FG532885
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG532885 vs. TrEMBL
Match: A2Q1V9_MEDTR (RNA-binding region RNP-1 (RNA recognition motif) OS=Medicago truncatula GN=MtrDRAFT_AC149129g30v2 PE=4 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 3.479e-46 Identity = 97/145 (66.90%), Postives = 106/145 (73.10%), Query Frame = 2 Query: 2 RHSSYRDYPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPP-PHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYGR 433 R SYRDYPARDSGY DLHR+ SRTAPRR +LD+ +D+RLER P P P LSYREGRP DYD LSGSKRPYAA+DDISP+YAD ARQSRSRLDYDYGGS S+YRE+YGDR AYSSRQD SYGR Sbjct: 580 RGPSYRDYPARDSGYPDLHRDTSRTAPRRGYLDDGYDRRLERPPSPSPRLSYREGRPRDYDALSGSKRPYAAIDDISPRYADAGARQSRSRLDYDYGGSASRYREAYGDR-LERSSLGYSGSRSSLSNQNSHGAYSSRQDPSYGR 723
BLAST of FG532885 vs. TrEMBL
Match: D7SM13_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00018314001 PE=4 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.877e-32 Identity = 74/144 (51.39%), Postives = 88/144 (61.11%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 R SYRD Y R SGYSD+ RN SRTA RR + D+ + QR ER PPP SYREGRP DYD+++GSKRPY A+DD+ P+YAD RQSR+RLDY+ SQY ++YGDR YSSRQ M YG Sbjct: 616 RRPSYRDDYATRGSGYSDIPRNTSRTAARRTYEDDAYGQRFERPPPP---SYREGRPRDYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGDAYGDR-LGRSNLGYGGSRSSMSSQDSHGLYSSRQGMGYG 755
BLAST of FG532885 vs. TrEMBL
Match: B9SKE9_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0658490 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 6.592e-29 Identity = 73/146 (50.00%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDA--RQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 R SYRD Y +R SGYSD+ R SR++ RR ++D+ + QRLER PP SYREGR DYD++SGSKRPY+AMDD+ P+YAD A R SR+RLDY+ G S SQY ++YGDR Y+SRQ M YG Sbjct: 588 RRQSYRDDYSSRGSGYSDIPRGTSRSSARRAYVDDGYGQRLERHPP----SYREGRARDYDSISGSKRPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDR-IGRSSVGYGGSRSSLSSQDSHGLYTSRQGMGYG 728
BLAST of FG532885 vs. TrEMBL
Match: Q8RWQ1_ARATH (At2g44720/F16B22.21 OS=Arabidopsis thaliana GN=At2g44710 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.273e-28 Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 RH SYRD YP R SGYSDL R++SR+ RR +D+++ R ER P SY EGRP Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G SQY ESYGDR YSSRQ M YG Sbjct: 620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755
BLAST of FG532885 vs. TrEMBL
Match: O80511_ARATH (Putative uncharacterized protein At2g44720 OS=Arabidopsis thaliana GN=At2g44720 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.273e-28 Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 RH SYRD YP R SGYSDL R++SR+ RR +D+++ R ER P SY EGRP Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G SQY ESYGDR YSSRQ M YG Sbjct: 50 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 185
BLAST of FG532885 vs. TrEMBL
Match: Q0WLB4_ARATH (Putative uncharacterized protein At2g44720 OS=Arabidopsis thaliana GN=At2g44720 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.288e-28 Identity = 74/144 (51.39%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 RH SYRD YP R SGYSDL R++SR+ RR +D+++ R ER P SY EGRP Y+ L GSKRPYAA+DD P+YAD D R SR RLDYD G SQY ESYGDR YSSRQ M YG Sbjct: 620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDFPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755
BLAST of FG532885 vs. TrEMBL
Match: D7LLP8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483601 PE=4 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 7.288e-28 Identity = 75/144 (52.08%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 RH SYRD YP R SGYSDL R++SR+ RR +D+ + R ER P SY EGRP Y+ L GSKRPYAA+DDI P+YAD D R SR RLDYD G SQY ESYGDR YSSRQ M YG Sbjct: 616 RHLSYRDDYPPRGSGYSDLPRSSSRSEMRRPFVDDPYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDIPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSSHDSRGPYSSRQGMDYG 751
BLAST of FG532885 vs. TrEMBL
Match: B9MV50_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_286469 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 2.770e-27 Identity = 69/144 (47.92%), Postives = 86/144 (59.72%), Query Frame = 2 Query: 2 RHSSYR-DYPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 R SYR DY +R + YSDL R+ SRT+ RR + D+ ++QR ER PP SY EGR DYD+++GSKRPY+A+DDI P+YAD AR SR RLDY+ G SQY ++Y DR YSSRQ M YG Sbjct: 49 RRPSYREDYSSRGTSYSDLPRSTSRTSARRAYADDGYNQRYERPPP----SYHEGRSRDYDSVAGSKRPYSAIDDIPPRYADAGARHSRPRLDYELGSRASQYGDAYSDR-LGRSAVGYGGSRNSISSQDSHGMYSSRQGMGYG 187
BLAST of FG532885 vs. TrEMBL
Match: B8ASM2_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16837 PE=4 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.331e-21 Identity = 53/104 (50.96%), Postives = 73/104 (70.19%), Query Frame = 2 Query: 20 DYPARDSGYSDLH-RNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDR 328 DY R S YSDL R+A R + RR ++D+ + +++RS P +YREGR DYDT+SGSKR YA MDD+ P+Y D RQS++RLDYD GGS ++Y ++Y +R Sbjct: 385 DYSPRGSAYSDLGPRSAPRLSDRRAYIDDGYGGKIDRSLP----TYREGRGRDYDTMSGSKRSYAEMDDVPPRYHDISVRQSKARLDYDVGGSSARYADTYSER 484
BLAST of FG532885 vs. TrEMBL
Match: Q8LJR0_MAIZE (Water-stress protein OS=Zea mays GN=ws1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.874e-21 Identity = 55/110 (50.00%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 2 RHSSYRDYPARDSGYSDLH-RNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDR 328 R S DY R SGYSDL R+A R + RR + D+ + ++ +R P ++YREGR DYDT+SGSKRPYA MDD+ P+Y + RQS++RLDYD GGS ++Y ++Y +R Sbjct: 287 RPSLRDDYSPRGSGYSDLGPRSAPRLSDRRAYADDSYGEKFDR----PLVAYREGRGRDYDTISGSKRPYADMDDV-PRYQEIGVRQSKARLDYDIGGSSARYGDTYSER 391
BLAST of FG532885 vs. TAIR peptide
Match: AT2G44710.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:18432902-18436629 FORWARD LENGTH=809) HSP 1 Score: 127.487 bits (319), Expect = 3.755e-30 Identity = 74/144 (51.39%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 2 RHSSYRD-YPARDSGYSDLHRNASRTAPRRDHLDEIFDQRLERSPPPPHLSYREGRPHDYDTLSGSKRPYAAMDDISPQYADPDARQSRSRLDYDYGGSVSQYRESYGDRHXXXXXXXXXXXXXXXXXXXXXXAYSSRQDMSYG 430 RH SYRD YP R SGYSDL R++SR+ RR +D+++ R ER P SY EGRP Y+ L GSKRPYAA+DD+ P+YAD D R SR RLDYD G SQY ESYGDR YSSRQ M YG Sbjct: 620 RHLSYRDDYPPRGSGYSDLPRSSSRSEIRRPFVDDLYSPRFERPP-----SYSEGRPRAYEPLPGSKRPYAALDDLPPRYADVDVRHSRPRLDYDVG--PSQYGESYGDR-IPRSSLGYGSSRNSMSNHDSRGPYSSRQGMDYG 755 The following BLAST results are available for this feature:
BLAST of FG532885 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG532885 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG532885 ID=FG532885; Name=FG532885; organism=Pisum sativum; type=EST; length=497bpback to top |