AM162066

EST Overview
NameAM162066
Unique NameAM162066
TypeEST
OrganismPisum sativum (pea)
Sequence length360
Libraries
Library NameType
LIBEST_019360 Pisum sativum leaf vegetativecdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides2011-04-21
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of AM162066 vs. Lotus protein
Match: chr1.CM0269.1260.r2.a (- phase: 0 )

HSP 1 Score: 53.5286 bits (127), Expect = 2.041e-8
Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 
Query:  240 VLLPSSDLRLSFIGDDGKTERSFTLSSRSQ 329
            VLLPSSDLRLSFIGDDGKTER FTL+S+ Q
Sbjct:  160 VLLPSSDLRLSFIGDDGKTERLFTLTSKLQ 189
[Close]
BLAST of AM162066 vs. Soybean peptides
Match: Glyma14g06730.1|PACid:16294614 ()

HSP 1 Score: 54.299 bits (129), Expect = 2.865e-8
Identity = 27/38 (71.05%), Postives = 32/38 (84.21%), Query Frame = 3 
Query:  216 SERPHRAGVLLPSSDLRLSFIGDDGKTERSFTLSSRSQ 329
            S R +   VLLPSSDLRLSFIGDDG+TER FTL+++SQ
Sbjct:  154 SNRGNLTLVLLPSSDLRLSFIGDDGRTERLFTLTNKSQ 191
[Close]
BLAST of AM162066 vs. Soybean peptides
Match: Glyma02g42160.1|PACid:16249878 ()

HSP 1 Score: 53.5286 bits (127), Expect = 4.887e-8
Identity = 25/30 (83.33%), Postives = 29/30 (96.67%), Query Frame = 3 
Query:  240 VLLPSSDLRLSFIGDDGKTERSFTLSSRSQ 329
            VLLPSSDLRLSFIGDDG+TER FTL+++SQ
Sbjct:  162 VLLPSSDLRLSFIGDDGRTERLFTLTNKSQ 191
[Close]
BLAST of AM162066 vs. Medicago proteins
Match: IMGA|Medtr5g081880.1 (Unknown Protein (AHRD V1) chr05_pseudomolecule_IMGAG_V3.5 34109116-34101369 E EGN_Mt100125 20100825)

HSP 1 Score: 56.9954 bits (136), Expect = 2.721e-9
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 3 
Query:  240 VLLPSSDLRLSFIGDDGKTERSFTLSSRSQMHLLLWLEGI 359
            VLLPSSDLRLSFIGDDGKTER FTLSS SQ   ++ +EGI
Sbjct:  176 VLLPSSDLRLSFIGDDGKTERLFTLSSTSQCSAVV-VEGI 214
The following BLAST results are available for this feature:
BLAST of AM162066 vs. Lotus protein
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Lotus proteins)
Total hits: 1
Match NameE-valueIdentityDescription
chr1.CM0269.1260.r2.a2.041e-886.67- phase: 0 [more]
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BLAST of AM162066 vs. Soybean peptides
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Soybean peptides)
Total hits: 2
Match NameE-valueIdentityDescription
Glyma14g06730.1|PACid:162946142.865e-871.05[more]
Glyma02g42160.1|PACid:162498784.887e-883.33[more]
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BLAST of AM162066 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr5g081880.12.721e-977.50Unknown Protein (AHRD V1) chr05_pseudomolecule_IMG... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>AM162066 ID=AM162066; Name=AM162066; organism=Pisum sativum; type=EST; length=360bp
CTGTGGACGTGATTGAGAGGAGACATTGTATCAAATAGAGCTGTAAAGCT
TTGGCTTGCTTTGAAGGGAAGAGACAAAGTGAGTTGTCAGAGGATATTTA
GCTCACTNGTCATCCCTAAACTGCTTCGAGACACCGTCTTAGAAACGGAT
CCTTTGGAGATCGATAGACTCGGGTTTACTACAGATACACCGAGAAATTT
TACGAAATATTCAAGTCAGAGCGGCCGCACCGGGCAGGTGTTCTACTTCC
AAGCTCTGATCTTCGTCTCTCATTCATTGGGGATGATGGTAAAACAGAGA
GATCATTCACTCTTTCTAGCAGATCCCAAATGCATCTGCTGTTGTGGTTA
GAGGGAATCC
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