EX568902

EST Overview
NameEX568902
Unique NameEX568902
TypeEST
OrganismPisum sativum (pea)
Sequence length437
Libraries
Library NameType
LIBEST_021973 Pisum sativum shoot apical meristem ESTscdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Pisum sativum unigene v2Pisum sativum unigene v2EST
Pisum sativum unigene v1Pisum sativum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Pisum sativum unigene v12010-12-27
Homology Analysis: Pisum sativum unigene v1 vs Trembl2010-12-28
Pisum sativum unigene v22011-03-01
Homology Analysis: Pisum sativum unigene v2 vs Trembl2011-04-27
Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins2011-04-21
Homology
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BLAST of EX568902 vs. TrEMBL
Match: Q84RS1_MEDSA (ZIK1 protein OS=Medicago sativa GN=zik1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 2.449e-7
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 1 
Query:    1 QVAVSDFLNEFSPEISLQLLNICNLQMPDSEV 96
            ++AVSDFLNEFSPEISLQ+LN+CNLQMPD E+
Sbjct:  560 KLAVSDFLNEFSPEISLQVLNMCNLQMPDGEM 591
[Close]
BLAST of EX568902 vs. TrEMBL
Match: Q84RS1_MEDSA (ZIK1 protein OS=Medicago sativa GN=zik1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.063e-7
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 1 
Query:    1 QVAVSDFLNEFSPEISLQLLNICNLQMPDSEV 96
            ++AVSDFLNEFSPEISLQ+LN+CNLQMPD E+
Sbjct:  560 KLAVSDFLNEFSPEISLQVLNMCNLQMPDGEM 591
[Close]
BLAST of EX568902 vs. Medicago proteins
Match: IMGA|Medtr3g076650.1 (Serine/threonine-protein kinase WNK2 (AHRD V1 ***- Q8S8Y9); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase chr03_pseudomolecule_IMGAG_V3.5 24217164-24222691 E EGN_Mt100125 20100825)

HSP 1 Score: 58.5362 bits (140), Expect = 1.428e-9
Identity = 26/32 (81.25%), Postives = 31/32 (96.88%), Query Frame = 1 
Query:    1 QVAVSDFLNEFSPEISLQLLNICNLQMPDSEV 96
            ++AVSDFLNEFSPEISLQ+LN+CNLQMPD E+
Sbjct:  560 KLAVSDFLNEFSPEISLQVLNMCNLQMPDGEM 591
The following BLAST results are available for this feature:
BLAST of EX568902 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q84RS1_MEDSA2.449e-781.25ZIK1 protein OS=Medicago sativa GN=zik1 PE=2 SV=1[more]
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BLAST of EX568902 vs. TrEMBL
Analysis Date: 2011-04-27 (Homology Analysis: Pisum sativum unigene v2 vs Trembl)
Total hits: 1
Match NameE-valueIdentityDescription
Q84RS1_MEDSA3.063e-781.25ZIK1 protein OS=Medicago sativa GN=zik1 PE=2 SV=1[more]
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BLAST of EX568902 vs. Medicago proteins
Analysis Date: 2011-04-21 (Homology Analysis: Pisum sativum unigene v2 vs Medicago proteins)
Total hits: 1
Match NameE-valueIdentityDescription
IMGA|Medtr3g076650.11.428e-981.25Serine/threonine-protein kinase WNK2 (AHRD V1 ***-... [more]
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Properties
Property NameValue
Singlet in analysisPisum sativum unigene v2
Singlet in analysisPisum sativum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>EX568902 ID=EX568902; Name=EX568902; organism=Pisum sativum; type=EST; length=437bp
CAAGTAGCTGTCTCAGATTTTTTGAATGAATTTTCTCCAGAAATTTCCCT
ACAGCTTCTAAATATATGCAACCTGCAGATGCCTGACTCTGAAGTGTAAA
TCTTTCATGCAGTTACTTGGAACAAATTGCACAGAGTTAATATTTTGGGT
TCGGGGAGTCATAACTTTTGATCATCTTTGCAAGATGATTTTGGTTGAGT
GAAGACTTAATCTCATCTTTAGCATGAAGACTAAATGCTATTGCTGTATT
TAAGGGTAGTGAAATGATAGGGCGTCGTAAGACTAGATTATTTCAATTTC
ATTCCCCAATATAATAACATCTGTACATAGTTTGGTACAAGTTATTAAAC
TATAGAAAGTGTATACTTGTACATATTCTTGCTTTCACTAGGAGTTTACC
GTTGGTTGGTAGCAGTTAAATGCTGAGCATGGTATCA
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