CaSNP239, CaSNP239 (genetic_marker) Cicer sp.

Marker Overview


Name	CaSNP239
dbSNP ID	N/A
Type	SNP
SNP Alleles	N/A
5' Flanking Sequence	ATCTGCGTCACCGAAGCTAGCGAGTTTTCATTTACATTTTGAGCGAAACTAAAATACCTA TTTCGCGATATCACTCGCACCACAAAACCCTCTATTCGCT
3' Flanking Sequence	TTTTCTCTCTCTATATCTCGTGCCAATCCCCGTTCTCTTTTATTCTGTTTATTTATTTAA TTAATTAAAAAGGCCAAATTTACCTCCTAATATATGCCCT
Species	Cicer sp.
Publication	[view all]

Publications


Year	Publication
2012	Gaur R, Azam S, Jeena G, Khan AW, Choudhary S, Jain M, Yadav G, Tyagi AK, Chattopadhyay D, Bhatia S. High-throughput SNP discovery and genotyping for constructing a saturated linkage map of chickpea (Cicer arietinum L.). DNA research : an international journal for rapid publication of reports on genes and genomes. 2012 Oct; 19(5):357-73.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2012	LG3	N/A	140.38	CaSNP239	View
2	chickpea-ICC4958xPI489777-RIL-2015-2	LG8	N/A	34.48	CaSNP239	View
3	Chickpea-ICC4958/PI489777-RIL-2020	LG08	N/A	108.47	CaSNP239	View

Sequence

>CaSNP239 ID=CaSNP239; Name=CaSNP239; organism=Cicer sp.; type=genetic_marker; length=201bp
ATCTGCGTCACCGAAGCTAGCGAGTTTTCATTTACATTTTGAGCGAAACT
AAAATACCTATTTCGCGATATCACTCGCACCACAAAACCCTCTATTCGCT
STTTTCTCTCTCTATATCTCGTGCCAATCCCCGTTCTCTTTTATTCTGTT
TATTTATTTAATTAATTAAAAAGGCCAAATTTACCTCCTAATATATGCCC
T

Search form

CaSNP239, CaSNP239 (genetic_marker) Cicer sp.