Cc_v2.0_03035.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RRU4|A0A151RRU4_CAJCA (DUF4228 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_033216 PE=4 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 1.606e-101 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPKVAKKRERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQGVDVCRKDNDGSPPWKPALETILE 148 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPKVAKKRERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQGVDVCRKDNDGSPPWKPALETILE Sbjct: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPKVAKKRERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQGVDVCRKDNDGSPPWKPALETILE 148
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1L9D7|I1L9D7_SOYBN (DUF4228 domain-containing protein OS=Glycine max OX=3847 GN=100780937 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.041e-62 Identity = 113/163 (69.33%), Postives = 128/163 (78.53%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAP---KVAKKRERLVE----RQQVEE-GD-VVRVKLVLSKQELKDMLRKGGVSVNEVLALAQG------VDVCRKDNDGSPPWKPALETILE 148 MGNC+VL QE+VVRVMKSDGKILEYKAPIKV +V+ QFPG AIS+SLP+ HHLHPNTRLL+GQLYYLVP P P KV KKR R E QVE+ GD VVR+KLVLSKQELKD+++KGG+SV EVL+L QG VDVC + NDGS WKPALETI E Sbjct: 1 MGNCIVL-QENVVRVMKSDGKILEYKAPIKVHQVLNQFPGHAISKSLPVLHHLHPNTRLLKGQLYYLVPPPQPSPKKVNKKRVRFAEPDHDDDQVEDKGDEVVRIKLVLSKQELKDIVQKGGISVREVLSLVQGKGMDGDVDVCTRVNDGSHGWKPALETIPE 162
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2Q0K7|A0A0B2Q0K7_GLYSO (DUF4228 domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_026269 PE=4 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.041e-62 Identity = 113/163 (69.33%), Postives = 128/163 (78.53%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAP---KVAKKRERLVE----RQQVEE-GD-VVRVKLVLSKQELKDMLRKGGVSVNEVLALAQG------VDVCRKDNDGSPPWKPALETILE 148 MGNC+VL QE+VVRVMKSDGKILEYKAPIKV +V+ QFPG AIS+SLP+ HHLHPNTRLL+GQLYYLVP P P KV KKR R E QVE+ GD VVR+KLVLSKQELKD+++KGG+SV EVL+L QG VDVC + NDGS WKPALETI E Sbjct: 1 MGNCIVL-QENVVRVMKSDGKILEYKAPIKVHQVLNQFPGHAISKSLPVLHHLHPNTRLLKGQLYYLVPPPQPSPKKVNKKRVRFAEPDHDDDQVEDKGDEVVRIKLVLSKQELKDIVQKGGISVREVLSLVQGKGMDGDVDVCTRVNDGSHGWKPALETIPE 162
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371HVH4|A0A371HVH4_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_09164 PE=4 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 2.522e-57 Identity = 100/152 (65.79%), Postives = 116/152 (76.32%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPKVAKKRERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQ-------GVDVCRKDNDGSPPWKPALET 145 MGNC VL QE +VRVMKSDGK++EYK PIKV +V+ QFPG AISESL HHL+PNTRLLQG+LYYLVP P +KKR R E + EEGD++R+KLVLSKQELKDML+KGG+SVNEVL+L GV C K NDGSP WKPAL + Sbjct: 1 MGNCFVL-QEGMVRVMKSDGKVVEYKTPIKVHQVLNQFPGHAISESL---HHLNPNTRLLQGRLYYLVP-PPENFSKKRLRFAEAEG-EEGDLLRIKLVLSKQELKDMLQKGGISVNEVLSLVHAQKGMDDGVHGCNKYNDGSPGWKPALSS 146
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1LZK6|I1LZK6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100793955 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.045e-57 Identity = 107/162 (66.05%), Postives = 125/162 (77.16%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESL-PLRHHLHPNTRLLQGQLYYLVPLP---APKVAKKRERLV---ERQQVEE-GDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQ------GVDVCRKDNDGSPPWKPALETILE 148 MGNC+VL Q +VVRVMKSDGKILEYKAPI+V +V+ QF G AISESL P+ HHL+P TRLL+GQLYYLVP P + KV KKR R E QVE+ G VVR+KLVLSKQELKDM++KGG+SVNEVL+L Q GVD CR+D++G WKPALETI E Sbjct: 1 MGNCIVL-QRNVVRVMKSDGKILEYKAPIRVHQVLNQFRGHAISESLPPVLHHLNPYTRLLKGQLYYLVPPPQASSKKVNKKRVRFAEPDEDDQVEDKGCVVRIKLVLSKQELKDMVQKGGISVNEVLSLVQGKGIVGGVDACRRDDEGFHGWKPALETIPE 161
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2S9B2|A0A0B2S9B2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_030796 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.045e-57 Identity = 107/162 (66.05%), Postives = 125/162 (77.16%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESL-PLRHHLHPNTRLLQGQLYYLVPLP---APKVAKKRERLV---ERQQVEE-GDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQ------GVDVCRKDNDGSPPWKPALETILE 148 MGNC+VL Q +VVRVMKSDGKILEYKAPI+V +V+ QF G AISESL P+ HHL+P TRLL+GQLYYLVP P + KV KKR R E QVE+ G VVR+KLVLSKQELKDM++KGG+SVNEVL+L Q GVD CR+D++G WKPALETI E Sbjct: 1 MGNCIVL-QRNVVRVMKSDGKILEYKAPIRVHQVLNQFRGHAISESLPPVLHHLNPYTRLLKGQLYYLVPPPQASSKKVNKKRVRFAEPDEDDQVEDKGCVVRIKLVLSKQELKDMVQKGGISVNEVLSLVQGKGIVGGVDACRRDDEGFHGWKPALETIPE 161
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8M5J6|A0A8B8M5J6_ABRPR (Uncharacterized protein LOC113870904 OS=Abrus precatorius OX=3816 GN=LOC113870904 PE=4 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.218e-54 Identity = 96/156 (61.54%), Postives = 118/156 (75.64%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPL--PAPKVAKKRERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALAQG------VDVCRKDNDGSPPWKPALETILE 148 MGNCLVL QE++VR++KSDGK+LEYK PIKV V+KQF G AI +SLPL+HHLHPNTRLL GQLYYLVPL P+PK +KK+ E + +G V+RVKLV+SKQELK++ KGG+SVNE+L+L Q VDVC K + S WKP L+TI E Sbjct: 1 MGNCLVL-QENMVRIVKSDGKVLEYKTPIKVHHVLKQFSGHAICDSLPLQHHLHPNTRLLNGQLYYLVPLPRPSPKASKKKVSFAEPEV--QGGVIRVKLVISKQELKEIQGKGGISVNELLSLVQREKGMDVVDVCEKYHHRSQGWKPTLDTIPE 153
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LE04|A0A8B8LE04_ABRPR (Uncharacterized protein LOC113863567 OS=Abrus precatorius OX=3816 GN=LOC113863567 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.013e-49 Identity = 90/157 (57.32%), Postives = 118/157 (75.16%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPL--PAPKVAKK-RERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALA------QGVDVCRKDNDGSPPWKPALETILE 148 MGNCLVL QE+VVR+MK+DGKILEYK PI+V +V+ +F G A+SESLP+ HL PNT+LL+GQLYYLVPL P+PK KK R E Q V++ +VR+K+V+SKQEL+DML+ GG SVN++L+L +G D+ + +D S WKPALE+I E Sbjct: 1 MGNCLVL-QENVVRIMKTDGKILEYKTPIEVKQVLIEFAGHAVSESLPVLQHLEPNTKLLRGQLYYLVPLPPPSPKACKKVRFAEPEVQDVQQSSLVRIKVVISKQELQDMLQNGGFSVNKMLSLVHDEKRIEGKDLSQTSDDVSQVWKPALESIPE 156
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TVU5|A0A151TVU5_CAJCA (Uncharacterized protein At1g66480 family OS=Cajanus cajan OX=3821 GN=KK1_010372 PE=4 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 2.743e-47 Identity = 87/154 (56.49%), Postives = 119/154 (77.27%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPL--PAPKVAKK-RERLVERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALA---QGVDVCRKDNDGSPPWKPALETILE 148 MGNCLVL QE+VV++MK+DGKILEYK PIKV++V+ QF G A+SESL + +L PNT+LL+G+LYYLVPL P+PK KK R E Q +++ +VVR+K+V+SKQEL+DML+ GG SV+++++L +G D+ +K D S WKPALE+I E Sbjct: 1 MGNCLVL-QENVVKIMKTDGKILEYKIPIKVEEVLIQFSGHAVSESLTVLRYLEPNTKLLKGKLYYLVPLPPPSPKTNKKVRFADPEVQDMKKSNVVRIKVVISKQELQDMLQSGGFSVSKMMSLVHEDKGEDLSQKSEDVSQGWKPALESIPE 153
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EE76|A0A371EE76_MUCPR (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_57120 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 7.904e-47 Identity = 86/155 (55.48%), Postives = 118/155 (76.13%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPK-VAKKRERLV--ERQQVEEGDVVRVKLVLSKQELKDMLRKGGVSVNEVLALA---QGVDVCRK-DNDGSPPWKPALETILE 148 MGNCLV+ QE+VV+++KSDGK++EYK PIKV++V+ QF G A+SES+ +L PNT+LL+GQLYYLVPLP P + K+ R E Q V++ +VVR+KLV+SKQEL+DML+ GG SV+ +L+L +G D+ +K D+D S WKPALE+I E Sbjct: 1 MGNCLVV-QENVVKIVKSDGKVMEYKTPIKVEEVLIQFSGHAVSESVQALRYLEPNTKLLKGQLYYLVPLPPPSPKSNKKVRFADPEVQDVQKSNVVRIKLVISKQELQDMLQNGGFSVSNMLSLVHEDKGQDLSQKSDHDFSQAWKPALESIPE 154
BLAST of Cc_v2.0_03035.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3130155-3130676 FORWARD LENGTH=173) HSP 1 Score: 92.0485 bits (227), Expect = 4.309e-24 Identity = 59/177 (33.33%), Postives = 95/177 (53.67%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQF-PGQAISESLPLRHHLHPNTRLLQGQLYYLVPLPAPKVAKKRERL-----------------------VERQQVEEGDVVRVKLVLSKQELKDMLRKGGVS--VNEVLA---LAQGVDVCRKDNDGSPPWKPALETILE 148 MGNCLV+ ++ V+++M++DGK++EY+ P+KV ++ QF P ++ +SL HLHP +LL G+LYYL+P + ++ + + + + VVRVK+V+SKQEL+ +L+ G V V LA L D C K+ W+P L++I E Sbjct: 1 MGNCLVM-EKKVIKIMRNDGKVVEYRGPMKVHHILTQFSPHYSLFDSLTNNCHLHPQAKLLCGRLYYLLPQETNSIKHMKKTMKKVRFANPEVEKEEQEEDRLTDCCDNTKEKTNGVVRVKMVVSKQELEKLLQGGSVHEMVYRTLAKQHLCDDDDECHKEG-----WRPLLDSIPE 171
BLAST of Cc_v2.0_03035.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1047150-1047689 FORWARD LENGTH=179) HSP 1 Score: 87.8113 bits (216), Expect = 2.347e-22 Identity = 60/177 (33.90%), Postives = 98/177 (55.37%), Query Frame = 0 Query: 1 MGNCLVLLQEDVVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHPNTRLLQGQLYYLVP-------------LPAPKVAKKRERLVERQQVE-------EGD------VVRVKLVLSKQELKDMLRKGGVSVNEVLALAQGVDVCRKDNDG---SPPWKPALETILE 148 MGNCLV+ ++ V+++++ DGK+LEY+ PI V ++ QF G +IS + HL P+ +LL G+LYYL+P P+V + ERL+ ++ +GD VVR+K+V+ KQEL+ +L+ G V L + + + D+D + W+PAL++I E Sbjct: 1 MGNCLVM-EKKVIKIVRDDGKVLEYREPISVHHILTQFSGHSISHN---NTHLLPDAKLLSGRLYYLLPTTMTKKKVNKKVTFANPEV-EGDERLLREEEDSSESNSNIDGDDTKNVTVVRMKIVVHKQELEKLLQGGSVHEMMYQTLEKQLLLTSSDDDDLECNSGWRPALDSIPE 172
BLAST of Cc_v2.0_03035.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:22932638-22933201 REVERSE LENGTH=187) HSP 1 Score: 54.299 bits (129), Expect = 1.495e-9 Identity = 37/134 (27.61%), Postives = 60/134 (44.78%), Query Frame = 0 Query: 1 MGNCLV--------LLQED--VVRVMKSDGKILEYKAPIKVDKVMKQFPGQAISESLPLRHHLHP---NTRLLQGQLYYLVPLPAPKVAKKRERLVERQQVEEGDVVRV--KLVLSKQELKDMLRKGGVSVNEV 119 MGNC+ L +D +++V+ +G ++E PI + + +FPG I +SL LRH P L G +YYL+PL + A Q++ D + ++ K + L GG V +V Sbjct: 1 MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLRHSSPPLLHGEELFPGNIYYLLPLSSSAAATA--------QLDSSDQLSTPYRMSFGKTPIMAALSGGGCGVWKV 126 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Cc_v2.0_03035.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0
BLAST of Cc_v2.0_03035.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_03035.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03035.1; Name=Cc_v2.0_03035.1; organism=Cajanus cajan; type=mRNA; length=447bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_03035.1 >drCajCajn.Asha.2.0.Cc_v2.0_03035.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03035.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_03035.1; organism=Cajanus cajan; type=polypeptide; length=148bpback to top mRNA from alignment at CcLG02_v2.0:12630917..12631783- Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_03035.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03035.1; Name=Cc_v2.0_03035.1; organism=Cajanus cajan; type=mRNA; length=867bp; location=Sequence derived from: CcLG02_v2.0:12630917..12631783- (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG02_v2.0:12630917..12631783- >drCajCajn.Asha.2.0.Cc_v2.0_03035.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03035.1; Name=Cc_v2.0_03035.1; organism=Cajanus cajan; type=CDS; length=447bp; location=Sequence derived from: CcLG02_v2.0:12630917..12631783- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|