FG532260
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG532260 vs. TrEMBL
Match: B9H398_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555959 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.561e-9 Identity = 38/59 (64.41%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR +CQFFGS ND LPPQV L H GGLG S KPDA+SPSEFM Sbjct: 341 MQILGVMARFICQFFGSANDGLGGGLGG-LPPQVLQNLQHPGGLGDSGKPDANSPSEFM 398
BLAST of FG532260 vs. TrEMBL
Match: D7TSS7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030867001 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.021e-8 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR++CQFFGS ND LPPQV L H GLG + KPDA+SPS+FM Sbjct: 265 MQILGVMARLVCQFFGSAND-GLGGGLGALPPQVLQNLQHPVGLGDNGKPDANSPSQFM 322
BLAST of FG532260 vs. TrEMBL
Match: A5AZL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026134 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 5.021e-8 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR++CQFFGS ND LPPQV L H GLG + KPDA+SPS+FM Sbjct: 332 MQILGVMARLVCQFFGSAND-GLGGGLGALPPQVLQNLQHPVGLGDNGKPDANSPSQFM 389
BLAST of FG532260 vs. TrEMBL
Match: B9H398_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_555959 PE=4 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 1.952e-9 Identity = 38/59 (64.41%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR +CQFFGS ND LPPQV L H GGLG S KPDA+SPSEFM Sbjct: 341 MQILGVMARFICQFFGSANDGLGGGLGG-LPPQVLQNLQHPGGLGDSGKPDANSPSEFM 398
BLAST of FG532260 vs. TrEMBL
Match: D7TSS7_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_6.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00030867001 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.279e-8 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR++CQFFGS ND LPPQV L H GLG + KPDA+SPS+FM Sbjct: 265 MQILGVMARLVCQFFGSAND-GLGGGLGALPPQVLQNLQHPVGLGDNGKPDANSPSQFM 322
BLAST of FG532260 vs. TrEMBL
Match: A5AZL6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026134 PE=4 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.279e-8 Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQV---LHHGGGLG-SVKPDASSPSEFM 165 MQ+LGVMAR++CQFFGS ND LPPQV L H GLG + KPDA+SPS+FM Sbjct: 332 MQILGVMARLVCQFFGSAND-GLGGGLGALPPQVLQNLQHPVGLGDNGKPDANSPSQFM 389
BLAST of FG532260 vs. Lotus protein
Match: chr2.CM0405.90.r2.d (- phase: 0 /pseudo) HSP 1 Score: 71.2478 bits (173), Expect = 1.566e-13 Identity = 39/63 (61.90%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQVLHHGGGLGSVKPDASSPSEFM*KFVPFHL 189 MQVLGV+ARILCQFFGS +D LPPQ LHH GL +VKPDA+SPSEF+* PF + Sbjct: 278 MQVLGVIARILCQFFGSRSDGLGAGLG-ALPPQDLHHADGLENVKPDANSPSEFI*N--PFRI 337
BLAST of FG532260 vs. Medicago proteins
Match: IMGA|Medtr5g079680.1 (M404 (AHRD V1 *-*- Q7XA58_LILLO) chr05_pseudomolecule_IMGAG_V3.5 33066024-33064250 E EGN_Mt100125 20100825) HSP 1 Score: 93.2041 bits (230), Expect = 5.517e-20 Identity = 45/55 (81.82%), Postives = 46/55 (83.64%), Query Frame = 1 Query: 1 MQVLGVMARILCQFFGSGNDXXXXXXXXTLPPQVLHHGGGLGSVKPDASSPSEFM 165 MQVLGVMARILCQFFGSGND TLP QVLHHGGGLG+VKPDASSPSEFM Sbjct: 274 MQVLGVMARILCQFFGSGNDGLGGAGLGTLPTQVLHHGGGLGNVKPDASSPSEFM 328 The following BLAST results are available for this feature:
BLAST of FG532260 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 3
BLAST of FG532260 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl) Total hits: 3
BLAST of FG532260 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins) Total hits: 1
BLAST of FG532260 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v2
Date Performed: 2011-04-27
Analysis Name: InterProScan analysis for Pisum sativum unigene v1 Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG532260 ID=FG532260; Name=FG532260; organism=Pisum sativum; type=EST; length=446bpback to top |