CaTMS1063, CaTMS1063 (genetic_marker) Cicer sp. | PulseDB

Marker Overview

Marker Overview


Name	CaTMS1063
Genbank ID	N/A
Type	SSR
Species	Cicer sp.
Repeat Motif	(TAA)12
Primer 1	CaTMS1063.Forward primer: AAAAATTAGTTTTGGTAATTGTTGG
Primer 2	CaTMS1063.Reverse primer: GGAGGTGATGGTGGCTAGAA
Product Length	218
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold548	chromosome	scaffold548:146503..146717 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2015	Khajuria YP, Saxena MS, Gaur R, Chattopadhyay D, Jain M, Parida SK, Bhatia S. Development and Integration of Genome-Wide Polymorphic Microsatellite Markers onto a Reference Linkage Map for Constructing a High-Density Genetic Map of Chickpea. PloS one. 2015; 10(5):e0125583.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2015	LG3	N/A	42.49	CaTMS1063	View
2	chickpea-ICC4958xPI489777-RIL-2015-2	LG8	N/A	116.3	CaTMS1063	View
3	Chickpea-ICC4958/PI489777-RIL-2020	LG08	N/A	116.46	CaTMS1063	View