H2J11, H2J11 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	H2J11
Genbank ID	N/A
Type	SSR
Species	Cicer arietinum
Germplasm	Hadas
Repeat Motif	(TGA)4
Primer 1	H2J11.Forward primer: TCCCTCACATATAACATTTCCCTA
Primer 2	H2J11.Reverse primer: ACAACACAAATGCAAAAGTTTCTT
Product Length	169
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca4	chromosome	Ca4:46433159..46433327 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr4	chromosome	chr4:46433159..46433327 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2005	Lichtenzveig J, Scheuring C, Dodge J, Abbo S, Zhang HB. Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2005 Feb; 110(3):492-510.

Germplasm


Stock Name	Type
Hadas	accession

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICCV2xJG62-RIL-F10-2011	LGVII	N/A	26.3	H2J11	View
2	chickpea-ICC3996xILWC184-F2	LG4	N/A	19.6	H2J11	View