FG531501
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FG531501 vs. TrEMBL
Match: B7FM14_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.347e-66 Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARL AQFSQVRPV MAPIAPR+PFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFF+PM QQGQQGQR Sbjct: 344 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLPAQFSQVRPVTMAPIAPRLPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFMPMVQQGQQGQR 472
BLAST of FG531501 vs. TrEMBL
Match: B9GNU4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_816470 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.686e-56 Identity = 107/130 (82.31%), Postives = 117/130 (90.00%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RALAE+NGKMV KPLYVAPAQ+KEER+ARLQAQFSQ+RPVAMAP +APR+ YP G PG+GQQ +YGQ PPA I QAGFGY QQLVPGMRPGGAPMPNFFVP+ QQGQQGQR Sbjct: 350 ISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQRKEERRARLQAQFSQMRPVAMAPSVAPRMQMYPPGAPGLGQQFLYGQGPPAMIPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQR 479
BLAST of FG531501 vs. TrEMBL
Match: B9RYE9_RICCO (Polyadenylate-binding protein, putative OS=Ricinus communis GN=RCOM_0812530 PE=4 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 2.691e-54 Identity = 107/131 (81.68%), Postives = 116/131 (88.55%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA++AL EMNGKMV KPLYVA AQ+KE+R+ARLQAQFSQ+RPVAMAP +APR+P YP G PG+GQQI YGQAPPA I Q GFGY QQLVPGMRPGGAPMPNFFVPM QQGQQGQR Sbjct: 344 ISRGSGFVAFSTPEEASKALMEMNGKMVVSKPLYVALAQRKEDRRARLQAQFSQIRPVAMAPSVAPRMPMYPPGGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 474
BLAST of FG531501 vs. TrEMBL
Match: Q1EMR9_PLAMJ (PolyA-binding protein (Fragment) OS=Plantago major GN=pabp1 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 7.831e-54 Identity = 106/131 (80.92%), Postives = 115/131 (87.79%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEE+ RAL+EMNGKMV KPLYVA AQ+KEER+ARLQAQFSQ+RPVAM P IAPR+P YP G PG+GQQ+ YGQ PPA I SQAGFGY QQLVPGMRPGG PMPNFF+PM QQGQQGQR Sbjct: 14 ISRGSGFVAFSTPEESARALSEMNGKMVISKPLYVALAQRKEERRARLQAQFSQMRPVAMPPSIAPRMPMYPPGAPGIGQQLFYGQGPPAMIPSQAGFGYQQQLVPGMRPGGTPMPNFFMPMVQQGQQGQR 144
BLAST of FG531501 vs. TrEMBL
Match: A5B5N0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_017035 PE=4 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.745e-53 Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFST EEA+RAL EMNGKMV KPLYVA AQ+KEER+ARLQAQFSQ+RPV+MAP +APR+P YP G PG+GQQ+ YGQ PPA I QAGFGY QQLVPGMRPGGAPMPNFFVP+ QQGQQGQR Sbjct: 338 ISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQR 468
BLAST of FG531501 vs. TrEMBL
Match: B9MVU0_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_287102 PE=4 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 2.278e-53 Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RALAEMNGKM+ KPLYVA AQ+KEER+ARLQAQFSQ+RPV MAP +A R+P YP G PGMGQQ +YGQ PPA + QAGFGY QQLVPGMRPGGAPMPNFFVP+ QQGQQGQR Sbjct: 332 ISRGSGFVAFSTPEEASRALAEMNGKMLISKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVASRMPMYPPGAPGMGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGAPMPNFFVPLVQQGQQGQR 462
BLAST of FG531501 vs. TrEMBL
Match: B9R792_RICCO (Polyadenylate-binding protein, putative OS=Ricinus communis GN=RCOM_1589620 PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.886e-53 Identity = 105/131 (80.15%), Postives = 113/131 (86.26%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RALAEMNGKMV KPLYVA AQ+KEER+ARLQAQFSQ+RPVAMAP + PR+P Y G PGMGQQ +YGQ PP I Q GFGY QQLVPG+RPGGAPMPNFFVPM QQGQQGQR Sbjct: 356 ISRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSVGPRMPIYSPGAPGMGQQFLYGQGPPTMIPPQGGFGYQQQLVPGIRPGGAPMPNFFVPMVQQGQQGQR 486
BLAST of FG531501 vs. TrEMBL
Match: Q9AT32_DAUCA (Poly(A)-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 5.076e-53 Identity = 104/131 (79.39%), Postives = 114/131 (87.02%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFIS-QAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RAL EMNGKM+ KPLYVA AQ+KEER+ARLQAQFSQ+RPVAM P + PR+P Y G PGMGQQ+ YGQAPPA I+ QAGFGY QQLVPGMRPGG PMPNFF+PM QQGQQGQR Sbjct: 360 ISRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMPPSMGPRMPMYSPGAPGMGQQLFYGQAPPAMIAPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQGQR 490
BLAST of FG531501 vs. TrEMBL
Match: B9GHB4_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_815675 PE=4 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 8.658e-53 Identity = 105/131 (80.15%), Postives = 114/131 (87.02%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RAL EMNGK+V KPLYVA AQ+KE+R+ARLQAQFSQ+RPVAMAP + PR+P YP PG+GQQI YGQAPPA I Q GFGY QQLVPGMRPGGAPMPNFFVPM QQGQQGQR Sbjct: 345 ISRGSGFVAFSTPEEASRALLEMNGKIVVSKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVGPRMPMYPPAGPGLGQQIFYGQAPPAIIPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 475
BLAST of FG531501 vs. TrEMBL
Match: A9PEX9_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.929e-52 Identity = 104/130 (80.00%), Postives = 112/130 (86.15%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 ISRGSGFVAFSTPEEA+RAL EMNGKMVA KPLYVA AQ+KE+R+ARLQAQFSQ+RPVAMAP R+P YP PG+GQQI YGQ PPA + Q GFGY QQLVPGMRPGGAPMPNFFVPM QQGQQGQR Sbjct: 110 ISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMRPVAMAPSVGRMPMYPPTGPGLGQQIFYGQGPPAIMPPQPGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQR 239
BLAST of FG531501 vs. SwissProt
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.617e-45 Identity = 87/127 (68.50%), Postives = 106/127 (83.46%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQ 379 S+GSGFVAF+TPEEAT A+++++GKM+ KPLYVA AQ+KE+R+ RLQAQFSQVRPVAM P + PR+P YP G PG+GQQ+ YGQAPPA I Q G+GY QQLVPGMRPGG P+P+FF+PM Q QQ Sbjct: 357 SKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQ 483
BLAST of FG531501 vs. SwissProt
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.579e-24 Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFY--PAG-VPGMGQQIMYGQAPPAFI--SQAGFGYPQQLVPGMRPGGAPMPNFFV--PMGQQGQQGQR 388 +SRG GFVA+S PEEA RAL+EMNGKM+ KPLY+A AQ+KE+R+A LQA FSQ+R AP P F+ P G +PG Q + GQ + + G+G+ Q +PGMRPG P NF V P+ +Q Q G R Sbjct: 370 MSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR----AP-GPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQTGPR 499
BLAST of FG531501 vs. SwissProt
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.332e-23 Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR-PVAMAPI-APRVPF--YPAGVPGMGQQIMYGQAPPAFISQ----------AGFGYPQQLVPGMRPGGAPMPNFFV--PMGQQGQQGQR 388 +SRG GFVA+S PEEA A+ EMNGKM+ KPLYVA AQ+KEER+A LQ+ F+Q+R P M+P+ +P F +P G P M G P FI G+GY Q +PGMRPG P PNF + P+ +Q Q G R Sbjct: 366 LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGP------MSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPR 503
BLAST of FG531501 vs. SwissProt
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 55/127 (43.31%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAG--FGYPQQLVPGMRPGGAPMPNFFVPMGQQGQ 376 +SRG GFV +S PEEA +A++EMNGKM+ +PLYVA AQ+K+ R+ +L+AQ Q + + A G PG G MY P AF Q G P+ GM P G PM P GQ GQ Sbjct: 368 VSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQLEAQIMQRNQLRLQQQAAA---QGMGYPGPG---MYYPQPGAFPGQPGGMVPRPRYAPAGMMPQGMPM----APYGQPGQ 484
BLAST of FG531501 vs. SwissProt
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 52/119 (43.70%), Postives = 69/119 (57.98%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMG---QQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNF 349 +SRG GFV +S+P+EAT+A++EMNGKM+ KPLYVA AQ+K+ R+ L++Q +Q M Y AG PGM Q MYG P G+G P +PGM P PM + Sbjct: 368 VSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQQRMQ--------YGAGFPGMQGYMGQPMYGYPP-----MPGYGQP---MPGMPPVRGPMMGY 470
BLAST of FG531501 vs. SwissProt
Match: PABPA_XENLA (Polyadenylate-binding protein 1-A OS=Xenopus laevis GN=pabpc1-a PE=1 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 3.514e-16 Identity = 57/149 (38.26%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ-----------VRP----------VAMAPIAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 S+G GFV FS+PEEAT+A+ EMNG++VA KPLYVA AQ+KEER+A L Q+ Q + P A+ P R +YP G QI + P + +Q +P Q +PG AP P F M Q R Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRVPNPVINPYQPPPSSYFMAAIPPAQNRAAYYPPG------QIAQLRPSPRWTAQGARPHPFQNMPGAIRPTAPRPPTFSTMRPASNQVPR 474 HSP 2 Score: 55.4546 bits (132), Expect = 1.025e-7 Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 169 S+G GFV+F E+A +A+ EMNGK + GK ++V AQKK ER+ L+ +F Q++ Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMK 284
BLAST of FG531501 vs. SwissProt
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus GN=Pabpc1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.589e-16 Identity = 56/132 (42.42%), Postives = 72/132 (54.55%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ----VRPVAMAPIAPRVPFYPAG-----VPGM--------GQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNF 349 S+G GFV FS+PEEAT+A+ EMNG++VA KPLYVA AQ+KEER+A L Q+ Q VR V I P P P+G +P QI + P + +Q +P Q +PG AP P F Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPF 463 HSP 2 Score: 57.3806 bits (137), Expect = 2.697e-8 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 169 S+G GFV+F E+A +A+ EMNGK + GK +YV AQKK ER+ L+ +F Q++ Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of FG531501 vs. SwissProt
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii GN=PABPC1 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.589e-16 Identity = 56/132 (42.42%), Postives = 72/132 (54.55%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ----VRPVAMAPIAPRVPFYPAG-----VPGM--------GQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNF 349 S+G GFV FS+PEEAT+A+ EMNG++VA KPLYVA AQ+KEER+A L Q+ Q VR V I P P P+G +P QI + P + +Q +P Q +PG AP P F Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPF 463 HSP 2 Score: 57.3806 bits (137), Expect = 2.697e-8 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 169 S+G GFV+F E+A +A+ EMNGK + GK +YV AQKK ER+ L+ +F Q++ Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of FG531501 vs. SwissProt
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.589e-16 Identity = 56/132 (42.42%), Postives = 72/132 (54.55%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ----VRPVAMAPIAPRVPFYPAG-----VPGM--------GQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNF 349 S+G GFV FS+PEEAT+A+ EMNG++VA KPLYVA AQ+KEER+A L Q+ Q VR V I P P P+G +P QI + P + +Q +P Q +PG AP P F Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPF 463 HSP 2 Score: 57.3806 bits (137), Expect = 2.697e-8 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 169 S+G GFV+F E+A +A+ EMNGK + GK +YV AQKK ER+ L+ +F Q++ Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of FG531501 vs. SwissProt
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens GN=PABPC1 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.589e-16 Identity = 56/132 (42.42%), Postives = 72/132 (54.55%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ----VRPVAMAPIAPRVPFYPAG-----VPGM--------GQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNF 349 S+G GFV FS+PEEAT+A+ EMNG++VA KPLYVA AQ+KEER+A L Q+ Q VR V I P P P+G +P QI + P + +Q +P Q +PG AP P F Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPF 463 HSP 2 Score: 57.3806 bits (137), Expect = 2.697e-8 Identity = 27/55 (49.09%), Postives = 39/55 (70.91%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 169 S+G GFV+F E+A +A+ EMNGK + GK +YV AQKK ER+ L+ +F Q++ Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of FG531501 vs. TAIR peptide
Match: AT1G49760.2 (| Symbols: PAB8 | poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671) HSP 1 Score: 200.29 bits (508), Expect = 2.564e-52 Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 +SRGSGFVAFSTPEEATRA+ EMNGKM+ KPLYVA AQ+KE+RKARLQAQFSQ+RPV M P + PR+ YP G P MGQQ+ YGQ PPA I Q GFGY QQLVPGMRPGG+PMPNFF+PM QQGQQ Q+ Sbjct: 365 VSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQ 494
BLAST of FG531501 vs. TAIR peptide
Match: AT1G49760.1 (| Symbols: PAB8, PABP8 | poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671) HSP 1 Score: 200.29 bits (508), Expect = 2.564e-52 Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFISQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 +SRGSGFVAFSTPEEATRA+ EMNGKM+ KPLYVA AQ+KE+RKARLQAQFSQ+RPV M P + PR+ YP G P MGQQ+ YGQ PPA I Q GFGY QQLVPGMRPGG+PMPNFF+PM QQGQQ Q+ Sbjct: 365 VSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQ 494
BLAST of FG531501 vs. TAIR peptide
Match: AT4G34110.1 (| Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629) HSP 1 Score: 181.03 bits (458), Expect = 1.610e-46 Identity = 87/127 (68.50%), Postives = 106/127 (83.46%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAP-IAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQ 379 S+GSGFVAF+TPEEAT A+++++GKM+ KPLYVA AQ+KE+R+ RLQAQFSQVRPVAM P + PR+P YP G PG+GQQ+ YGQAPPA I Q G+GY QQLVPGMRPGG P+P+FF+PM Q QQ Sbjct: 357 SKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQ 483
BLAST of FG531501 vs. TAIR peptide
Match: AT2G23350.1 (| Symbols: PAB4, PABP4 | poly(A) binding protein 4 | chr2:9943209-9946041 FORWARD LENGTH=662) HSP 1 Score: 155.221 bits (391), Expect = 9.461e-39 Identity = 81/129 (62.79%), Postives = 92/129 (71.32%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGAPMPNFFVPMGQQGQQGQR 388 S+GSGFVAFS EA+R L EMNGKMV GKPLYVA AQ+KEER+A+LQAQFSQ+RP + + PR+P + G PG+GQQI YGQ PP I Q GFGY QLVPGMRP F PM Q GQQG R Sbjct: 367 SKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPA-----FFGGPMMQPGQQGPR 490 HSP 2 Score: 49.6766 bits (117), Expect = 5.598e-7 Identity = 25/53 (47.17%), Postives = 31/53 (58.49%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ 163 SR GFV F PE+A RA+ +NGK K YV AQKK ER+ L ++ Q Sbjct: 264 SRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQ 316
BLAST of FG531501 vs. TAIR peptide
Match: AT1G22760.1 (| Symbols: PAB3 | poly(A) binding protein 3 | chr1:8055599-8058799 FORWARD LENGTH=660) HSP 1 Score: 109.768 bits (273), Expect = 4.558e-25 Identity = 68/136 (50.00%), Postives = 87/136 (63.97%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFY--PAG-VPGMGQQIMYGQAPPAFI--SQAGFGYPQQLVPGMRPGGAPMPNFFV--PMGQQGQQGQR 388 +SRG GFVA+S PEEA RAL+EMNGKM+ KPLY+A AQ+KE+R+A LQA FSQ+R AP P F+ P G +PG Q + GQ + + G+G+ Q +PGMRPG P NF V P+ +Q Q G R Sbjct: 370 MSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR----AP-GPMSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQTGPR 499
BLAST of FG531501 vs. TAIR peptide
Match: AT1G71770.2 (| Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682) HSP 1 Score: 108.227 bits (269), Expect = 1.326e-24 Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR-PVAMAPI-APRVPF--YPAGVPGMGQQIMYGQAPPAFISQ----------AGFGYPQQLVPGMRPGGAPMPNFFV--PMGQQGQQGQR 388 +SRG GFVA+S PEEA A+ EMNGKM+ KPLYVA AQ+KEER+A LQ+ F+Q+R P M+P+ +P F +P G P M G P FI G+GY Q +PGMRPG P PNF + P+ +Q Q G R Sbjct: 380 LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGP------MSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPR 517
BLAST of FG531501 vs. TAIR peptide
Match: AT1G71770.1 (| Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682) HSP 1 Score: 108.227 bits (269), Expect = 1.326e-24 Identity = 69/145 (47.59%), Postives = 87/145 (60.00%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR-PVAMAPI-APRVPF--YPAGVPGMGQQIMYGQAPPAFISQ----------AGFGYPQQLVPGMRPGGAPMPNFFV--PMGQQGQQGQR 388 +SRG GFVA+S PEEA A+ EMNGKM+ KPLYVA AQ+KEER+A LQ+ F+Q+R P M+P+ +P F +P G P M G P FI G+GY Q +PGMRPG P PNF + P+ +Q Q G R Sbjct: 380 LSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGP------MSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPR 517
BLAST of FG531501 vs. TAIR peptide
Match: AT1G34140.1 (| Symbols: PAB1 | poly(A) binding protein 1 | chr1:12433356-12434735 REVERSE LENGTH=407) HSP 1 Score: 72.4034 bits (176), Expect = 8.065e-14 Identity = 50/129 (38.76%), Postives = 67/129 (51.94%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVRPVAMAPIAPRVPFYPAGVPGMGQQIMYGQ--APPAFISQ----AGFGY-PQQLVPGMRPGGAP---MPNFFVP 358 IS+G GFV FST EEA++A+ +MNGKMV KP+YV+ AQ KE+ K LQ QF+ P +P QQ ++ Q AP +SQ G+ + P + P P +PNF VP Sbjct: 261 ISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQFNN------PPPSPH------------QQPIFSQVVAPATMLSQQTPLRGYNFQPYSMCGSRMPNSCPPISIPNFMVP 371
BLAST of FG531501 vs. TAIR peptide
Match: AT2G36660.1 (| Symbols: PAB7 | poly(A) binding protein 7 | chr2:15361476-15364398 REVERSE LENGTH=609) HSP 1 Score: 68.1662 bits (165), Expect = 1.521e-12 Identity = 42/91 (46.15%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQF------------SQVRPVAMAPIAPRVPFYPAGVPGMGQQ 241 S+G GFV FSTPEEA A+ +G+M GKPLYVA AQKKE+RK +LQ QF + V P AP+ +Y PGM Q Sbjct: 343 SKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTYAPL-----YYTNTHPGMVYQ 428 HSP 2 Score: 48.9062 bits (115), Expect = 9.549e-7 Identity = 25/54 (46.30%), Postives = 31/54 (57.41%), Query Frame = 2 Query: 2 ISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQ 163 + RG FV F PE+A RA +NG K LYV AQKK ER+ L+ QF + Sbjct: 239 LCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKE 292
BLAST of FG531501 vs. TAIR peptide
Match: AT3G16380.1 (| Symbols: PAB6 | poly(A) binding protein 6 | chr3:5558676-5560993 REVERSE LENGTH=537) HSP 1 Score: 55.4546 bits (132), Expect = 1.020e-8 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 5 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQF-SQVRPVAMAPIAP 196 S+G GFV FS EE+ +A +NG +V GKP+ V A++KE+R RLQ F +Q R AP AP Sbjct: 343 SKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDRIKRLQQYFQAQPRQYTQAPSAP 407 The following BLAST results are available for this feature:
BLAST of FG531501 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of FG531501 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 10
BLAST of FG531501 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 10
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FG531501 ID=FG531501; Name=FG531501; organism=Pisum sativum; type=EST; length=388bpback to top |