Symbols: | INVOLVED IN: biological_process unkn... [more]
AT4G11911.12.555e-2758.65| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT1G44000.12.656e-850.70| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 42..51
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CD859474 ID=CD859474; Name=CD859474; organism=Pisum sativum; type=EST; length=527bp
CCATCCCTGGCAACTGAGAGTTGTTTATGGTTTGAGAAATTGCCAAAGTG
AGTTTTGAGGTAACATCACTATGTGTTAACGTATAAGTCCTCGGAAGATT
TCCTGGGTGTTTGTTTTCGTCAATTCCTAAGAACAAAACCTTAAGTTTCG
AAGCTTCAAATATAGCTGGTCCAAATAACCTAGCTACAGGAACAATTGAT
TGATTCTTCTTCCCATTCTCAAACCGTCTTCTATGCGGAAAACATGGTTT
CTGTTGAGGAGAAAACGAAGGTTTGAACTTAGTAGTGAGTAAAGGAGCAC
TCGTTAGAGTATCCATGTTCCTGAGCTAGATCCAATTTTTGCGGACTCTA
AAAAGAATCACCAAGGTTACGTGCTTATTATTCAAACAATAAAAGAGCGT
TGTTTAATGAATAATGAAGACAAGAGAAGCTTGGTTTTATTATGCTTTAC
TCTTTTGCTTGCTTGTTACTAGTGATGTATAAGATTCTTGTTTAGCTTTT
GCTTCTAACCTCGGCCGCGACCCACGC
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