PIP108, PIP108 (genetic_marker) Cicer sp. | PulseDB

Marker Overview

Marker Overview


Name	PIP108
Genbank ID	JK312467
Type	EST marker
Species	Cicer sp.
Primer 1	PIP108.Forward primer: TTGATGGCTCAGAAATTGTCA
Primer 2	PIP108.Reverse primer: TTAGAGCACCAAATCCAGCA
Product Length	172
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	JK312467

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca6	chromosome	Ca6:57948796..57948984 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr6	chromosome	chr6:57948796..57948984 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences
Lcu.2RBY.Chr4	supercontig	Lcu.2RBY.Chr4:277227649..277227846 .	Lens culinaris CDC Redberry genome v2.0	PCD marker alignment to genome using primer sequences
Chr11	supercontig	Chr11:4301511..4301688 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Chr_6-CM003608.1	supercontig	Chr_6-CM003608.1:9720626..9720807 .	Cajanus cajan Asha genome v1.0	PCD marker alignment to genome using primer sequences
Chr11_WLD	supercontig	Chr11_WLD:4698042..4698219 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences
Pl11_G27455	supercontig	Pl11_G27455:4037273..4037448 .	Phaseolus lunatus cv. G27455 genome v1.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2012	Choudhary S, Gaur R, Gupta S. EST-derived genic molecular markers: development and utilization for generating an advanced transcript map of chickpea. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 May; 124(8):1449-62.