PIP216, PIP216 (genetic_marker) Cicer sp. | PulseDB

Marker Overview

Marker Overview


Name	PIP216
Genbank ID	JK313842
Type	EST marker
Species	Cicer sp.
Primer 1	PIP216.Forward primer: AAACTCAAGCTTGGAGAAATCG
Primer 2	PIP216.Reverse primer: CGACATCCCACACAGTGAAG
Max Length	700
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	JK313842

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Ca2	chromosome	Ca2:2039994..2040563 .	Cicer arietinum CDC Frontier genome v1.0	PCD marker alignment to genome using primer sequences
chr2	chromosome	chr2:2039994..2040563 .	Cicer arietinum CDC Frontier NCBI RefSeq v1	PCD marker alignment to genome using primer sequences
Chr04	supercontig	Chr04:1988783..1989891 .	Phaseolus vulgaris G19833 genome v2.1	PCD marker alignment to genome using primer sequences
Vu04	supercontig	Vu04:41903586..41904494 .	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	PCD marker alignment to genome using primer sequences
Chr04_WLD	supercontig	Chr04_WLD:1625890..1626382 .	Phaseolus acutifolius acc. W6 15578 genome v2.0	PCD marker alignment to genome using primer sequences
Pl04_G27455	supercontig	Pl04_G27455:963076..964094 .	Phaseolus lunatus cv. G27455 genome v1.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2012	Choudhary S, Gaur R, Gupta S. EST-derived genic molecular markers: development and utilization for generating an advanced transcript map of chickpea. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 May; 124(8):1449-62.