FG532693

EST Overview
NameFG532693
Unique NameFG532693
TypeEST
OrganismPisum sativum (pea)
Sequence length542
Libraries
Library NameType
LIBEST_023217 MeriP Pisum sativum Shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide2011-02-03
InterProScan analysis for Pisum sativum unigene v12010-12-29
Homology
BLAST of FG532693 vs. TrEMBL
Match: B9S003_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1003620 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.809e-24
Identity = 66/143 (46.15%), Postives = 90/143 (62.94%), Query Frame = 1
Query:    4 RKNRLSQKKLNDIMYVHYNLRLRECQVRK-RSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPF---GVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDD-----ESDLNYFDDDLSE 405
            R+NR +QKKL+D+++VHYNLRLRECQ++K R  +  S S+D +L E L +DWIV+    S   D+ I +   G   +   E+D IDY+D      KGSLEL+TMAD  V   D + AN  G T+D     E D N+FDD+LS+
Sbjct:  766 RQNRFAQKKLDDLVFVHYNLRLRECQLKKRRGIDGSSMSLDGLLPERLLNDWIVEAEKHSFQEDEEIHYSENGGTYEGRCEDDLIDYDDAILEPQKGSLELVTMAD--VEQLDVNPANGGGTTEDDDDEEEDDHNFFDDNLSD 906          
BLAST of FG532693 vs. TrEMBL
Match: D7T690_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017686001 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.669e-24
Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1
Query:   10 NRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELD--DEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSD-ADHANIDGATDDESDLNYFDDDLSE 405
            NRL+QK+LND++YVHYNLRLRE Q+ KRS +    S+DS+L E L  DWIV+    +   D+ IP+  E+D  D YEND ++YEDG A   K SLE++T++  +V   D  + A+   ATDD++DLN+  DDLS+
Sbjct:  777 NRLAQKRLNDLIYVHYNLRLRERQLSKRSND--VMSLDSILLESLLDDWIVEAENPTVQEDEEIPYN-EMDHTDAYENDLMEYEDGTADGRKASLEMVTLS--SVEPLDIVNPASAGVATDDDTDLNFLGDDLSD 906          
BLAST of FG532693 vs. TrEMBL
Match: B9GSZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644917 PE=4 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.497e-9
Identity = 40/134 (29.85%), Postives = 76/134 (56.72%), Query Frame = 1
Query:    4 RKNRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDDESDLNYFDDDLSE 405
            R +  S+K+ N++ +VHYNLRLRE Q+ ++  +    S D+++ E++  DW+V++  Q+   D+ I +     ++++ D +D  D      K   +++T+A G +   D   A   G T D+  L++ DDDL++
Sbjct:   99 RHSTASRKRWNELTFVHYNLRLRERQLGRKPGD--VVSFDNLITENILDDWLVESEKQTMQEDEEILYNEM--EQFDGDEMDEND---HQEKRPADMVTLA-GVLEPLDVIPA-AGGVTTDDDGLDFLDDDLTD 223          
BLAST of FG532693 vs. TAIR peptide
Match: AT3G17450.1 (| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877)

HSP 1 Score: 51.2174 bits (121), Expect = 4.072e-7
Identity = 36/135 (26.67%), Postives = 62/135 (45.93%), Query Frame = 1
Query:    7 KNRLSQKKLNDIMYVHYNLRLRECQVRKR--SRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDDESDLNYFDDDLSE 405
            +++  +K   D+ YVHYNLRLRE Q+++R    +    +++  L + L  DW+V +  +  +          L  E   +  D+ED      K  +E                 N+DG  + E +L+ +DDDLS+
Sbjct:  767 QSQFGKKSTKDLTYVHYNLRLREKQLKQRLHYEDEPPPTLNHALLDRLLPDWLVTSEKEEEEA---------LHGEDRAEKEDHEDDEEEEEKFYME---------------SGNVDG--EGEDNLDPYDDDLSD 875          
The following BLAST results are available for this feature:
BLAST of FG532693 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 3
Match NameE-valueIdentityDescription
B9S003_RICCO2.809e-2446.15DNA binding protein, putative OS=Ricinus communis ... [more]
D7T690_VITVI3.669e-2448.89Whole genome shotgun sequence of line PN40024, sca... [more]
B9GSZ8_POPTR1.497e-929.85Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of FG532693 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G17450.14.072e-726.67| Symbols: | hAT dimerisation domain-containing p... [more]
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InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 11..23
score
NoneNo IPR availableSEGsegsegcoord: 1..12
score

Properties
Property NameValue
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>FG532693 ID=FG532693; Name=FG532693; organism=Pisum sativum; type=EST; length=542bp
AACAGAAAAAACCGTCTATCTCAGAAGAAACTTAACGACATTATGTACGT
TCACTATAACTTGCGCCTTAGAGAATGCCAAGTAAGGAAAAGGTCCAGGG
AGTCAAAGTCAACCTCTGTTGACAGTGTTCTACAAGAGCATTTATTTAGT
GACTGGATAGTTGATACCACTGCACAAAGCTCTGATGGTGACAAGAATAT
CCCTTTTGGAGTTGAACTAGACGATGAATATGAAAATGATTCAATTGATT
ATGAAGATGGAGCTGCAAGGCATCTAAAGGGTTCCCTTGAGCTGATGACT
ATGGCTGACGGAGCAGTAGGATCATCAGATGCAGATCATGCTAACATCGA
CGGCGCCACTGACGATGAGTCGGATCTGAATTATTTTGACGATGATCTAA
GCGAGTAATCAAGTCACATGGTTCTTCTTGTAAAGGTATAAGCAAATTGG
TTGCTAGTTATGAACATATATTGCTACTTCCCTGTGAAAAATCAAGATCT
TGTTGTATGCAACCATGTTCCTTTTTATCTATGAGAGCATTG
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