LcSSR203, LcSSR203 (genetic_marker) Lens culinaris | PulseDB

Marker Overview

Marker Overview


Name	LcSSR203
Genbank ID	JF768368
Type	SSR
Species	Lens culinaris
Repeat Motif	(GA)3…(ATT)2
Primer 1	LcSSR203.Forward Primer: TAGTGTCTCAAGAGTGCCCAGA
Primer 2	LcSSR203.Reverse Primer: CACCCACTTGGAAAGGTCAT
Product Length	205
Publication	[view all]
Contact	Sabhyata Bhatia

Contact

Name

Details

Sabhyata Bhatia

First name:	Sabhyata
Last name:	Bhatia
Title:	Researcher
Institution:	National Institute of Plant Genome Research
Address:	Aruna Asaf Ali Marg, PO Box 10531, New Delhi 110067, India
Country:	India
Email:	sabhyata_bhatia@nipgr.res.in
Phone:	91 11-26735159
Fax:	91 11-26741658
Last update:	Dec 2015

References

External references for this genetic_marker


Database	Accession
DB:genbank	JF768368

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr6LG2	supercontig	chr6LG2:203352944..203353072 .	Pisum sativum Cameor genome v1a	PCD marker alignment to genome using primer sequences
Lcu.2RBY.Chr1	supercontig	Lcu.2RBY.Chr1:191604464..191604668 .	Lens culinaris CDC Redberry genome v2.0	PCD marker alignment to genome using primer sequences

Publications


Year	Publication
2015	Verma P, Goyal R, Chahota RK, Sharma TR, Abdin MZ, Bhatia S. Construction of a Genetic Linkage Map and Identification of QTLs for Seed Weight and Seed Size Traits in Lentil (Lens culinaris Medik.). 2015; 10(10):e0139666.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	lentil-PrecozxL830-RIL	LG5	N/A	0	LcSSR203	View