AM161884
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161884 vs. TrEMBL
Match: Q53YK5_ARATH (Peroxisomal sarcosine/pipecolate oxidase OS=Arabidopsis thaliana GN=At2g24580 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.939e-23 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 +VDS PV Q CMYSMTPDEDFVIDFLGGEFG++VV+G GFSGHGFKMAP +G Sbjct: 313 MVDSEGPVATQLCMYSMTPDEDFVIDFLGGEFGRDVVVGGGFSGHGFKMAPAVG 366 HSP 2 Score: 38.5058 bits (88), Expect = 1.939e-23 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = -1 Query: 388 KRPWGSGVMMDEMKEWIEGRF 450 KRPWG GV ++E+KEWI+ RF Sbjct: 290 KRPWGPGVKLEELKEWIKERF 310
BLAST of AM161884 vs. TrEMBL
Match: B9N674_POPTR (Sarcosine oxidase OS=Populus trichocarpa GN=SOX2 PE=4 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.292e-19 Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 LVD PV QSCMYSMTPDEDFV+DFLGGEFGK+VV+G GFSGHGFKMAPV+G Sbjct: 312 LVDYGGPVATQSCMYSMTPDEDFVLDFLGGEFGKDVVIGGGFSGHGFKMAPVVG 365
BLAST of AM161884 vs. TrEMBL
Match: B9TA32_RICCO (Sarcosine oxidase, putative OS=Ricinus communis GN=RCOM_2005550 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.073e-18 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 LVDS PV QSCMYSMTPDED+VIDFLG EFGK+VV+G GFSGHGFKMAPVIG Sbjct: 311 LVDSDGPVATQSCMYSMTPDEDYVIDFLGEEFGKDVVVGGGFSGHGFKMAPVIG 364
BLAST of AM161884 vs. TrEMBL
Match: Q2QP28_ORYSJ (Sarcosine oxidase, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g35890 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.086e-18 Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = -3 Query: 218 PVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 361 PV++QSCMYSMTPDEDF+IDF+GGEFGK+VV+GAGFSGHGFKM P +G Sbjct: 328 PVIRQSCMYSMTPDEDFIIDFVGGEFGKDVVVGAGFSGHGFKMGPAVG 375
BLAST of AM161884 vs. TrEMBL
Match: Q0IMT5_ORYSJ (Os12g0543600 protein OS=Oryza sativa subsp. japonica GN=Os12g0543600 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.086e-18 Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = -3 Query: 218 PVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 361 PV++QSCMYSMTPDEDF+IDF+GGEFGK+VV+GAGFSGHGFKM P +G Sbjct: 328 PVIRQSCMYSMTPDEDFIIDFVGGEFGKDVVVGAGFSGHGFKMGPAVG 375
BLAST of AM161884 vs. TrEMBL
Match: A3CI64_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_36399 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.086e-18 Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = -3 Query: 218 PVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 361 PV++QSCMYSMTPDEDF+IDF+GGEFGK+VV+GAGFSGHGFKM P +G Sbjct: 308 PVIRQSCMYSMTPDEDFIIDFVGGEFGKDVVVGAGFSGHGFKMGPAVG 355
BLAST of AM161884 vs. TrEMBL
Match: A2ZLC9_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38628 PE=4 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.086e-18 Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = -3 Query: 218 PVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 361 PV++QSCMYSMTPDEDF+IDF+GGEFGK+VV+GAGFSGHGFKM P +G Sbjct: 328 PVIRQSCMYSMTPDEDFIIDFVGGEFGKDVVVGAGFSGHGFKMGPAVG 375
BLAST of AM161884 vs. TrEMBL
Match: B9ILE2_POPTR (Sarcosine oxidase OS=Populus trichocarpa GN=SOX1 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.550e-17 Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 LVD PV Q CMYSMTPD DFVIDFLGGEFGK+VV+G GFSGHGFKMAPV+G Sbjct: 311 LVDYGGPVATQLCMYSMTPDGDFVIDFLGGEFGKDVVVGGGFSGHGFKMAPVVG 364 HSP 2 Score: 60.4622 bits (145), Expect = 6.496e-8 Identity = 41/109 (37.61%), Postives = 57/109 (52.29%), Query Frame = -1 Query: 127 KRPWGSGVMMDEMKEWIEGRFCWRWLIQPSL**NSLVCIQ*HRMRIL*LISWV-VSLGRMWFWVQGFRVTGLRWLRLLGKILTELAVGGETNEVDLKHFRIGRFNVSSK 450 KRPWG G+ D MKEWIEGRF L+ + +C+ +I ++ G+ GF G + ++G+IL +LA+ GE VDLKHFRI RF + K Sbjct: 288 KRPWGPGISSDSMKEWIEGRF--SGLVDYGGPVATQLCMYSMTPDGDFVIDFLGGEFGKDVVVGGGFSGHGFKMAPVVGRILADLALSGEAKGVDLKHFRIQRFQENPK 394
BLAST of AM161884 vs. TrEMBL
Match: D7LIA0_ARALY (Sarcosine oxidase family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481314 PE=4 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.024e-17 Identity = 41/54 (75.93%), Postives = 46/54 (85.19%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 +VDS PV Q CMYSMTPDEDFVIDFLGGE G++VV+G GFSGHGFKMAP +G Sbjct: 313 MVDSEGPVATQLCMYSMTPDEDFVIDFLGGELGRDVVVGGGFSGHGFKMAPAVG 366
BLAST of AM161884 vs. TrEMBL
Match: B6TF50_MAIZE (Sarcosine oxidase OS=Zea mays PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.453e-17 Identity = 40/48 (83.33%), Postives = 45/48 (93.75%), Query Frame = -3 Query: 218 PVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 361 PV + SCMYSMTPD+DFVIDFLGGEFGK+VV+GAGFSGHGFKMAP +G Sbjct: 326 PVTRLSCMYSMTPDKDFVIDFLGGEFGKDVVVGAGFSGHGFKMAPTVG 373
BLAST of AM161884 vs. SwissProt
Match: SOX_ARATH (Probable sarcosine oxidase OS=Arabidopsis thaliana GN=At2g24580 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.144e-24 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 +VDS PV Q CMYSMTPDEDFVIDFLGGEFG++VV+G GFSGHGFKMAP +G Sbjct: 313 MVDSEGPVATQLCMYSMTPDEDFVIDFLGGEFGRDVVVGGGFSGHGFKMAPAVG 366 HSP 2 Score: 38.5058 bits (88), Expect = 1.144e-24 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = -1 Query: 388 KRPWGSGVMMDEMKEWIEGRF 450 KRPWG GV ++E+KEWI+ RF Sbjct: 290 KRPWGPGVKLEELKEWIKERF 310
BLAST of AM161884 vs. SwissProt
Match: SOX_RABIT (Peroxisomal sarcosine oxidase OS=Oryctolagus cuniculus GN=PIPOX PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.326e-9 Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 218 EPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 364 EP + +SCMY+ TPDE F++D N+V+GAGFSGHGFK+APV+G Sbjct: 312 EPAVIESCMYTNTPDEQFILD--RHPKYDNIVIGAGFSGHGFKLAPVVG 358
BLAST of AM161884 vs. SwissProt
Match: SOX_HUMAN (Peroxisomal sarcosine oxidase OS=Homo sapiens GN=PIPOX PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 1.326e-9 Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = -3 Query: 218 EPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 364 EP + +SCMY+ TPDE F++D N+V+GAGFSGHGFK+APV+G Sbjct: 312 EPAVIESCMYTNTPDEQFILD--RHPKYDNIVIGAGFSGHGFKLAPVVG 358
BLAST of AM161884 vs. SwissProt
Match: SOX_MOUSE (Peroxisomal sarcosine oxidase OS=Mus musculus GN=Pipox PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 8.593e-9 Identity = 27/49 (55.10%), Postives = 36/49 (73.47%), Query Frame = -3 Query: 218 EPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 364 EP + + CMY+ TPDE F++D N+V+GAGFSGHGFK+APV+G Sbjct: 312 EPDIMERCMYTNTPDEHFILDCHPKY--DNIVIGAGFSGHGFKLAPVVG 358
BLAST of AM161884 vs. SwissProt
Match: SOX_BOVIN (Peroxisomal sarcosine oxidase OS=Bos taurus GN=PIPOX PE=2 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 4.265e-8 Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = -3 Query: 218 EPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 364 EP + + CMY+ TPD FV+D N+V+GAGFSGHGFK++PV+G Sbjct: 314 EPAVMEHCMYTNTPDGHFVLD--RHPKYDNIVIGAGFSGHGFKLSPVVG 360
BLAST of AM161884 vs. TAIR peptide
Match: AT2G24580.1 (| Symbols: | FAD-dependent oxidoreductase family protein | chr2:10444928-10446178 REVERSE LENGTH=416) HSP 1 Score: 94.3597 bits (233), Expect = 1.349e-25 Identity = 42/54 (77.78%), Postives = 47/54 (87.04%), Query Frame = -3 Query: 218 LVDSTEPVMKQSCMYSMTPDEDFVIDFLGGEFGKNVVLGAGFSGHGFKMAPVIG 379 +VDS PV Q CMYSMTPDEDFVIDFLGGEFG++VV+G GFSGHGFKMAP +G Sbjct: 313 MVDSEGPVATQLCMYSMTPDEDFVIDFLGGEFGRDVVVGGGFSGHGFKMAPAVG 366 HSP 2 Score: 38.5058 bits (88), Expect = 1.349e-25 Identity = 14/21 (66.67%), Postives = 18/21 (85.71%), Query Frame = -1 Query: 388 KRPWGSGVMMDEMKEWIEGRF 450 KRPWG GV ++E+KEWI+ RF Sbjct: 290 KRPWGPGVKLEELKEWIKERF 310 The following BLAST results are available for this feature:
BLAST of AM161884 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AM161884 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 5
BLAST of AM161884 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161884 ID=AM161884; Name=AM161884; organism=Pisum sativum; type=EST; length=450bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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