CD859474
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD859474 vs. TrEMBL
Match: A7VLV1_PEA (Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 7.776e-53 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQL G Sbjct: 1 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQG 104
BLAST of CD859474 vs. TrEMBL
Match: A7VLV2_PEA (Senescence-inducible chloroplast stay-green protein OS=Pisum sativum GN=SGR PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.123e-51 Identity = 101/104 (97.12%), Postives = 102/104 (98.08%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 MDTLTSAPLLT+KFKPSFSPQQKPCFPHRRRFENGKK QSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQL G Sbjct: 1 MDTLTSAPLLTSKFKPSFSPQQKPCFPHRRRFENGKKKQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLQG 104
BLAST of CD859474 vs. TrEMBL
Match: Q5EMP6_SOYBN (Senescence-inducible chloroplast stay-green protein 2 OS=Glycine max GN=SGR2 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.924e-35 Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT+ P+L +K KPS SP+ FP+ R GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G Sbjct: 1 MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104
BLAST of CD859474 vs. TrEMBL
Match: C6TB19_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.924e-35 Identity = 78/105 (74.29%), Postives = 89/105 (84.76%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT+ P+L +K KPS SP+ FP+ R GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G Sbjct: 1 MGTLTTVPVLPSKLNKPSLSPRHNSLFPYYGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104
BLAST of CD859474 vs. TrEMBL
Match: Q5EMP7_SOYBN (Putative uncharacterized protein OS=Glycine max GN=SGR1 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.598e-35 Identity = 78/105 (74.29%), Postives = 88/105 (83.81%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKF-KPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT+ P+L +K KPS SP FP+ R GKKN+++VPVARLFGPAIFEASKLKVLFLG+DENKHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G Sbjct: 1 MCTLTTVPVLPSKLNKPSLSPHHNSLFPYCGR-RVGKKNKAMVPVARLFGPAIFEASKLKVLFLGVDENKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 104
BLAST of CD859474 vs. TrEMBL
Match: D7TW96_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00019884001 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.352e-33 Identity = 76/104 (73.08%), Postives = 84/104 (80.77%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT+A +L ++ KPSFSP Q+ F RRR KK+ PVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G Sbjct: 1 MATLTAALVLPSELKPSFSPHQRSLFVCRRR---PKKSHPAFPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 101
BLAST of CD859474 vs. TrEMBL
Match: B9GW45_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_646534 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.240e-33 Identity = 72/104 (69.23%), Postives = 83/104 (79.81%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M +L AP L K +PS Q FP +++ + +KNQSI PVARLFGP+IFEASKLKVLFLG+DE KHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G Sbjct: 1 MGSLAVAPFLPLKLRPSIFDQNSSLFPSKKKLK--RKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHPGNLPRTYTLTHSDITAKLTLAISQTINNSQLQG 102
BLAST of CD859474 vs. TrEMBL
Match: A5BDD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009841 PE=4 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.436e-32 Identity = 75/104 (72.12%), Postives = 82/104 (78.85%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT+A +L ++ KPSFS Q F RRR KK+ PVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G Sbjct: 1 MATLTAALVLPSELKPSFSXHQXSLFVCRRR---PKKSHPAFPVARLFGPAIFEASKLKVLFLGVDEKKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 101
BLAST of CD859474 vs. TrEMBL
Match: Q4JFW8_SOLLC (Green flesh protein OS=Solanum lycopersicum GN=SGR1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.875e-31 Identity = 74/104 (71.15%), Postives = 83/104 (79.81%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M TLT++ ++ +K + QQ F H+ R KKNQSIVPVARLFGPAIFEASKLKVLFLG+DE KHPG LPRTYTLTHSD+TSKLTLAISQTINNSQL G Sbjct: 1 MGTLTTSLVVPSKLN---NEQQSSIFIHKTR-RKCKKNQSIVPVARLFGPAIFEASKLKVLFLGVDEEKHPGKLPRTYTLTHSDITSKLTLAISQTINNSQLQG 100
BLAST of CD859474 vs. TrEMBL
Match: B9GKR2_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_548540 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 6.405e-31 Identity = 71/104 (68.27%), Postives = 81/104 (77.88%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M +L AP L +K +PS Q F + + +KNQSI PVARLFGP+IFEASKLKVLFLG+DE KHPGNLPRTYTLTHSD+T+KLTLAISQTINNSQL G Sbjct: 1 MGSLAVAPFLPSKPRPSLFDQNSSLFSSSTKLK--RKNQSISPVARLFGPSIFEASKLKVLFLGVDEKKHPGNLPRTYTLTHSDMTAKLTLAISQTINNSQLQG 102
BLAST of CD859474 vs. TAIR peptide
Match: AT4G22920.1 (| Symbols: ATNYE1, NYE1 | non-yellowing 1 | chr4:12016776-12017969 REVERSE LENGTH=268) HSP 1 Score: 134.806 bits (338), Expect = 2.638e-32 Identity = 71/108 (65.74%), Postives = 83/108 (76.85%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENG----KKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M +L++ LL TK KP++S ++ F N KKNQSIVPVARLFGPAIFE+SKLKVLFLG+DE KHP LPRTYTLTHSD+T+KLTLAISQ+INNSQL G Sbjct: 1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESSKLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQG 108
BLAST of CD859474 vs. TAIR peptide
Match: AT4G11910.1 (| Symbols: | INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: non-yellowing 1 (TAIR:AT4G22920.1); Has 206 Blast hits to 202 proteins in 67 species: Archae - 0; Bacteria - 86; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr4:7156435-7157839 FORWARD LENGTH=271) HSP 1 Score: 127.102 bits (318), Expect = 5.500e-30 Identity = 70/107 (65.42%), Postives = 80/107 (74.77%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKP---CFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M +L + LL +K KP F + C RR + KN+SIVPVARLFGPAIFEASKLKVLFLG+DE KHP LPRTYTLTHSD+T+KLTLAISQ+INNSQL G Sbjct: 1 MCSLATNLLLPSKMKPVFPEKLSTSSLCVTTRR---SKMKNRSIVPVARLFGPAIFEASKLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQG 104
BLAST of CD859474 vs. TAIR peptide
Match: AT4G11911.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:7158150-7159440 FORWARD LENGTH=273) HSP 1 Score: 118.242 bits (295), Expect = 2.555e-27 Identity = 61/104 (58.65%), Postives = 74/104 (71.15%), Query Frame = -2 Query: 5 MDTLTSAPLLTTKFKPSFSPQQKPCFPHRRRFENGKKNQSIVPVARLFGPAIFEASKLKVLFLGIDENKHPGNLPRTYTLTHSDVTSKLTLAISQTINNSQLPG 316 M +L ++ LL KP FS +++ + +K QS+ PVARLFG AIFEASKL V FLG+DE KHP NLPRTYT THSD+T+KLTLAIS +INNSQL G Sbjct: 1 MCSLMASLLLPANLKPDFSDKERSSSIPSTTRSSKRKKQSMFPVARLFGQAIFEASKLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQG 104
BLAST of CD859474 vs. TAIR peptide
Match: AT1G44000.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11911.1); Has 216 Blast hits to 212 proteins in 76 species: Archae - 0; Bacteria - 96; Metazoa - 0; Fungi - 0; Plants - 118; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:16708201-16709521 REVERSE LENGTH=260) HSP 1 Score: 55.0694 bits (131), Expect = 2.656e-8 Identity = 36/71 (50.70%), Postives = 43/71 (60.56%), Query Frame = -2 Query: 5 NQSIVPVARLFGP-AIFEASKLKVLFLG-IDENKHPGNL--PRTYTLTHSDVTSKLTLAISQTINNSQLPG 205 N + RL P A F++SKLKV FLG + ENK G + PRTY L+H D T+ LTL IS IN QL G Sbjct: 57 NTLVSEAVRLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQLEG 127 The following BLAST results are available for this feature:
BLAST of CD859474 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD859474 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD859474 ID=CD859474; Name=CD859474; organism=Pisum sativum; type=EST; length=527bpback to top |