CD860270
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD860270 vs. TrEMBL
Match: D7SI19_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00007875001 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.087e-31 Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = -3 Query: 213 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHSIK*LVG 491 +NIRLE++NS+R S RAF PRFPK+K E WWLVLGNTSTSEL+ALKRVSF+D LVT MKLP T NLQ +K+ LVSDCYIGFEQEHSI+ L G Sbjct: 1996 LNIRLERMNSKRKSLRAFAPRFPKVKNEAWWLVLGNTSTSELFALKRVSFADRLVTHMKLPSSTPTNLQGMKLILVSDCYIGFEQEHSIEELDG 2089
BLAST of CD860270 vs. TrEMBL
Match: A5BGX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003945 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.087e-31 Identity = 69/94 (73.40%), Postives = 79/94 (84.04%), Query Frame = -3 Query: 213 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHSIK*LVG 491 +NIRLE++NS+R S RAF PRFPK+K E WWLVLGNTSTSEL+ALKRVSF+D LVT MKLP T NLQ +K+ LVSDCYIGFEQEHSI+ L G Sbjct: 336 LNIRLERMNSKRKSLRAFAPRFPKVKNEAWWLVLGNTSTSELFALKRVSFADRLVTHMKLPSSTPTNLQGMKLILVSDCYIGFEQEHSIEELDG 429
BLAST of CD860270 vs. TrEMBL
Match: B9RLP5_RICCO (Activating signal cointegrator 1 complex subunit 3, helc1, putative OS=Ricinus communis GN=RCOM_1469910 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.419e-31 Identity = 65/92 (70.65%), Postives = 78/92 (84.78%), Query Frame = -3 Query: 216 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK*LV 491 +NI+LEK NSR+ +SRAFVPRFPKIK+E WWL+LGNTSTSELYALKRV+FSD LVT M +P + Q+IK+ LVSDCY+GFEQEH I+ LV Sbjct: 2000 LNIKLEKTNSRKSTSRAFVPRFPKIKDEAWWLILGNTSTSELYALKRVTFSDRLVTHMDIPSSLTTFQEIKLMLVSDCYLGFEQEHCIEELV 2091
BLAST of CD860270 vs. TrEMBL
Match: Q9FNQ1_ARATH (RNA helicase OS=Arabidopsis thaliana GN=At5g61140 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.374e-26 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 + IRLEK S+R+SSRA PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+ L+T M+LP + QD K+ LVSDCY+GFEQEHSI+ Sbjct: 2064 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2151
BLAST of CD860270 vs. TrEMBL
Match: Q8RY91_ARATH (Putative RNA helicase (Fragment) OS=Arabidopsis thaliana GN=At5g61140 PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.374e-26 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 + IRLEK S+R+SSRA PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+ L+T M+LP + QD K+ LVSDCY+GFEQEHSI+ Sbjct: 712 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 799
BLAST of CD860270 vs. TrEMBL
Match: D7MUH8_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_919354 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.795e-26 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 + IRLEK S+R+SSRA PRFPK+K+E WWLVLG+ STSEL+A+KRVSF+ L+T M+LP T + QD K+ LVSDCY+GFEQEHSI+ Sbjct: 2020 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDISTSELFAVKRVSFTGRLITRMELPPTITSFQDTKLILVSDCYLGFEQEHSIE 2107
BLAST of CD860270 vs. TrEMBL
Match: D5ACR9_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 9.850e-25 Identity = 53/82 (64.63%), Postives = 64/82 (78.05%), Query Frame = -3 Query: 228 KLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 473 KL + SRAF PRFPKIK+E WWLVLGNT T ELYALKR+SFSDHL TSM + Q NL+ K+ LVSDCY+GFEQ++++ Sbjct: 101 KLRRTKSGSRAFAPRFPKIKDEAWWLVLGNTKTWELYALKRISFSDHLTTSMVITPDQMNLEGTKLLLVSDCYLGFEQQYTV 182
BLAST of CD860270 vs. TrEMBL
Match: C5WSU0_SORBI (Putative uncharacterized protein Sb01g042980 OS=Sorghum bicolor GN=Sb01g042980 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.683e-22 Identity = 52/90 (57.78%), Postives = 71/90 (78.89%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 +NIRL+ NSRR +SRAF PRFPK K+E WWLVLGN ++SELY LKR+SF+D +V T M+LP+ + Q+ K+ LVSDCY+GF+ E+ ++ Sbjct: 1991 LNIRLQLKNSRRSASRAFAPRFPKAKQEAWWLVLGNATSSELYGLKRISFADRVVNTRMELPQ-MFDAQETKLILVSDCYLGFDLEYYLE 2079
BLAST of CD860270 vs. TrEMBL
Match: Q10Q15_ORYSJ (Activating signal cointegrator 1 complex subunit 3, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g11470 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.127e-20 Identity = 50/90 (55.56%), Postives = 70/90 (77.78%), Query Frame = -3 Query: 228 IINIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 494 I++IRL+ ++RR +SRAF PRFPK K+E WWLVLGN +SELY LKR++F D +V T M+LP ++Q+ K+ LVSD Y+GF+QE+S+ Sbjct: 1031 ILSIRLQMKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYGLKRINFMDRVVNTRMELP-AMFDIQETKLILVSDSYLGFDQEYSL 1119
BLAST of CD860270 vs. TrEMBL
Match: Q0DU12_ORYSJ (Os03g0213400 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0213400 PE=4 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.127e-20 Identity = 50/90 (55.56%), Postives = 70/90 (77.78%), Query Frame = -3 Query: 228 IINIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLV-TSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSI 494 I++IRL+ ++RR +SRAF PRFPK K+E WWLVLGN +SELY LKR++F D +V T M+LP ++Q+ K+ LVSD Y+GF+QE+S+ Sbjct: 1044 ILSIRLQMKDARRSTSRAFSPRFPKAKQEAWWLVLGNIRSSELYGLKRINFMDRVVNTRMELP-AMFDIQETKLILVSDSYLGFDQEYSL 1132
BLAST of CD860270 vs. SwissProt
Match: RBS3_PEA (Ribulose bisphosphate carboxylase small chain 3A, chloroplastic OS=Pisum sativum GN=RBCS-3A PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.809e-20 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY Sbjct: 132 FGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180
BLAST of CD860270 vs. SwissProt
Match: RBS2_PEA (Ribulose bisphosphate carboxylase small chain 3C, chloroplastic OS=Pisum sativum GN=RBCS-3C PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.809e-20 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY Sbjct: 132 FGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 180
BLAST of CD860270 vs. SwissProt
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.770e-17 Identity = 41/49 (83.67%), Postives = 47/49 (95.92%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TTD +QV+KE+DEVVAAYP+AFVR+IGF+NVRQVQCISFIAHTPESY Sbjct: 88 FGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTPESY 136
BLAST of CD860270 vs. SwissProt
Match: RBS_MEDSA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.123e-14 Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD+SQVLKEL + A YP +F+RIIGFDNVRQVQCISFIAHTP++Y Sbjct: 132 FGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQVQCISFIAHTPKNY 180
BLAST of CD860270 vs. SwissProt
Match: RBS_TRIRP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.328e-14 Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TTDA+QVLKE+ E A YP+AF+RIIGFDNVRQVQCISFIA TP+ Y Sbjct: 130 FGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKVY 178
BLAST of CD860270 vs. SwissProt
Match: RBS_GLYTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tabacina GN=RBCS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.958e-14 Identity = 37/49 (75.51%), Postives = 40/49 (81.63%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TDASQVLKEL E AYP AF+RIIGFDNVRQVQCISFIA+ P S+ Sbjct: 130 FGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. SwissProt
Match: RBS_PYRPY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD+SQVLKEL+E AYPQ+F+RIIGFDNVRQVQCISFIA+ P + Sbjct: 135 FGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
BLAST of CD860270 vs. SwissProt
Match: RBS_MALSP (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Malus sp. GN=RBCS PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD+SQVLKEL+E AYPQ+F+RIIGFDNVRQVQCISFIA+ P + Sbjct: 135 FGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQVQCISFIAYKPAGF 183
BLAST of CD860270 vs. SwissProt
Match: RBS_GLYTO (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Glycine tomentella GN=RBCS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13 Identity = 36/49 (73.47%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TDASQVLKEL E AYP F+RIIGFDNVRQVQCISFIA+ P S+ Sbjct: 130 FGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. SwissProt
Match: RBS8_NICPL (Ribulose bisphosphate carboxylase small chain 8B, chloroplastic OS=Nicotiana plumbaginifolia GN=RBCS-8B PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.025e-13 Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TDA+QVL E++E AYPQA+VRIIGFDNVRQVQCISFIA+ PE Y Sbjct: 132 FGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQVQCISFIAYKPEGY 180
BLAST of CD860270 vs. TAIR peptide
Match: AT5G61140.2 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2157) HSP 1 Score: 122.479 bits (306), Expect = 1.208e-28 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 + IRLEK S+R+SSRA PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+ L+T M+LP + QD K+ LVSDCY+GFEQEHSI+ Sbjct: 2064 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2151
BLAST of CD860270 vs. TAIR peptide
Match: AT5G61140.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr5:24589999-24603311 FORWARD LENGTH=2146) HSP 1 Score: 122.479 bits (306), Expect = 1.208e-28 Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = -3 Query: 225 INIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPRTQANLQDIKVFLVSDCYIGFEQEHSIK 491 + IRLEK S+R+SSRA PRFPK+K+E WWLVLG+TSTSEL+A+KRVSF+ L+T M+LP + QD K+ LVSDCY+GFEQEHSI+ Sbjct: 2053 LEIRLEK-TSKRNSSRALAPRFPKVKDEAWWLVLGDTSTSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIE 2140
BLAST of CD860270 vs. TAIR peptide
Match: AT1G67090.1 (| Symbols: RBCS1A | ribulose bisphosphate carboxylase small chain 1A | chr1:25048465-25049249 REVERSE LENGTH=180) HSP 1 Score: 69.707 bits (169), Expect = 9.421e-13 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 130 FGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.3 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=186) HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 135 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 183
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.2 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=174) HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 123 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 171
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38410.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15377501-15378306 REVERSE LENGTH=181) HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38420.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15381203-15381978 REVERSE LENGTH=181) HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. TAIR peptide
Match: AT5G38430.1 (| Symbols: | Ribulose bisphosphate carboxylase (small chain) family protein | chr5:15384350-15385155 REVERSE LENGTH=181) HSP 1 Score: 68.9366 bits (167), Expect = 1.607e-12 Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = -1 Query: 38 FCTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQVQCISFIAHTPESY 184 F TD++QVLKE++E YP AF+RIIGFDN RQVQCISFIA+ P S+ Sbjct: 130 FGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSF 178
BLAST of CD860270 vs. TAIR peptide
Match: AT2G42270.1 (| Symbols: | U5 small nuclear ribonucleoprotein helicase | chr2:17604330-17610848 FORWARD LENGTH=2172) HSP 1 Score: 56.9954 bits (136), Expect = 6.233e-9 Identity = 28/89 (31.46%), Postives = 48/89 (53.93%), Query Frame = -3 Query: 231 INIRLEK-LNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLP-RTQANLQDIKVFLVSDCYIGFEQEHS 491 + + LE+ + R PR+PK KEE WWLV+G T++L A+KR+S ++ T+ + ++ + D Y+G +QE+S Sbjct: 2068 LQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKLEFAVPTETGEKSYTLYFMCDSYLGCDQEYS 2156
BLAST of CD860270 vs. TAIR peptide
Match: AT1G20960.2 (| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171) HSP 1 Score: 55.0694 bits (131), Expect = 2.368e-8 Identity = 25/68 (36.76%), Postives = 42/68 (61.76%), Query Frame = -3 Query: 231 RFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPR-TQANLQDIKVFLVSDCYIGFEQEHS 431 R+PK KEE WWLV+G+T T++L A+KRVS + + ++ + ++ + D Y+G +QE+S Sbjct: 2088 RYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYS 2155 The following BLAST results are available for this feature:
BLAST of CD860270 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of CD860270 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 10
BLAST of CD860270 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD860270 ID=CD860270; Name=CD860270; organism=Pisum sativum; type=EST; length=499bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|