AM161960
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of AM161960 vs. TrEMBL
Match: Q5DW42_PHAVU (Phototropin OS=Phaseolus vulgaris GN=Pvphot2 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.864e-29 Identity = 80/152 (52.63%), Postives = 93/152 (61.18%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKN----DENSAATKAPSGDDD------------DDQILTEAAIAERTAEWGLVVNTSNFKAGIE----TXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 N S+ + NKWMAFA K D NSA + +D+ D QILTEA IAER AEWG+VVNT NF+A E F ESTRTSG+SN+ S++ SG+ PRVSQ+LKEALATLQQTFVVSDATKPDCPI Sbjct: 60 NSVSNKESANKWMAFAGKPNFAVDGNSAKKDKSTTEDNYLRNHLKEKSSSDQQILTEATIAERAAEWGVVVNTGNFRAMGEENTGASFDGDRTRNLSDRFAESTRTSGESNFGSDST-SGLFPRVSQELKEALATLQQTFVVSDATKPDCPI 210
BLAST of AM161960 vs. TrEMBL
Match: D7U4N9_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_38.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00023842001 PE=4 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.472e-20 Identity = 64/138 (46.38%), Postives = 78/138 (56.52%), Query Frame = 2 Query: 71 KNGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVE-----STRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 + G SS +NKWMAF + S T D +T + IAERTAEWGLV+ S+ G+ +E +TRTS +SNY E SG PRVSQ+LK+AL+TLQQTFVVSDATKPDCPI Sbjct: 66 EQGGSSREPINKWMAFQREASGKSNVT---------DNSITASTIAERTAEWGLVMK-SDLGDGLRALGRSFGEGDRSKKSLERLAGETTRTSEESNYEGE---SGSFPRVSQELKDALSTLQQTFVVSDATKPDCPI 190
BLAST of AM161960 vs. TrEMBL
Match: B9RKW8_RICCO (Serine/threonine protein kinase, putative OS=Ricinus communis GN=RCOM_1563760 PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.922e-20 Identity = 69/149 (46.31%), Postives = 88/149 (59.06%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAF-----------ANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTS----NFKA-GIETXXXXXXXXXXXXXF-VESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 + +SS NKWMAF AN+ +N++ T +G Q+LTEA+IAERTAEWGLVV + +FKA + T F V+STRTS +S +G PRVSQ+LK+AL++LQQTFVVSDATKPDCPI Sbjct: 62 SSSSSRAPPNKWMAFGKEGSSVTSSDANRATDNNSFTNF-NGKSISQQVLTEASIAERTAEWGLVVKSDVGEGSFKAINMSTGDGDRSKKNSLERFAVDSTRTSEESE-------AGAFPRVSQELKDALSSLQQTFVVSDATKPDCPI 202
BLAST of AM161960 vs. TrEMBL
Match: Q0GA16_SOLLC (Phototropin-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.055e-18 Identity = 65/134 (48.51%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 98 VNKWMAFANK-NDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTS----NFKAGIETXXXXXXXXXXXXXFVE-----STRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +NKWMAF K ND+N D+ D QI E +I+ER AEWGL V T +F A + +E STRTS +SN +E PRVSQDLK+ALATLQQTFVVSDATKPDCPI Sbjct: 53 INKWMAFDLKGNDQN---------DNADSQIPGETSISERAAEWGLTVRTDVGEGSFHAISRSGQNSFADGERSKNSLEKNSVGSTRTSEESNLGAE------FPRVSQDLKDALATLQQTFVVSDATKPDCPI 171
BLAST of AM161960 vs. TrEMBL
Match: B9HPL6_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_1085864 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.055e-18 Identity = 58/124 (46.77%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 122 NKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTS----NFKAGI----ETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 + N NS++ + PS ++ILTEA+IA R+AEWGLVV + FK+ + V+STRTS E G+ PRVSQ+LK+ALATLQQTFVVSDATKPDCPI Sbjct: 42 SSNHNNSSSNRQPSSSSSSNKILTEASIAARSAEWGLVVRSDVGEGTFKSTAIRSEQLEDDGGDTSKKNSFLVDSTRTS------EEDGAGGVFPRVSQELKDALATLQQTFVVSDATKPDCPI 159
BLAST of AM161960 vs. TrEMBL
Match: A7LI54_SOLLC (Phototropin-2 OS=Solanum lycopersicum GN=PHOT2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.055e-18 Identity = 65/134 (48.51%), Postives = 76/134 (56.72%), Query Frame = 2 Query: 98 VNKWMAFANK-NDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTS----NFKAGIETXXXXXXXXXXXXXFVE-----STRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +NKWMAF K ND+N D+ D QI E +I+ER AEWGL V T +F A + +E STRTS +SN +E PRVSQDLK+ALATLQQTFVVSDATKPDCPI Sbjct: 53 INKWMAFDLKGNDQN---------DNADSQIPGETSISERAAEWGLTVRTDVGEGSFHAISRSGQNSFADGERSKNSLEKNSVGSTRTSEESNLGAE------FPRVSQDLKDALATLQQTFVVSDATKPDCPI 171
BLAST of AM161960 vs. TrEMBL
Match: B9MZ36_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_294045 PE=4 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.334e-13 Identity = 51/98 (52.04%), Postives = 58/98 (59.18%), Query Frame = 2 Query: 197 AAIAERTAEWGLVVNTS----NFKA---GIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 A+IAERTAEWG+ V + +FKA E VESTRTS E+ G +PRVSQ+LK ALATLQQTFVVSDATKPD PI Sbjct: 1 ASIAERTAEWGIFVRSDVGERSFKAIATRSEQEENGGNRSKKNSFMVESTRTS------EESEAGGTVPRVSQELKNALATLQQTFVVSDATKPDYPI 92
BLAST of AM161960 vs. TrEMBL
Match: Q765V9_ADICA (Phototropin 2 OS=Adiantum capillus-veneris GN=PHOT2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.633e-11 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 134 ENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGM-IPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 E A+ AP+ + D +IL++ +AER A+WGLVV +AG+ F + TS + ++ G+ IPRVS+DLK+AL T QQTFVVSDAT+PD PI Sbjct: 129 EAEKASPAPA-EKGDHKILSDDGVAERAAQWGLVVKG---RAGVGARTSNEEKRTDS--FQQQRGTSLSVRSSEDSEHGGLYIPRVSKDLKDALETFQQTFVVSDATRPDYPI 235
BLAST of AM161960 vs. TrEMBL
Match: B6SS20_MAIZE (Phototropin-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.093e-11 Identity = 53/137 (38.69%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 68 EKNGNSSGNTVNKWMAFANKNDENSA-ATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSG--MIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 E + + V KWMAF + +D S A AP + + E A + TA ++F+ G ++ V STR+S D AR SG +PRVSQ+LK+AL++LQQTFVVSDAT+PDCPI Sbjct: 3 ESSSRQAAEMVEKWMAFPSGSDAGSGFAFPAPRSVSGAGKEIVELA-SPSTATASAGNRQASFQRGRDSG-------------VGSTRSSMDG-----ARASGDSSMPRVSQELKDALSSLQQTFVVSDATRPDCPI 120
BLAST of AM161960 vs. TrEMBL
Match: A8MS49_ARATH (Uncharacterized protein At5g58140.3 OS=Arabidopsis thaliana GN=At5g58140 PE=4 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.076e-10 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. SwissProt
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.176e-11 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. SwissProt
Match: PHOT1_ARATH (Phototropin-1 OS=Arabidopsis thaliana GN=PHOT1 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 9.143e-10 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 2 Query: 107 WMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGM------------IPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 WMA + + E + + + E +R AEWGLV+ T K G + +T+ N + R SG IPRVS+DLK+AL+T QQTFVVSDATKPD PI Sbjct: 85 WMALKDPSPETISKKTITAEKPQKSAVAAE----QRAAEWGLVLKTDT-KTG-KPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEMSDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPI 211
BLAST of AM161960 vs. SwissProt
Match: PHOT2_ORYSJ (Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.252e-8 Identity = 47/135 (34.81%), Postives = 58/135 (42.96%), Query Frame = 2 Query: 92 NTVNKWMAFANKNDENSAA------TKAPSGDDDDDQILTEAAIAERTA---EWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 + V KWMAF + A APSG Q +A TA G S+ G+ R S DS +PRVSQ+LK+AL++LQQTFVVSDAT+PDCPI Sbjct: 12 DAVEKWMAFPTSGGGGATAGLEIVAEDAPSGSSGAHQQQAWRPVAPATAGRDSGGTGSGKSSVDGGVG-------------------RASHDS-----------LPRVSQELKDALSSLQQTFVVSDATRPDCPI 116
BLAST of AM161960 vs. SwissProt
Match: PHT1B_ORYSJ (Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 3.841e-8 Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 167 DDDDDQILTEAAIAERTAEWGLVVNTSNFKA---GIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 D ++D ++ + +R AEWGLV+ T + G+ S RTS + N + + + IPRVS++L+ AL+ QQTFVVSDAT P+ PI Sbjct: 63 DREEDNVVAQ----QRAAEWGLVLQTDHHTGLPQGVSARPSSG-----------SARTSSEDN-PQQQQSAAAIPRVSEELRAALSVFQQTFVVSDATHPNHPI 150
BLAST of AM161960 vs. SwissProt
Match: PHT1A_ORYSJ (Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 3.841e-8 Identity = 37/104 (35.58%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 167 DDDDDQILTEAAIAERTAEWGLVVNTSNFKA---GIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 D ++D ++ + +R AEWGLV+ T + G+ S RTS + N + + + IPRVS++L+ AL+ QQTFVVSDAT P+ PI Sbjct: 63 DREEDNVVAQ----QRAAEWGLVLQTDHHTGLPQGVSARPSSG-----------SARTSSEDN-PQQQQSAAAIPRVSEELRAALSAFQQTFVVSDATHPNHPI 150
BLAST of AM161960 vs. TAIR peptide
Match: AT5G58140.1 (| Symbols: PHOT2, NPL1 | phototropin 2 | chr5:23524771-23529993 FORWARD LENGTH=915) HSP 1 Score: 68.1662 bits (165), Expect = 2.524e-12 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. TAIR peptide
Match: AT5G58140.3 (| Symbols: PHOT2, NPL1 | phototropin 2 | chr5:23524771-23529947 FORWARD LENGTH=898) HSP 1 Score: 68.1662 bits (165), Expect = 2.524e-12 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. TAIR peptide
Match: AT5G58140.2 (| Symbols: PHOT2, NPL1 | phototropin 2 | chr5:23524771-23529993 FORWARD LENGTH=915) HSP 1 Score: 68.1662 bits (165), Expect = 2.524e-12 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. TAIR peptide
Match: AT5G58140.4 (| Symbols: PHOT2, NPL1 | phototropin 2 | chr5:23524771-23528541 FORWARD LENGTH=689) HSP 1 Score: 68.1662 bits (165), Expect = 2.524e-12 Identity = 51/133 (38.35%), Postives = 65/133 (48.87%), Query Frame = 2 Query: 74 NGNSSGNTVNKWMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGL-VVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGMIPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 +GN+ G++ +KWM F + A I ERTAEWGL V + GI +R S + + +SE SG PRVSQ+LK AL+TLQQTFVVSDAT+P CPI Sbjct: 47 DGNNKGSS-SKWMEFQDS-----------------------AKITERTAEWGLSAVKPDSGDDGISFKLSSEVERSK-----NMSRRSSEESTSSE---SGAFPRVSQELKTALSTLQQTFVVSDATQPHCPI 147
BLAST of AM161960 vs. TAIR peptide
Match: AT3G45780.2 (| Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 | chr3:16818557-16823960 FORWARD LENGTH=996) HSP 1 Score: 62.7734 bits (151), Expect = 1.060e-10 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 2 Query: 107 WMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGM------------IPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 WMA + + E + + + E +R AEWGLV+ T K G + +T+ N + R SG IPRVS+DLK+AL+T QQTFVVSDATKPD PI Sbjct: 85 WMALKDPSPETISKKTITAEKPQKSAVAAE----QRAAEWGLVLKTDT-KTG-KPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEMSDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPI 211
BLAST of AM161960 vs. TAIR peptide
Match: AT3G45780.1 (| Symbols: PHOT1, NPH1, JK224, RPT1 | phototropin 1 | chr3:16818557-16823960 FORWARD LENGTH=996) HSP 1 Score: 62.7734 bits (151), Expect = 1.060e-10 Identity = 46/133 (34.59%), Postives = 60/133 (45.11%), Query Frame = 2 Query: 107 WMAFANKNDENSAATKAPSGDDDDDQILTEAAIAERTAEWGLVVNTSNFKAGIETXXXXXXXXXXXXXFVESTRTSGDSNYASEARLSGM------------IPRVSQDLKEALATLQQTFVVSDATKPDCPI 469 WMA + + E + + + E +R AEWGLV+ T K G + +T+ N + R SG IPRVS+DLK+AL+T QQTFVVSDATKPD PI Sbjct: 85 WMALKDPSPETISKKTITAEKPQKSAVAAE----QRAAEWGLVLKTDT-KTG-KPQGVGVRNSGGTENDPNGKKTTSQRNSQNSCRSSGEMSDGDVPGGRSGIPRVSEDLKDALSTFQQTFVVSDATKPDYPI 211 The following BLAST results are available for this feature:
BLAST of AM161960 vs. TrEMBL
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Trembl) Total hits: 10
BLAST of AM161960 vs. SwissProt
Analysis Date: 2010-12-28 (Homology Analysis: Pisum sativum unigene v1 vs Swissprot) Total hits: 5
BLAST of AM161960 vs. TAIR peptide
Analysis Date: 2011-02-03 (Homology Analysis: Pisum sativum unigene v1 vs TAIR 10 peptide) Total hits: 6
InterPro
Analysis Name: InterProScan analysis for Pisum sativum unigene v1
Date Performed: 2010-12-29
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >AM161960 ID=AM161960; Name=AM161960; organism=Pisum sativum; type=EST; length=480bpback to top |