ATA-0145 | PulseDB

Marker Overview

Marker Overview


Name	ATA-0145
Genbank ID	N/A
Type	SSR
Species	Phaseolus vulgaris
Repeat Motif	(TTA)20(4)
Primer 1	ATA-0145.Forward: ATGTGTCATTTAGTAGACTAAG
Primer 2	ATA-0145.Reverse: TATCTCCTGATATATTGAATTG
Product Length	140
Max Length	160
Publication	[view all]
Contact	Matthew Blair Matthew W. Blair

Contact

Name

Details

Matthew Blair

First name:	Matthew
Last name:	Blair
Institution:	International Center for Tropical Agriculture
Country:	Colombia
Email:	mwblaircgiar@gmail.com
Last update:	Aug 2009

Matthew W. Blair

First name:	Matthew
Last name:	Blair
Title:	Researcher
Institution:	Tennessee State Univ
Address:	Tennessee State Univ., Dep. of Agricultural and Environmental Science, Nashville, TN 37209
Country:	USA
Email:	mblair@tnstate.edu
Last update:	Feb 2013

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr04	supercontig	Chr04:11118191..11118345 .
Pl04_G27455	supercontig	Pl04_G27455:8348448..8348647 .
Chr04_WLD	supercontig	Chr04_WLD:11313300..11313415 .

Publications


Year	Publication
2013	Blair MW, Izquierdo P, Astudillo C, Grusak MA. A legume biofortification quandary: variability and genetic control of seed coat micronutrient accumulation in common beans. Frontiers in plant science. 2013; 4:275.
2008	Blair MW, Buendia HF, Giraldo MC, Metais I, Peltier D. Characterization of AT-rich microsatellites in common bean (Phaseolus vulgaris L.). Theor Appl Genet. 2008; 118:91-103.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Bean-Cerinza/G10022-BC2	LG11	N/A	0	ATA145	View
2	Bean-Cerinza/G10022-BC2-2012	LG11	N/A	0	ATA145	View
3	Bean-DOR364/G19833-RIL-2008	LG08	N/A	97.7	ATA145	View