BMd-0010 | PulseDB

Marker Overview

Marker Overview


Name	BMd-0010
Genbank ID	X13329
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(GA)8
Primer 1	BMd-0010.Forward: GCTCACGTACGAGTTGAATCTCAG
Primer 2	BMd-0010.Reverse: ATCTGAGAGCAGCGACATGGTAG
Product Length	139
Publication	[view all]
Contact	Matthew Blair
Comment	Glutamine synthetase beta subunit

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

References

External references for this genetic_marker


Database	Accession
DB:genbank	X13329

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr01	supercontig	Chr01:48348060..48348197 .
Vu01	supercontig	Vu01:38819249..38819375 .
Pl01_G27455	supercontig	Pl01_G27455:44477592..44477725 .
Chr01_WLD	supercontig	Chr01_WLD:40407673..40407808 .

Publications


Year	Publication
2010	Córdoba JM, Chavarro C, Schlueter JA, Jackson SA, Blair MW. Integration of physical and genetic maps of common bean through BAC-derived microsatellite markers. BMC genomics. 2010 Jul 16; 11:436.
2003	Blair MW, Pedraza F, Buendia HF, Gaitán-Solís E, Beebe SE, Gepts P, Tohme J. Development of a genome-wide anchored microsatellite map for common bean (Phaseolus vulgaris L.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2003 Nov; 107(8):1362-74.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-DOR364/G19833-RIL-2010	LG01	N/A	26.1	BMd10	View
2	Bean-DOR364/G19833-RIL-2008	LG01	N/A	23.5	BMd010	View
3	Bean-Tiber/Starozagorski-Integrated	LG01	N/A	176.12	BMd10	View