CD858720
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CD858720 vs. TrEMBL
Match: B7FGX3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.506e-10 Identity = 34/51 (66.67%), Postives = 34/51 (66.67%), Query Frame = -1 Query: 358 SSWVVVXXXXXXXXXXXXXXXXXGCVRANFGNNPAVRVEGFDCLDRDSRNC 510 SSWVVV GCVRANFGNNPAVRVEGFDCLDRDSRNC Sbjct: 104 SSWVVVPAPSGLPPSPPSSARKGGCVRANFGNNPAVRVEGFDCLDRDSRNC 154
BLAST of CD858720 vs. TrEMBL
Match: C6T416_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.375e-8 Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = -1 Query: 355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438 CVRANFGNNPAVR+EGFDCLDRD RNCS Sbjct: 143 CVRANFGNNPAVRIEGFDCLDRDRRNCS 170
BLAST of CD858720 vs. TrEMBL
Match: D7T944_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011892001 PE=4 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 1.796e-8 Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = -1 Query: 355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438 C+RANFGNNPAVR+EGFDCLDRD RNCS Sbjct: 142 CIRANFGNNPAVRIEGFDCLDRDRRNCS 169
BLAST of CD858720 vs. TrEMBL
Match: B9T053_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.986e-7 Identity = 25/28 (89.29%), Postives = 26/28 (92.86%), Query Frame = -1 Query: 355 CVRANFGNNPAVRVEGFDCLDRDSRNCS 438 CVRANFGN PAVRVEGFDCLDRD R+CS Sbjct: 157 CVRANFGNKPAVRVEGFDCLDRDRRSCS 184
BLAST of CD858720 vs. TAIR peptide
Match: AT1G68490.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25693926-25694946 FORWARD LENGTH=183) HSP 1 Score: 56.225 bits (134), Expect = 1.137e-8 Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = -1 Query: 355 VRANFGNNPAVRVEGFDCLDRDSRNCS 435 VR NFGN+P VRVEGFDCLDRDSRNCS Sbjct: 152 VRGNFGNSPKVRVEGFDCLDRDSRNCS 178 The following BLAST results are available for this feature:
BLAST of CD858720 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 4
BLAST of CD858720 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CD858720 ID=CD858720; Name=CD858720; organism=Pisum sativum; type=EST; length=510bpback to top |