CaC6121, CaC6121 (genetic_marker) Cicer sp.

Marker Overview


Name	CaC6121
Genbank ID	N/A
Type	SSR
Species	Cicer sp.
Repeat Motif	(ta)5
Primer 1	CaC6121.Forward Primer: CTGTAATGGTGGCAAGCACA
Primer 2	CaC6121.Reverse Primer: TAGCACCCGCTTCAGAATTG
Max Length	233
Publication	[view all]

Publications


Year	Publication
2014	Deokar AA, Ramsay L, Sharpe AG, Diapari M, Sindhu A, Bett K, Warkentin TD, Tar An B. Genome wide SNP identification in chickpea for use in development of a high density genetic map and improvement of chickpea reference genome assembly. BMC genomics. 2014 Aug 23; 15(1):708.

Sequence

>CaC6121 ID=CaC6121; Name=CaC6121; organism=Cicer sp.; type=genetic_marker; length=1015bp
AAGTATGATATAGATAATTGAAGGCACATGTTTAGTATTCATTTGTTCCT
CATCATTCTGTTACCCACTtctctcTAACCCTAAATTATCTCCTCTCATT
TCTCATCTCCCTCCACAACTACTCCGGCGAGGACAGCCTATCAGGCACCG
CCACCGACCACcgcgcgcgACCTTGCGTCCCTGCGTAAGTGATTTCCAGC
CTCCACAGTGAAGAAGTTCAACAAATAGTTTCTGAAAGGGAAAATCTTTC
TGTAATGGTGGCAAGCACAAGTACTCTCCAATTTTCCATTGCATTTTACT
TGTTGCCCGTTCCTCTCGcacacaAAAATCCCCAACCTAAtctctctctc
CGCTTCAACCCTCCTTTGAATAGAGCCTTCAGGTCAAGATTTTGCGTTGC
CGCAATATTGCCACAAAGGCTTCCCCGTCGAGTATTTAGAGTACATGGCT
TGGTAGGtgatgatgaTtctctcACTTCCCCTCTACCAGATTTACACAAT
TCTGAAGCGGGTGCTAGTATTGACTTAAATCATCCaagaagaagTTTACT
TGTACAATTTACATGTGACTtgtgtgGTGAAAGAACAAAGAGGCTTGTAA
ACCGATTAGCTTATGAAAggggggCCAtttttATACAGTGTGCAGGATGT
AAGCGACATCACAAACTAGTTGACCATCTTGGACTCATCACGGAGTATGA
CTTTCGGGAGAAAATGAacacacacTCAGAAATTGTTCAAAATCAACAGT
AATAGCAAAATCAGCTGATGCCCAGATATTTCTCCCTTGTTGATGGTTTG
ATGGTGTGCCATTCTGTGAAGTaaaaaaTATAGGATGTGATCAGAAACCT
ATGATGCTGATGACATGTGTTGGTAGTATATTTGGCTTATATTTAATCTT
GGGGAAGTCTAGGTTACGTTACCCATTTGAAAATTATGAGTAGTTTACTC
atgatgatgTGGAACAAATGAATACTAAACATGTGCCTTCAATTATCTAT
ATCATACTTATTATT

Search form

CaC6121, CaC6121 (genetic_marker) Cicer sp.