ICCeM0039, ICCeM0039 (genetic_marker) Cicer arietinum | PulseDB

Marker Overview

Marker Overview


Name	ICCeM0039
Genbank ID	N/A
Type	SSR
Species	Cicer arietinum
Repeat Motif	(GAAAGT)5
Primer 1	ICCeM0039.Forward primer: GAATCCTGTTATGGCGGAGA
Primer 2	ICCeM0039.Reverse primer: GGCGGTGATGATGAAGAAGT
Product Length	252
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca6	chromosome	Ca6:55616555..55616806 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr6	chromosome	chr6:55616555..55616806 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2009	Varshney RK, Hiremath PJ, Lekha P, Kashiwagi J, Balaji J, Deokar AA, Vadez V, Xiao Y, Srinivasan R, Gaur PM, Siddique KH, Town CD, Hoisington DA. A comprehensive resource of drought- and salinity- responsive ESTs for gene discovery and marker development in chickpea (Cicer arietinum L.). BMC genomics. 2009; 10:523.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	chickpea-ICC4958xPI489777-RIL-2011	LG6	N/A	68	ICCeM0039	View
2	chickpea-ICC4958xPI489777-RIL-F10	LG6	N/A	73.15	ICCeM0039	View
3	chickpea-ICC4958xPI489777-RIL-F10-2012	LG06	N/A	48.29	ICCeM0039	View