FG532693
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG532693 vs. TrEMBL
Match: B9S003_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1003620 PE=4 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.809e-24 Identity = 66/143 (46.15%), Postives = 90/143 (62.94%), Query Frame = 1 Query: 4 RKNRLSQKKLNDIMYVHYNLRLRECQVRK-RSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPF---GVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDD-----ESDLNYFDDDLSE 405 R+NR +QKKL+D+++VHYNLRLRECQ++K R + S S+D +L E L +DWIV+ S D+ I + G + E+D IDY+D KGSLEL+TMAD V D + AN G T+D E D N+FDD+LS+ Sbjct: 766 RQNRFAQKKLDDLVFVHYNLRLRECQLKKRRGIDGSSMSLDGLLPERLLNDWIVEAEKHSFQEDEEIHYSENGGTYEGRCEDDLIDYDDAILEPQKGSLELVTMAD--VEQLDVNPANGGGTTEDDDDEEEDDHNFFDDNLSD 906
BLAST of FG532693 vs. TrEMBL
Match: D7T690_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_20.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00017686001 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 3.669e-24 Identity = 66/135 (48.89%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 10 NRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELD--DEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSD-ADHANIDGATDDESDLNYFDDDLSE 405 NRL+QK+LND++YVHYNLRLRE Q+ KRS + S+DS+L E L DWIV+ + D+ IP+ E+D D YEND ++YEDG A K SLE++T++ +V D + A+ ATDD++DLN+ DDLS+ Sbjct: 777 NRLAQKRLNDLIYVHYNLRLRERQLSKRSND--VMSLDSILLESLLDDWIVEAENPTVQEDEEIPYN-EMDHTDAYENDLMEYEDGTADGRKASLEMVTLS--SVEPLDIVNPASAGVATDDDTDLNFLGDDLSD 906
BLAST of FG532693 vs. TrEMBL
Match: B9GSZ8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_644917 PE=4 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.497e-9 Identity = 40/134 (29.85%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 4 RKNRLSQKKLNDIMYVHYNLRLRECQVRKRSRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDDESDLNYFDDDLSE 405 R + S+K+ N++ +VHYNLRLRE Q+ ++ + S D+++ E++ DW+V++ Q+ D+ I + ++++ D +D D K +++T+A G + D A G T D+ L++ DDDL++ Sbjct: 99 RHSTASRKRWNELTFVHYNLRLRERQLGRKPGD--VVSFDNLITENILDDWLVESEKQTMQEDEEILYNEM--EQFDGDEMDEND---HQEKRPADMVTLA-GVLEPLDVIPA-AGGVTTDDDGLDFLDDDLTD 223
BLAST of FG532693 vs. TAIR peptide
Match: AT3G17450.1 (| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877) HSP 1 Score: 51.2174 bits (121), Expect = 4.072e-7 Identity = 36/135 (26.67%), Postives = 62/135 (45.93%), Query Frame = 1 Query: 7 KNRLSQKKLNDIMYVHYNLRLRECQVRKR--SRESKSTSVDSVLQEHLFSDWIVDTTAQSSDGDKNIPFGVELDDEYENDSIDYEDGAARHLKGSLELMTMADGAVGSSDADHANIDGATDDESDLNYFDDDLSE 405 +++ +K D+ YVHYNLRLRE Q+++R + +++ L + L DW+V + + + L E + D+ED K +E N+DG + E +L+ +DDDLS+ Sbjct: 767 QSQFGKKSTKDLTYVHYNLRLREKQLKQRLHYEDEPPPTLNHALLDRLLPDWLVTSEKEEEEA---------LHGEDRAEKEDHEDDEEEEEKFYME---------------SGNVDG--EGEDNLDPYDDDLSD 875 The following BLAST results are available for this feature:
BLAST of FG532693 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 3
BLAST of FG532693 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG532693 ID=FG532693; Name=FG532693; organism=Pisum sativum; type=EST; length=542bpback to top |