FG532885

EST Overview
NameFG532885
Unique NameFG532885
TypeEST
OrganismPisum sativum (pea)
Sequence length497
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG532885 vs. TrEMBL
Match: A2Q1V9_MEDTR (RNA-binding region RNP-1 (RNA recognition motif) OS=Medicago truncatula GN=MtrDRAFT_AC149129g30v2 PE=4 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.479e-46
Identity = 97/145 (66.90%), Postives = 106/145 (73.10%), Query Frame = 2
Query:    2 RHSSYRDYPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPP-PHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYGR 433
            R  SYRDYPARDSGY DLHR+ SRTAPRR +LD+ +D+RLER P P P LSYREGRP DYD LSGSKRPYAA+DDISP+YAD  ARQSRSRLDYDYGGS S+YRE+YGDR                       AYSSRQD SYGR
Sbjct:  580 RGPSYRDYPARDSGYPDLHRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAYGDR-LERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGR 723          
BLAST of FG532885 vs. TrEMBL
Match: D7SM13_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018314001 PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 4.877e-32
Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            R  SYRD Y  R SGYSD+ RN SRTA RR + D+ + QR ER PPP   SYREGRP DYD+++GSKRPY A+DD+ P+YAD   RQSR+RLDY+     SQY ++YGDR                        YSSRQ M YG
Sbjct:  616 RRPSYRDDYATRGSGYSDIPRNTSRTAARRTYEDDAYGQRFERPPPP---SYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGDAYGDR-LGRSNLGYGGSRSSMSSQDSHGLYSSRQGMGYG 755          
BLAST of FG532885 vs. TrEMBL
Match: B9SKE9_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0658490 PE=4 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.592e-29
Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDA--RQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            R  SYRD Y +R SGYSD+ R  SR++ RR ++D+ + QRLER PP    SYREGR  DYD++SGSKRPY+AMDD+ P+YAD  A  R SR+RLDY+ G S SQY ++YGDR                        Y+SRQ M YG
Sbjct:  588 RRQSYRDDYSSRGSGYSDIPRGTSRSSARRAYVDDGYGQRLERHPP----SYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDR-IGRSSVGYGGSRSSLSSQDSHGLYTSRQGMGYG 728          
BLAST of FG532885 vs. TrEMBL
Match: Q8RWQ1_ARATH (At2g44720/F16B22.21 OS=Arabidopsis thaliana GN=At2g44710 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.273e-28
Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            RH SYRD YP R SGYSDL R++SR+  RR  +D+++  R ER P     SY EGRP  Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G   SQY ESYGDR                        YSSRQ M YG
Sbjct:  620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755          
BLAST of FG532885 vs. TrEMBL
Match: O80511_ARATH (Putative uncharacterized protein At2g44720 OS=Arabidopsis thaliana GN=At2g44720 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.273e-28
Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            RH SYRD YP R SGYSDL R++SR+  RR  +D+++  R ER P     SY EGRP  Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G   SQY ESYGDR                        YSSRQ M YG
Sbjct:   50 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 185          
BLAST of FG532885 vs. TrEMBL
Match: Q0WLB4_ARATH (Putative uncharacterized protein At2g44720 OS=Arabidopsis thaliana GN=At2g44720 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.288e-28
Identity = 74/144 (51.39%), Postives = 84/144 (58.33%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            RH SYRD YP R SGYSDL R++SR+  RR  +D+++  R ER P     SY EGRP  Y+ L GSKRPYAA+DD  P+YAD D R SR RLDYD G   SQY ESYGDR                        YSSRQ M YG
Sbjct:  620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDFPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755          
BLAST of FG532885 vs. TrEMBL
Match: D7LLP8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483601 PE=4 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.288e-28
Identity = 75/144 (52.08%), Postives = 84/144 (58.33%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            RH SYRD YP R SGYSDL R++SR+  RR  +D+ +  R ER P     SY EGRP  Y+ L GSKRPYAA+DDI P+YAD D R SR RLDYD G   SQY ESYGDR                        YSSRQ M YG
Sbjct:  616 RHLSYRDDYPPRGSGYSDLPRSSSRSEMRRPFVDDPYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDIPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSSHDSRGPYSSRQGMDYG 751          
BLAST of FG532885 vs. TrEMBL
Match: B9MV50_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_286469 PE=4 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.770e-27
Identity = 69/144 (47.92%), Postives = 86/144 (59.72%), Query Frame = 2
Query:    2 RHSSYR-DYPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            R  SYR DY +R + YSDL R+ SRT+ RR + D+ ++QR ER PP    SY EGR  DYD+++GSKRPY+A+DDI P+YAD  AR SR RLDY+ G   SQY ++Y DR                        YSSRQ M YG
Sbjct:   49 RRPSYREDYSSRGTSYSDLPRSTSRTSARRAYADDGYNQRYERPPP----SYHEGRSRDYDSVAGSKRPYSAIDDIPPRYADAGARHSRPRLDYELGSRASQYGDAYSDR-LGRSAVGYGGSRNSISSQDSHGMYSSRQGMGYG 187          
BLAST of FG532885 vs. TrEMBL
Match: B8ASM2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16837 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.331e-21
Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 2
Query:   20 DYPARDSGYSDLH-RNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDR 328
            DY  R S YSDL  R+A R + RR ++D+ +  +++RS P    +YREGR  DYDT+SGSKR YA MDD+ P+Y D   RQS++RLDYD GGS ++Y ++Y +R
Sbjct:  385 DYSPRGSAYSDLGPRSAPRLSDRRAYIDDGYGGKIDRSLP----TYREGRGRDYDTMSGSKRSYAEMDDVPPRYHDISVRQSKARLDYDVGGSSARYADTYSER 484          
BLAST of FG532885 vs. TrEMBL
Match: Q8LJR0_MAIZE (Water-stress protein OS=Zea mays GN=ws1 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.874e-21
Identity = 55/110 (50.00%), Postives = 76/110 (69.09%), Query Frame = 2
Query:    2 RHSSYRDYPARDSGYSDLH-RNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDR 328
            R S   DY  R SGYSDL  R+A R + RR + D+ + ++ +R    P ++YREGR  DYDT+SGSKRPYA MDD+ P+Y +   RQS++RLDYD GGS ++Y ++Y +R
Sbjct:  287 RPSLRDDYSPRGSGYSDLGPRSAPRLSDRRAYADDSYGEKFDR----PLVAYREGRGRDYDTISGSKRPYADMDDV-PRYQEIGVRQSKARLDYDIGGSSARYGDTYSER 391          
BLAST of FG532885 vs. TAIR peptide
Match: AT2G44710.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18432902-18436629 FORWARD LENGTH=809)

HSP 1 Score: 127.487 bits (319), Expect = 3.755e-30
Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2
Query:    2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430
            RH SYRD YP R SGYSDL R++SR+  RR  +D+++  R ER P     SY EGRP  Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G   SQY ESYGDR                        YSSRQ M YG
Sbjct:  620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755          
The following BLAST results are available for this feature:
BLAST of FG532885 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 10
Match NameE-valueIdentityDescription
A2Q1V9_MEDTR3.479e-4666.90RNA-binding region RNP-1 (RNA recognition motif) O... [more]
D7SM13_VITVI4.877e-3251.39Whole genome shotgun sequence of line PN40024, sca... [more]
B9SKE9_RICCO6.592e-2950.00RNA binding protein, putative OS=Ricinus communis ... [more]
Q8RWQ1_ARATH4.273e-2851.39At2g44720/F16B22.21 OS=Arabidopsis thaliana GN=At2... [more]
O80511_ARATH4.273e-2851.39Putative uncharacterized protein At2g44720 OS=Arab... [more]
Q0WLB4_ARATH7.288e-2851.39Putative uncharacterized protein At2g44720 OS=Arab... [more]
D7LLP8_ARALY7.288e-2852.08Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9MV50_POPTR2.770e-2747.92Predicted protein (Fragment) OS=Populus trichocarp... [more]
B8ASM2_ORYSI1.331e-2150.96Putative uncharacterized protein OS=Oryza sativa s... [more]
Q8LJR0_MAIZE3.874e-2150.00Water-stress protein OS=Zea mays GN=ws1 PE=2 SV=1[more]
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BLAST of FG532885 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT2G44710.13.755e-3051.39| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 111..132
score: NAcoord: 145..165
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532885 ID=FG532885; Name=FG532885; organism=Pisum sativum; type=EST; length=497bp
AAGACATTCATCTTATAGAGATTATCCAGCCCGTGACTCTGGCTACTCTG
ATCTGCATAGGAATGCGTCTCGTACTGCACCAAGGAGGGATCATCTAGAT
GAAATCTTTGATCAAAGACTTGAAAGGTCTCCTCCTCCTCCCCATCTAAG
TTATCGTGAAGGGCGCCCACATGATTATGACACACTATCTGGCTCAAAAC
GTCCTTATGCTGCCATGGATGATATTTCTCCACAGTATGCTGATCCTGAT
GCTCGCCAATCAAGATCTCGATTAGACTATGACTACGGAGGCAGTGTTTC
ACAATATAGAGAGTCTTATGGTGATAGGCATGGAAGATCTAGTTTGGGAT
ATAATAGTGGCAGTAGAAGTTCTAGTTCTATTCAAAACTCACATGGGGCG
TATAGCAGTCGACAGGACATGAGTTATGGTAGAGGTTCTATTGGCGCTAG
TGATGGGGGTATCTACTCATCAAGTTATGGTGGGGATTACATATCTC
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