CaSNP2, CaSNP2 (genetic_marker) Cicer sp.

Marker Overview


Name	CaSNP2
dbSNP ID	N/A
Type	SNP
SNP Alleles	N/A
5' Flanking Sequence	AATTTGTGCACACTGATAACAGATAAACTTATTGGCATTTAAGCTAGAGAACAAACTTTT AAACATCACTGTAAGCACTAATCTCTAGTAGGCCGAATGG
3' Flanking Sequence	AATTACCATTATAAGACCTCATTGAAGCTTGTGGCATGCCCTAGCATCGGAAGACATCTA ATAGTCCATAGCATTTATTTGAAATGAGCATGTTAGTCTA
Species	Cicer sp.
Publication	[view all]

Publications


Year	Publication
2012	Gaur R, Azam S, Jeena G, Khan AW, Choudhary S, Jain M, Yadav G, Tyagi AK, Chattopadhyay D, Bhatia S. High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L.). DNA research : an international journal for rapid publication of reports on genes and genomes. 2012 Oct; 19(5):357-73.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2012	LG2	N/A	135.97	CaSNP2	View
2	chickpea-ICC4958xPI489777-RIL-2015-2	LG6	N/A	89.88	CaSNP2	View
3	Chickpea-ICC4958/PI489777-RIL-2020	LG06	N/A	126.49	CaSNP2	View

Sequence

>CaSNP2 ID=CaSNP2; Name=CaSNP2; organism=Cicer sp.; type=genetic_marker; length=201bp
AATTTGTGCACACTGATAACAGATAAACTTATTGGCATTTAAGCTAGAGA
ACAAACTTTTAAACATCACTGTAAGCACTAATCTCTAGTAGGCCGAATGG
YAATTACCATTATAAGACCTCATTGAAGCTTGTGGCATGCCCTAGCATCG
GAAGACATCTAATAGTCCATAGCATTTATTTGAAATGAGCATGTTAGTCT
A

Search form

CaSNP2, CaSNP2 (genetic_marker) Cicer sp.