AJ308142
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AJ308142 vs. TrEMBL
Match: Q9M5L1_EUPES (40S ribosomal protein S16 (Fragment) OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 116 TLLVADPRRCEPKKFGGRGARARFQKSYR 144
BLAST of AJ308142 vs. TrEMBL
Match: C6T5U0_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 129 TLLVADPRRCEPKKFGGRGARARFQKSYR 157
BLAST of AJ308142 vs. TrEMBL
Match: C5YR16_SORBI (Putative uncharacterized protein Sb08g001870 OS=Sorghum bicolor GN=Sb08g001870 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of AJ308142 vs. TrEMBL
Match: C5Y3N7_SORBI (Putative uncharacterized protein Sb05g001680 OS=Sorghum bicolor GN=Sb05g001680 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 120 TLLVADPRRCEPKKFGGRGARARFQKSYR 148
BLAST of AJ308142 vs. TrEMBL
Match: B9SPD6_RICCO (Ribosomal protein S9, putative OS=Ricinus communis GN=RCOM_0497330 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 124 TLLVADPRRCEPKKFGGRGARARFQKSYR 152
BLAST of AJ308142 vs. TrEMBL
Match: B9RYF4_RICCO (Ribosomal protein S9, putative OS=Ricinus communis GN=RCOM_0812680 PE=3 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 123 TLLVADPRRCEPKKFGGRGARARFQKSYR 151
BLAST of AJ308142 vs. TrEMBL
Match: B7FMP2_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 112 TLLVADPRRCEPKKFGGRGARARFQKSYR 140
BLAST of AJ308142 vs. TrEMBL
Match: B7FLC1_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 112 TLLVADPRRCEPKKFGGRGARARFQKSYR 140
BLAST of AJ308142 vs. TrEMBL
Match: B7FL97_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 115 TLLVADPRRCEPKKFGGRGARARFQKSYR 143
BLAST of AJ308142 vs. TrEMBL
Match: B7E333_ORYSJ (cDNA clone:001-019-B10, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 2.898e-8 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of AJ308142 vs. SwissProt
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.424e-9 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of AJ308142 vs. SwissProt
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.424e-9 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 121 TLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of AJ308142 vs. SwissProt
Match: RS16_LUPPO (40S ribosomal protein S16 OS=Lupinus polyphyllus GN=RPS16 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.424e-9 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 117 TLLVADPRRCEPKKFGGRGARARFQKSYR 145
BLAST of AJ308142 vs. SwissProt
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 1.424e-9 Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 117 TLLVADPRRCEPKKFGGRGARARFQKSYR 145
BLAST of AJ308142 vs. SwissProt
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.173e-9 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+RFQ SYR Sbjct: 114 TLLVADPRRCEPKKFGGRGARSRFQKSYR 142
BLAST of AJ308142 vs. SwissProt
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 3.173e-9 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+RFQ SYR Sbjct: 117 TLLVADPRRCEPKKFGGRGARSRFQKSYR 145
BLAST of AJ308142 vs. SwissProt
Match: RS16_DICDI (40S ribosomal protein S16 OS=Dictyostelium discoideum GN=rps16 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.144e-9 Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 +LLVADPRRCEPKKFGGRGARARFQ SYR Sbjct: 119 SLLVADPRRCEPKKFGGRGARARFQKSYR 147
BLAST of AJ308142 vs. SwissProt
Match: RS16_NEUCR (40S ribosomal protein S16 OS=Neurospora crassa GN=rps-16 PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.069e-9 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGG+GAR+RFQ SYR Sbjct: 114 TLLVADPRRCEPKKFGGKGARSRFQKSYR 142
BLAST of AJ308142 vs. SwissProt
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.069e-9 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+R+Q SYR Sbjct: 118 TLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of AJ308142 vs. SwissProt
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 7.069e-9 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+R+Q SYR Sbjct: 118 TLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of AJ308142 vs. TAIR peptide
Match: AT5G18380.1 (| Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr5:6090253-6090693 REVERSE LENGTH=146) HSP 1 Score: 59.3066 bits (142), Expect = 5.625e-10 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+R+Q SYR Sbjct: 118 TLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of AJ308142 vs. TAIR peptide
Match: AT2G09990.1 (| Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr2:3781442-3781882 FORWARD LENGTH=146) HSP 1 Score: 59.3066 bits (142), Expect = 5.625e-10 Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCEPKKFGGRGAR+R+Q SYR Sbjct: 118 TLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of AJ308142 vs. TAIR peptide
Match: AT3G04230.1 (| Symbols: | Ribosomal protein S5 domain 2-like superfamily protein | chr3:1113169-1113609 REVERSE LENGTH=146) HSP 1 Score: 55.8398 bits (133), Expect = 6.219e-9 Identity = 26/29 (89.66%), Postives = 26/29 (89.66%), Query Frame = 1 Query: 1 TLLVADPRRCEPKKFGGRGARARFQTSYR 87 TLLVADPRRCE KKFGG GARARFQ SYR Sbjct: 118 TLLVADPRRCESKKFGGPGARARFQKSYR 146 The following BLAST results are available for this feature:
BLAST of AJ308142 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AJ308142 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 10
BLAST of AJ308142 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AJ308142 ID=AJ308142; Name=AJ308142; organism=Pisum sativum; type=EST; length=130bpback to top |