Cc_v2.0_03528.1

Transcript Overview


Name	Cc_v2.0_03528.1
Unique Name	drCajCajn.Asha.2.0.Cc_v2.0_03528.1
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	879

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CcLG02_v2.0	chromosome	CcLG02_v2.0:27515125..27517402 -	Cajanus cajan cv. Asha genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan cv. Asha genome v2.0	2024-06-26
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL	2024-07-30
InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11	2024-07-30

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjccaL348	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccaL442	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
anccaL0643	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL0658	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL0808	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL0872	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL1066	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anccaL1141	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
ccapsR224	Pisum sativum Cameor genome v1a	Pisum sativum
carccaL169	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccapsR241	Pisum sativum Cameor genome v1a	Pisum sativum
carccaL240	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
ccavrvR217	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavrvR238	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavfhR211	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR250	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavrvR280	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavfhR271	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR318	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavssR238	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavssR270	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavuR188	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR231	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccccaL0587	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavuR222	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR299	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccccaL0912	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavunR166	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR254	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
ccavunR194	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR317	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
rna-TanjilR_28365	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Psat6g056880.1	Pisum sativum Cameor genome v1a	Pisum sativum
evm.Ca_v2.0_07497	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
rna-XM_014656626.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-TanjilR_18633	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-TanjilR_24563	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-XM_014657918.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
jg1887.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Va02G044010.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigun07g103500.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
jg32555.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vfaba.Hedin2.R1.3g061320.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Phvul.007G178100.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vum_08G01757.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Vigun07g103500.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
evm.Ca_v2.0_08542	Cicer arietinum cv. CDC Frontier genome v2.0	Cicer arietinum
PvulFLAVERTChr07.1151	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
rna-KK1_029070	Cajanus cajan Asha genome v1.0	Cajanus cajan

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cc_v2.0_03528	drCajCajn.Asha.2.0.Cc_v2.0_03528	Cajanus cajan	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_03528.1.exon3	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.exon3	Cajanus cajan	exon
Cc_v2.0_03528.1.exon2	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.exon2	Cajanus cajan	exon
Cc_v2.0_03528.1.exon1	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.exon1	Cajanus cajan	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_03528.1.utr3p2	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.utr3p2	Cajanus cajan	three_prime_UTR
Cc_v2.0_03528.1.utr3p1	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.utr3p1	Cajanus cajan	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Cc_v2.0_03528.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_03528.1	Cajanus cajan	CDS
cds.Cc_v2.0_03528.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_03528.1_2	Cajanus cajan	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_03528.1.utr5p1	drCajCajn.Asha.2.0.Cc_v2.0_03528.1.utr5p1	Cajanus cajan	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCajCajn.Asha.2.0.Cc_v2.0_03528.1	drCajCajn.Asha.2.0.Cc_v2.0_03528.1	Cajanus cajan	polypeptide
drCajCajn.Asha.2.0.Cc_v2.0_03528.1	drCajCajn.Asha.2.0.Cc_v2.0_03528.1-protein	Cajanus cajan	polypeptide

Homology

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3LZD3|A0A2K3LZD3_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.728e-58
Identity = 151/253 (59.68%), Postives = 164/253 (64.82%), Query Frame = 0

Query:   47 SRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPP--AKPSAS---SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTT-AKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKRGGRK 292
            S+PR+P +HP+YEEMIKDAI SLKE+TGSSQYAIAKFIEEKHKQ LP NFKKLLL +LKK VA+GKLVKVKGSFKLP    KPS+S   +    KKPAA+KPK KP                           A+K KAK   KPK A+K      PK AA K KTT AKP      +    K  A   AKPK K  K ARTSTRTSPGKK P      KKV AAKKAPVKSVKPK VKSPAKK STKRGGRK
Sbjct:   17 SKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKP--------------------------SASKSKAKTVVKPKAASK------PKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKVP------KKVVAAKKAPVKSVKPKIVKSPAKKVSTKRGGRK 231

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3KDQ2|A0A2K3KDQ2_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 1.044e-57
Identity = 150/253 (59.29%), Postives = 163/253 (64.43%), Query Frame = 0

Query:   47 SRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPP--AKPSAS---SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTT-AKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKRGGRK 292
            S+PR+P +HP+YEEMIKDAI SLKE+TGSSQYAIAKFIEEKHKQ LP NFKKLLL +LKK VA+GKLVKVKGSFKLP    KPS+S   +    KKPAA+KPK KP                           A+K KAK   KPK A+K      PK AA K KTT AKP      +    K  A   AKPK K  K ARTSTRTSPGKK P      KKV AAKKAPVKSVKPK VKSPAKK S KRGGRK
Sbjct:   17 SKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKP--------------------------SASKSKAKTVVKPKAASK------PKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSAKVARTSTRTSPGKKVP------KKVVAAKKAPVKSVKPKIVKSPAKKVSVKRGGRK 231

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0A8KXA9|A0A0A8KXA9_9FABA (His5 protein OS=Vavilovia formosa OX=512756 GN=his5 PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.509e-57
Identity = 177/296 (59.80%), Postives = 195/296 (65.88%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEK-EEPKPEAKAKKTKEPKPKKVSR-PRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPA-AKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKAS-TKRGGRK 292
            MATEEP +AVEP  EPAT EPP+ EK EEPK E +  K  +    K +  PRNP +HP+YEEMIKDAI SLKEK GSSQYAIAKFIEEKHKQLP NFKKLLL +LKK+VA+GKL+KVKGSFKL                AAAK         KP          AKAKA  KAK AAKPKAKA  KPK A+K+K    KPK AAAKPK             AK KAA KP  K K+  V  A+TST+T+PGKK   AK APKKVA  KKAPVKSVK KSVKSPAKKA+  KRGGRK
Sbjct:    1 MATEEPIIAVEPVLEPATAEPPVSEKVEEPKAETQKTKKSKESKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKHKQLPANFKKLLLQNLKKKVASGKLLKVKGSFKLS---------------AAAK---------KPVVAKPKTKPAAKAKAAVKAKTAAKPKAKAVVKPKVASKSKSVTTKPKTAAAKPKVV-----------AKTKAAVKPKPKAKSAKV--AKTSTKTTPGKKIAVAKTAPKKVAVTKKAPVKSVKAKSVKSPAKKATGVKRGGRK 259

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3LH43|A0A2K3LH43_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.253e-54
Identity = 170/309 (55.02%), Postives = 185/309 (59.87%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEAKAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPP--AKPSAS---SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTT-AKPA-----------------AKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKAS 285
            MATEEP VAVEP PEP  TEPP  EKEE K EA+ K  +    KK S+PR+P +HP+YEEMIKDAI SLKE+TGSSQYAIAKFIEEKHKQ LP NFKKLLL +LKK VA+GKLVKVKGSFKLP    KPS+S   +    KKPAA+KPK KP                           A+K KAK   KPK A+K      PK AA K KTT AKP                  AKPK  +A                 K ARTSTRTSPGKK       PKKV AAKKAPVKSVKPK VKSPAKK S
Sbjct:    1 MATEEPIVAVEPVPEPTITEPPASEKEEAKVEAEKKTKESKP-KKASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKPS--------------------------ASKSKAKTVVKPKAASK------PKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSA-----------------KVARTSTRTSPGKK------VPKKVVAAKKAPVKSVKPKIVKSPAKKVS 253

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A3AM43|A0A6A3AM43_HIBSY (Histone H1.2 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110462pilonHSYRG00530 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 5.470e-54
Identity = 180/294 (61.22%), Postives = 199/294 (67.69%), Query Frame = 0

Query:    1 MATEE-PTVAVEPAPEPATTEPPLEEKEEPKP--EAKAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKP-AAKPK-PAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKRG 289
            MATEE  TV V  A EPA  + P E K   KP    KAK+ K  K     +PR P  H +YEEMIK+AI SLKE+TGSSQYAI KFIEEK K LP NFKKLLLFHLKK VAAGKLVKVKGSFKLP AK +AS+PAK+K  A        K K KPAAK   +AK A +KAPAK K  +KPK K  AKPKP+ KAK   +K K  AAAKPKTT         A+ KPKA  K  AKP  KPVK+ARTSTRTSPGK+A A K A    A  KKAP KSVKPKSVKSPAKKA+ +RG
Sbjct:    1 MATEEETTVVVGVATEPAE-DKPAETKAGSKPGKAKKAKEPKAKKAPASKKPRAPRAHATYEEMIKEAIVSLKERTGSSQYAITKFIEEKQKNLPGNFKKLLLFHLKKLVAAGKLVKVKGSFKLPSAKITASAPAKRKLLAT-------KAKDKPAAKSGKSAKPA-SKAPAKTKSVSKPKLKVVAKPKPSTKAKSTTSKTKAGAAAKPKTT---------ASTKPKATTKAKAKPAEKPVKSARTSTRTSPGKRAAAPKKA----ATPKKAPAKSVKPKSVKSPAKKATARRG 272

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J6UWN5|A0A7J6UWN5_THATH (Histone h1 OS=Thalictrum thalictroides OX=46969 GN=FRX31_033501 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.886e-52
Identity = 155/290 (53.45%), Postives = 175/290 (60.34%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEAKAKKTKEPKPKKVSRPRNP--PTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHK-QLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAK---PVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKA 284
            MAT E ++    A EP  T+P   + E  KPE K    KEPK KK +  R P   +HP Y EMI DAI SLKE+TGSSQYAI+KFI++KHK  LP NFKKLLLF +KK VAAGKLVKVKGSFKL P + SA+         AAKP PK   KPK  AKP         +A AK K  AKPKAKA    K  AK K A   KP A   K  +K   KPK + AKPKA AK   KPK     P K +RTSTRTSPGKK  A KP   K AA KK   KSVK  + K+PA+KA
Sbjct:    1 MATTEESIQ---ATEPMETDPAPIQPEVEKPEEKP--VKEPKAKKSAGRRKPRVSSHPPYIEMINDAIVSLKERTGSSQYAISKFIDDKHKSNLPSNFKKLLLFQIKKLVAAGKLVKVKGSFKLAPTRSSAT---------AAKPNPKVAVKPKTGAKP---------RAVAKPKTVAKPKAKA----KTVAKPKTAVAAKPKAVAAKPKSKAVVKPK-SVAKPKAGAKATTKPKVTAKPPAKVSRTSTRTSPGKKVTAVKPTVSKKAAVKKP--KSVKTATKKTPARKA 260

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S2XVI6|A0A1S2XVI6_CICAR (Histone H1 OS=Cicer arietinum OX=3827 GN=LOC101510135 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 7.070e-51
Identity = 166/295 (56.27%), Postives = 186/295 (63.05%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEA-KAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPA-KPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKA-PAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKRGGRK 292
            MATEEP VA   APEPAT E P +E EEPK E+ K KK KE KPKK S+PRNP +HP+YEEMIKDAI SLKEKTGSSQYAIAKFIEEK+KQLPPNFKKLLL +LKK VA+GKLVKVKGSFKL PA KPS ++  KK   A A+                    +AK KA  K+K A KPK+K+  AKP    K+KPAAKPKPA  KPK+ A                       + KPVKAARTSTRT+PGKK  AA         A          KSVKSP KK  TKRGG+K
Sbjct:    1 MATEEPIVAA--APEPATVESPAKEIEEPKSESQKVKKAKETKPKKTSKPRNPTSHPTYEEMIKDAIVSLKEKTGSSQYAIAKFIEEKYKQLPPNFKKLLLHNLKKNVASGKLVKVKGSFKLSPAMKPSVTTTKKK---AVAE------------KPKPKPKPSAKVKA-VKSKTAEKPKSKSVTAKP----KSKPAAKPKPADVKPKSAAAKPKSAAAKPKVAAKVKAAVKPKE-KPVKAARTSTRTTPGKKVAAAPKKAVAAKKAPVK------AKSVKSPVKKVLTKRGGKK 266

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8MF20|A0A8B8MF20_ABRPR (Histone H1-like OS=Abrus precatorius OX=3816 GN=LOC113872755 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.263e-49
Identity = 95/121 (78.51%), Postives = 105/121 (86.78%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEAKAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKL 121
            MATEEP V VE APEP   EPP E+ +EPKPEAK KK K+ KPK+ S+PRNPP+HPSYEEMI+DAI +LKEKTGSSQYAIAKF EEKHKQLPPNF+KLLL HLKK VA+GKLVKVKGSFKL
Sbjct:    1 MATEEPIVPVESAPEPTKVEPPREKDDEPKPEAKGKKAKDTKPKRSSKPRNPPSHPSYEEMIRDAIVTLKEKTGSSQYAIAKFNEEKHKQLPPNFRKLLLNHLKKLVASGKLVKVKGSFKL 121

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3NQY8|A0A2K3NQY8_TRIPR (Histone H1 (Fragment) OS=Trifolium pratense OX=57577 GN=histone H1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.799e-49
Identity = 157/285 (55.09%), Postives = 171/285 (60.00%), Query Frame = 0

Query:   25 EKEEPKPEAKAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPP--AKPSAS---SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTT-AKPA-----------------AKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKAS 285
            EKEEPK EA+ K  KE KPKK S+PR+P +HP+YEEMIKDAI SLKE+TGSSQYAIAKFIEEKHKQ LP NFKKLLL +LKK VA+GKLVKVKGSFKLP    KPS+S   +    KKPAA+KPK KP                           A+K KAK   KPK A+K      PK AA K KTT AKP                  AKPK  +A                 K ARTSTRTSPGKK       PKKV AAKKAPVKSVKPK VKSPAKK S
Sbjct:   20 EKEEPKVEAEKKT-KESKPKKASKPRSPASHPTYEEMIKDAIVSLKERTGSSQYAIAKFIEEKHKQQLPSNFKKLLLQNLKKNVASGKLVKVKGSFKLPSKTTKPSSSVTTASQANKKPAASKPKTKP--------------------------SASKSKAKTVVKPKAASK------PKTAAVKTKTTVAKPKPAAAKSKVAAKPKAGVKAKPKDKSA-----------------KVARTSTRTSPGKK------VPKKVVAAKKAPVKSVKPKIVKSPAKKVS 248

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8A4XFC6|A0A8A4XFC6_PEA (Histone H1 subtype 5 OS=Pisum sativum subsp. elatius OX=47742 GN=His5 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 4.492e-48
Identity = 164/294 (55.78%), Postives = 179/294 (60.88%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEA-KAKKTKEPKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKAS-TKRGGRK 292
            MATEEP +AVEP PEP    P  E+ EEPK +  K KK KE KPKK S+PRNP +HP+YEEMIKDAI SLKEK GSSQYAIAKFIEEK KQLP NFKKLLL  LKK+VA+GKLVKVKGS+KL                +AA  KP         A    AA  AK  A  KAK   KPK+K+                     KPK  A          A  KA A    KPKAK  K ARTS +T+PGKK   AKPAPKK  AAKKAPVKSVK KSVKSPAKKA+  KRGGRK
Sbjct:    1 MATEEPIIAVEPVPEP----PVSEKVEEPKAQTEKTKKAKESKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQSLKKKVASGKLVKVKGSYKL----------------SAAAKKPTVAKPKTKPAAKAKAAVKAKTAAKPKAKAVVKPKSKS------------------VTTKPKAAAAKPKAAAKPKAVAKAKAAVTPKPKAKSAKVARTSIKTTPGKKVAVAKPAPKKTVAAKKAPVKSVKAKSVKSPAKKATGVKRGGRK 256

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P26569|H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.232e-41
Identity = 129/239 (53.97%), Postives = 149/239 (62.34%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSAS----SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKR 288
            +HP+YEEMIKDAI +LKE+TGSSQYAI KFIEEKHK LPP F+KLLL +LK+ VA+ KLVKVK SFK+P A+ +A+    +P KKK    AKPK K                 A A APAKAK AAK   K  AK    AK     K K  AAKPK+ +        AA     A     K K +P KA+RTSTRTSPGKK  A  PA KKVA  KKAP KSVK   VKSPAK+AST++
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKV----------------AAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKS-------VAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAA--PA-KKVAVTKKAPAKSVK---VKSPAKRASTRK 270

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08283|H1_PEA (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.772e-36
Identity = 87/128 (67.97%), Postives = 99/128 (77.34%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPL----EEKEEPKPEAKAKKTKEPKPKKV---SRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKL 121
            MATEEP VAVE  PEP  TEP      E  E+ +P+A+ +KTK+ K  K    S+PRNP +HP+YEEMIKDAI SLKEK GSSQYAIAKFIEEK KQLP NFKKLLL +LKK VA+GKL+KVKGSFKL
Sbjct:    1 MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKASKPRNPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASGKLIKVKGSFKL 128

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P37218|H1_SOLLC (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.596e-22
Identity = 72/123 (58.54%), Postives = 81/123 (65.85%), Query Frame = 0

Query:    1 MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEAKAKKTKEPKPKKVSRPRN-PPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLP 122
            MATEEP +  E   E A  E   +E   P    KAKK  + K     R R+  PTHP Y EMIKDAI +LKE+TGSSQ+AI KFIEEK K LP NFKKLLL  LKK VA+ KLVKVK S+KLP
Sbjct:    1 MATEEPVIVNEVVEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSYKLP 123

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M5W4|H1_EUPES (Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 7.271e-21
Identity = 96/168 (57.14%), Postives = 108/168 (64.29%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKP 221
            +HPS+ EMI DAI++LKE+TGSSQYAI KF+E+KHKQLP NF+KLLLFHLKK VA+GKLVKVK SFKLP A+ + +    KK            PKPK AAKPK A            K  AKPKAKA    K  A  K  AK  P AAKPK  AK A KPK  AAKP
Sbjct:   50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAAPAPALAKKPTI---------PKPKVAAKPKTA------------KIGAKPKAKAKVAAKTKATTKTVAKKIP-AAKPK--AKTAGKPKTVAAKP 193

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P40267|H1_SOLPN (Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 5.912e-20
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHK-QLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPA 124
            THP Y +MIK+A+ +L EK GSS YA+AK++E+KHK +LP NF+K+L   LK   A GKL+K+K S+KL  A
Sbjct:   48 THPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEA 119

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P27806|H1_WHEAT (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.238e-17
Identity = 56/129 (43.41%), Postives = 67/129 (51.94%), Query Frame = 0

Query:   41 PKPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHK-QLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPA--------------------------------------KPSASS 130
            P PKK   PR  P HPSY EM+ +AI +LKE++GSS  AI KFIE+KHK  LP NF+K+LL  +KK VAAGKL KVKGS+KL  A                                      KP A +
Sbjct:   44 PGPKK---PRVTPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLAKAPAAVKPKTATKKKPAAKPKAKAPAKKTAAKSPAKKAAAKPKAKA 169

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q08864|H11_VOLCA (Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 5.797e-17
Identity = 62/117 (52.99%), Postives = 71/117 (60.68%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKH-KQLPP-NFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAP 168
            THP Y EM+KDAIT+LKE+ GSS  A+ KFIE K+ K +   NF K L   +K  V  GKLVKVKGSFKL  A     + AKK  P  AK   + KPK K  AKPK A    K KAP
Sbjct:   58 THPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKLVKVKGSFKLSEA---LKAKAKKSTPKKAKADGEAKPK-KSEAKPKKAEAVKKTKAP 170

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P23444|H1_MAIZE (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 2.100e-16
Identity = 60/128 (46.88%), Postives = 68/128 (53.12%), Query Frame = 0

Query:   53 PTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHK-QLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKA 179
            PTH  Y EM+ +AITSLKE+TGSS YAIAKF+E+KHK +LPPNF+KLL   LKK VA GKL KVK S+KL  A      P    K                                 K K AAKPKA
Sbjct:   48 PTHLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLSSATKPNPKPKAAPKKPKT--------------------------GAKKPKAAAKPKA 149

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P54671|H1_DICDI (Histone H1 OS=Dictyostelium discoideum OX=44689 GN=H1 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 1.270e-13
Identity = 34/69 (49.28%), Postives = 42/69 (60.87%), Query Frame = 0

Query:   53 PTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKL 121
            P HP+Y+ MI  AI   K++TGSSQ AI K+IE  +   P  FK  L   LK+ VA G L  VK S+KL
Sbjct:   22 PNHPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVAPDTFKTQLKLALKRLVAKGTLTMVKASYKL 90

[Close]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P02259|H5_CHICK (Histone H5 OS=Gallus gallus OX=9031 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 7.762e-12
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 0

Query:   42 KPKKVSRPRNPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKL-----VKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPK----PAAKPKPAAKTAKAKAPA 169
            KPK+V   R   +HP+Y EMI  AI + K + GSS+ +I K+I+  H ++  N    +   +++ +AAG L     V   GSF+L  +  +  SP KKKK       PK   +P+    PA KPK  A+ A+ K+ A
Sbjct:   13 KPKRVKASRRSASHPTYSEMIAAAIRAEKSRGGSSRQSIQKYIKS-HYKVGHNADLQIKLSIRRLLAAGVLKQTKGVGASGSFRLAKSDKAKRSPGKKKKAVRRSTSPKKAARPRKARSPAKKPKATARKARKKSRA 148

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-13046267 FORWARD LENGTH=273)

HSP 1 Score: 147.132 bits (370), Expect = 2.315e-42
Identity = 129/239 (53.97%), Postives = 149/239 (62.34%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSAS----SPAKKKKPAAAKPKPKPKPKPKPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPAAAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKR 288
            +HP+YEEMIKDAI +LKE+TGSSQYAI KFIEEKHK LPP F+KLLL +LK+ VA+ KLVKVK SFK+P A+ +A+    +P KKK    AKPK K                 A A APAKAK AAK   K  AK    AK     K K  AAKPK+ +        AA     A     K K +P KA+RTSTRTSPGKK  A  PA KKVA  KKAP KSVK   VKSPAK+AST++
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKV----------------AAAVAPAKAKAAAKGTKKPAAKVVAKAKVTAKPKAKVTAAKPKSKS-------VAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKVAA--PA-KKVAVTKKAPAKSVK---VKSPAKRASTRK 270

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: H1.2, HON2 | Histone 1.2 | chr2:13045360-13046267 FORWARD LENGTH=202)

HSP 1 Score: 130.568 bits (327), Expect = 8.512e-37
Identity = 62/94 (65.96%), Postives = 75/94 (79.79%), Query Frame = 0

Query:   54 THPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSAS----SPAKKKKPAAAKPK 143
            +HP+YEEMIKDAI +LKE+TGSSQYAI KFIEEKHK LPP F+KLLL +LK+ VA+ KLVKVK SFK+P A+ +A+    +P KKK    AKPK
Sbjct:   61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPKPAAPVKKKATVVAKPK 154

HSP 2 Score: 52.7582 bits (125), Expect = 5.261e-8
Identity = 51/83 (61.45%), Postives = 57/83 (68.67%), Query Frame = 0

Query:  207 TAKPAAKPKPAA-AKPKAAAKPAAKPKAKPVKAARTSTRTSPGKKAPAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKR 288
            +A+ AA PKPAA  K KA     AKPKA     +RTSTRTSPGKK  A  PA KKVA  KKAP KSVK   VKSPAK+AST++
Sbjct:  130 SARSAATPKPAAPVKKKATV--VAKPKA-----SRTSTRTSPGKKVAA--PA-KKVAVTKKAPAKSVK---VKSPAKRASTRK 199

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: HON3, HIS1-3 | histone H1-3 | chr2:7846095-7846670 FORWARD LENGTH=167)

HSP 1 Score: 83.5741 bits (205), Expect = 2.203e-19
Identity = 46/80 (57.50%), Postives = 55/80 (68.75%), Query Frame = 0

Query:   48 RPRNP--PTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPA 124
            +PR P   THP Y +MIK+A+  LKEK GSS YAIAK IEEKHK  LP +F+K L   LK  VA GKLVK++ S+KL   
Sbjct:   15 KPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDT 94

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: HON3, HIS1-3 | histone H1-3 | chr2:7846254-7846670 FORWARD LENGTH=138)

HSP 1 Score: 74.7146 bits (182), Expect = 2.188e-16
Identity = 45/99 (45.45%), Postives = 57/99 (57.58%), Query Frame = 0

Query:   61 MIKDAITSLKEKTGSSQYAIAKFIEEKHKQ-LPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPKPAAKPKP 158
            MIK+A+  LKEK GSS YAIAK IEEKHK  LP +F+K L   LK  VA GKLVK++ S+KL       +    KK     K + K   K   ++  +P
Sbjct:    1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRP 99

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: HMGA | high mobility group A | chr1:5138665-5139353 REVERSE LENGTH=204)

HSP 1 Score: 61.6178 bits (148), Expect = 4.527e-11
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 0

Query:   56 PSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSF 119
            P Y +MI +AI SL +K G ++  IAK IE   + LPP+   LL +HL +    G+L+ VK ++
Sbjct:   24 PPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQLIMVKNNY 87

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: HON5 | high mobility group A5 | chr1:17974148-17976301 REVERSE LENGTH=479)

HSP 1 Score: 55.8398 bits (133), Expect = 1.342e-8
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0

Query:   58 YEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKL 121
            Y +MI  AI +L E  GSS+ AI+++IE  +  +P     LL  HLK    +G LV VK S+KL
Sbjct:   78 YSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILVMVKKSYKL 141

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: ATTRB1, TRB1 | TELOMERE REPEAT BINDING FACTOR 1, telomere repeat binding factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300)

HSP 1 Score: 55.4546 bits (132), Expect = 1.507e-8
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0

Query:   59 EEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPK 151
            + +I +AI +LKE  G ++  I  +IE+++   PP+FK+LL   LK   + GKLVKVK  +++P + P +S   K       K +    P PK
Sbjct:  122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPK 213

[Close]

Query:   59 EEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPK 151
            + +I +AI +LKE  G ++  I  +IE+++   PP+FK+LL   LK   + GKLVKVK  +++P + P +S   K       K +    P PK
Sbjct:  122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPK 213

[Close]

Query:   59 EEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKPK 151
            + +I +AI +LKE  G ++  I  +IE+++   PP+FK+LL   LK   + GKLVKVK  +++P + P +S   K       K +    P PK
Sbjct:  122 DSLIMEAIATLKEPGGCNKTTIGAYIEDQYHA-PPDFKRLLSTKLKYLTSCGKLVKVKRKYRIPNSTPLSSHRRKGLGVFGGKQRTSSLPSPK 213

[Close]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Match: | (Symbols: HON4 | | chr3:6169384-6171558 REVERSE LENGTH=480)

HSP 1 Score: 54.299 bits (129), Expect = 5.182e-8
Identity = 29/67 (43.28%), Postives = 38/67 (56.72%), Query Frame = 0

Query:   55 HPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLLFHLKKQVAAGKLVKVKGSFKL 121
            HP Y EMI  AI +L E  GSS+ AI+++IE  +  L      LL  HLK    +G L  VK S+K+
Sbjct:   65 HPPYSEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSMVKKSYKI 131

The following BLAST results are available for this feature:

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
BLAST of Cc_v2.0_03528.1 vs. Araport11

BLAST of Cc_v2.0_03528.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A2K3LZD3\|A0A2K3LZD3_TRIPR	1.728e-58	59.68	Histone H1 (Fragment) OS=Trifolium pratense OX=575...	[more]
tr\|A0A2K3KDQ2\|A0A2K3KDQ2_TRIPR	1.044e-57	59.29	Histone H1 (Fragment) OS=Trifolium pratense OX=575...	[more]
tr\|A0A0A8KXA9\|A0A0A8KXA9_9FABA	5.509e-57	59.80	His5 protein OS=Vavilovia formosa OX=512756 GN=his...	[more]
tr\|A0A2K3LH43\|A0A2K3LH43_TRIPR	2.253e-54	55.02	Histone H1 (Fragment) OS=Trifolium pratense OX=575...	[more]
tr\|A0A6A3AM43\|A0A6A3AM43_HIBSY	5.470e-54	61.22	Histone H1.2 OS=Hibiscus syriacus OX=106335 GN=F3Y...	[more]
tr\|A0A7J6UWN5\|A0A7J6UWN5_THATH	2.886e-52	53.45	Histone h1 OS=Thalictrum thalictroides OX=46969 GN...	[more]
tr\|A0A1S2XVI6\|A0A1S2XVI6_CICAR	7.070e-51	56.27	Histone H1 OS=Cicer arietinum OX=3827 GN=LOC101510...	[more]
tr\|A0A8B8MF20\|A0A8B8MF20_ABRPR	1.263e-49	78.51	Histone H1-like OS=Abrus precatorius OX=3816 GN=LO...	[more]
tr\|A0A2K3NQY8\|A0A2K3NQY8_TRIPR	8.799e-49	55.09	Histone H1 (Fragment) OS=Trifolium pratense OX=575...	[more]
tr\|A0A8A4XFC6\|A0A8A4XFC6_PEA	4.492e-48	55.78	Histone H1 subtype 5 OS=Pisum sativum subsp. elati...	[more]

BLAST of Cc_v2.0_03528.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10


Match Name	E-value	Identity	Description
sp\|P26569\|H12_ARATH	2.232e-41	53.97	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At...	[more]
sp\|P08283\|H1_PEA	1.772e-36	67.97	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
sp\|P37218\|H1_SOLLC	3.596e-22	58.54	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV...	[more]
sp\|Q9M5W4\|H1_EUPES	7.271e-21	57.14	Histone H1 OS=Euphorbia esula OX=3993 PE=2 SV=1	[more]
sp\|P40267\|H1_SOLPN	5.912e-20	55.56	Histone H1 OS=Solanum pennellii OX=28526 PE=2 SV=1	[more]
sp\|P27806\|H1_WHEAT	1.238e-17	43.41	Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2	[more]
sp\|Q08864\|H11_VOLCA	5.797e-17	52.99	Histone H1-I OS=Volvox carteri OX=3067 GN=H1-I PE=...	[more]
sp\|P23444\|H1_MAIZE	2.100e-16	46.88	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]
sp\|P54671\|H1_DICDI	1.270e-13	49.28	Histone H1 OS=Dictyostelium discoideum OX=44689 GN...	[more]
sp\|P02259\|H5_CHICK	7.762e-12	35.77	Histone H5 OS=Gallus gallus OX=9031 PE=1 SV=2	[more]

BLAST of Cc_v2.0_03528.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	2.315e-42	53.97	Symbols: H1.2, HON2 \| Histone 1.2 \| chr2:13045360-...	[more]
\|	8.512e-37	65.96	Symbols: H1.2, HON2 \| Histone 1.2 \| chr2:13045360-...	[more]
\|	2.203e-19	57.50	Symbols: HON3, HIS1-3 \| histone H1-3 \| chr2:784609...	[more]
\|	2.188e-16	45.45	Symbols: HON3, HIS1-3 \| histone H1-3 \| chr2:784625...	[more]
\|	4.527e-11	40.63	Symbols: HMGA \| high mobility group A \| chr1:51386...	[more]
\|	1.342e-8	43.75	Symbols: HON5 \| high mobility group A5 \| chr1:1797...	[more]
\|	1.507e-8	35.48	Symbols: ATTRB1, TRB1 \| TELOMERE REPEAT BINDING FA...	[more]
\|	1.507e-8	35.48	Symbols: ATTRB1, TRB1 \| TELOMERE REPEAT BINDING FA...	[more]
\|	1.507e-8	35.48	Symbols: ATTRB1, TRB1 \| TELOMERE REPEAT BINDING FA...	[more]
\|	5.182e-8	43.28	Symbols: HON4 \| \| chr3:6169384-6171558 REVERSE LE...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 145..159 score: 51.11 coord: 202..221 score: 27.22 coord: 41..62 score: 41.41 coord: 180..197 score: 35.8 coord: 68..85 score: 37.65
None	No IPR available	FUNFAM	G3DSA:1.10.10.10:FF:000521		coord: 49..134 e-value: 6.2E-45 score: 153.0
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 25..235
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 50..129 e-value: 3.5E-23 score: 83.5
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 55..121 e-value: 9.0E-17 score: 72.4
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 54..123 score: 33.343487
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 52..121 e-value: 9.18003E-18 score: 74.5799
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 51..135

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CcLG02_v2.0:27515125..27517402-
coding sequence from alignment at CcLG02_v2.0:27515125..27517402-

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_03528.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03528.1; Name=Cc_v2.0_03528.1; organism=Cajanus cajan; type=mRNA; length=879bp
ATGGCCACAGAAGAGCCCACTGTCGCTGTTGAACCCGCACCCGAGCCTGC
CACCACCGAGCCTCCTCTGGAGGAGAAGGAGGAGCCCAAACCTGAAGCCA
AGGCTAAGAAAACCAAGGAACCCAAACCTAAGAAGGTTTCCAGACCCCGC
AATCCTCCCACTCATCCTTCCTACGAAGAGATGATCAAAGATGCAATCAC
CTCACTGAAGGAGAAAACCGGTTCCAGCCAATACGCGATTGCCAAGTTCA
TTGAGGAGAAGCACAAACAGCTTCCACCGAACTTCAAGAAGCTTCTTCTC
TTCCACTTGAAGAAGCAAGTTGCTGCTGGGAAACTCGTCAAAGTCAAAGG
CTCCTTCAAGCTTCCGCCGGCCAAGCCTTCTGCTTCTTCTCCTGCGAAGA
AGAAGAAGCCTGCAGCTGccaagccaaagccaaagccaaagcccaagccc
aagcccgctgctaagcccaagcctgccgctaagacagctaaagccaaagc
cccagccaaggccaagccagctgccaagcccaaagccaaggctcctgcca
agccaaagcccgctgccaaggccaagccagctgcaaagcccaagcctgcc
gctgctaagcccaagaccaccgccaagcctgctgccaaacccaagcctgc
cgctgccaagcccaaagccgccgccaaacctgctgccaagcccaaggcca
agcccGTTAAGGCTGCAAGGACGTCGACGAGGACTTCACCGGGGAAGAAA
GCCCCAGCTGCCAAGCCCGCACCAAAGAAGGTAGCAGCGGCGAAGAAAGC
TCCAGTGAAGAGTGTGAAACCCAAGAGTGTAAAGTCTCCGGCGAAAAAGG
CATCGACTAAGAGAGGGGGTAGGAAGTGA

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_03528.1

>drCajCajn.Asha.2.0.Cc_v2.0_03528.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03528.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_03528.1; organism=Cajanus cajan; type=polypeptide; length=292bp
MATEEPTVAVEPAPEPATTEPPLEEKEEPKPEAKAKKTKEPKPKKVSRPR
NPPTHPSYEEMIKDAITSLKEKTGSSQYAIAKFIEEKHKQLPPNFKKLLL
FHLKKQVAAGKLVKVKGSFKLPPAKPSASSPAKKKKPAAAKPKPKPKPKP
KPAAKPKPAAKTAKAKAPAKAKPAAKPKAKAPAKPKPAAKAKPAAKPKPA
AAKPKTTAKPAAKPKPAAAKPKAAAKPAAKPKAKPVKAARTSTRTSPGKK
APAAKPAPKKVAAAKKAPVKSVKPKSVKSPAKKASTKRGGRK

mRNA from alignment at CcLG02_v2.0:27515125..27517402-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCajCajn.Asha.2.0.Cc_v2.0_03528.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03528.1; Name=Cc_v2.0_03528.1; organism=Cajanus cajan; type=mRNA; length=2278bp; location=Sequence derived from: CcLG02_v2.0:27515125..27517402- (Cajanus cajan
AAATTCTCTCATCTTCTCTCACACCCAATTTCCAATTACCAATTCAATCT
CCAGTTTCAACGTCCCTAACACACAGATCCCAATCCCTTTCCTCACTTCA
AGCCCTAACCCTAGCCGTTCCCATGGCCACAGAAGAGCCCACTGTCGCTG
TTGAACCCGCACCCGAGCCTGCCACCACCGAGCCTCCTCTGGAGGAGAAG
GAGGAGCCCAAACCTGAAGCCAAGGCTAAGAAAACCAAGGAACCCAAACC
TAAGAAGGTTTCCAGACCCCGCAATCCTCCCACTCATCCTTCCTACGAAG
AGGTTCGATCTGAAACACCTTTTTCCACCTAATTCTCTTTCCAATTGTGC
TTATCGAATTAGATCTGATTTCAATTTTGTTTTTGCTTGTTTAACAGATG
ATCAAAGATGCAATCACCTCACTGAAGGAGAAAACCGGTTCCAGCCAATA
CGCGATTGCCAAGTTCATTGAGGAGAAGCACAAACAGCTTCCACCGAACT
TCAAGAAGCTTCTTCTCTTCCACTTGAAGAAGCAAGTTGCTGCTGGGAAA
CTCGTCAAAGTCAAAGGCTCCTTCAAGCTTCCGCCGGCCAAGCCTTCTGC
TTCTTCTCCTGCGAAGAAGAAGAAGCCTGCAGCTGCCAAGCCAAAGCCAA
AGCCAAAGCCCAAGCCCAAGCCCGCTGCTAAGCCCAAGCCTGCCGCTAAG
ACAGCTAAAGCCAAAGCCCCAGCCAAGGCCAAGCCAGCTGCCAAGCCCAA
AGCCAAGGCTCCTGCCAAGCCAAAGCCCGCTGCCAAGGCCAAGCCAGCTG
CAAAGCCCAAGCCTGCCGCTGCTAAGCCCAAGACCACCGCCAAGCCTGCT
GCCAAACCCAAGCCTGCCGCTGCCAAGCCCAAAGCCGCCGCCAAACCTGC
TGCCAAGCCCAAGGCCAAGCCCGTTAAGGCTGCAAGGACGTCGACGAGGA
CTTCACCGGGGAAGAAAGCCCCAGCTGCCAAGCCCGCACCAAAGAAGGTA
GCAGCGGCGAAGAAAGCTCCAGTGAAGAGTGTGAAACCCAAGAGTGTAAA
GTCTCCGGCGAAAAAGGCATCGACTAAGAGAGGGGGTAGGAAGTGAGAGA
GTGGTCGCTAGTGTTGTTTTAGGGTTAGTGTTGTGAAGTTCATTGTCCTT
TTGGTGTAGTTGGGGTTACAGATGTTCTTATAACATATGAAATCGGATTT
TATGAAATCTTTGTTGTTTATTTTAGTTTGATTTTTTTTTTTCTGGTTCG
ATCTAGGGAGTAGATAAAAAAAAAAAGCTTATAGCTCGTGCTTTAAAGCT
AAATGAGTTAATCATAAATGTATCTTAGAGTTTGAGGTTTCTCAGCGTTA
TAGTATCTTCAATCCATGGATGTAGTATAAGCGCCTTTTGTCACATCAAA
TGGATTTGTAGTATATGCTTTGTGTATGAAGCTTTGCCTTGAGTGCTGAG
GTGTTTTTCAGATCCTGATAATCATGACTTGATACAACTGCAAGTGCTTT
ATTGGCCATTTCGATAAAATTGATTAGTAGTTTAATTGAATGTATTTGTA
TGCATCTCAAATTCTTGACTTTACTTCATTACTTCAGTCCTATAATTTTT
ATAAATTTCAATGCATCCTGGATGCTTGAATGGATGTTATGAGTGGCGTT
TGTTGTCATTTGTGTTGACTGAACAATGGAATTATTGTGTTTTCTTTATA
AAAGTGACTGCATATTGCTGTAGCTTAGTGTAATAACCAGTATGAAGTTT
GTATAATTTTGGACATAGATTTATCTTAAGAAATATGTGGCAAGGGGATT
GGGTACTATTGACTTTCATGTGTTTGCAGTAACCATCAAGTGGAATGACT
GCAGTGATGAGGAATAATGTAAAGATGGTTGACAATAATAAAAACTACCC
TTATCCTATTGCTTTGGTATGACTGCTTAGACTTGGGTGTGGGAAGTTAT
AGATAGTATGTGGTGAACTGTCTTTTATGCAAAAAGGAAAAGGAAAATTT
AGTATCAAGCATACAAAGATGAGTCTGAAAGGAATGTGCAAATGATTGAT
GTTTCTGTTCATATTTCTATTAGTTGTTAGGTTGTGTAACATTAGTTGGT
TGTGCTTCTTTCTGTGTTTCAGTATATAGCAGAGATGGTTGAAGAGTTTT
GTTACTATGGGGGTTGATGAAACATCTACCGCTGATGGTTTCAAACATTC
AGTGTAATCGGCAACTGTTGTGACTTGGAGGTTTGTTCAGAATTTTGGTT
CCTTCCTTTAAATGATTTTGAAGACAGG

Coding sequence (CDS) from alignment at CcLG02_v2.0:27515125..27517402-

>drCajCajn.Asha.2.0.Cc_v2.0_03528.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03528.1; Name=Cc_v2.0_03528.1; organism=Cajanus cajan; type=CDS; length=879bp; location=Sequence derived from: CcLG02_v2.0:27515125..27517402- (Cajanus cajan
ATGGCCACAGAAGAGCCCACTGTCGCTGTTGAACCCGCACCCGAGCCTGC
CACCACCGAGCCTCCTCTGGAGGAGAAGGAGGAGCCCAAACCTGAAGCCA
AGGCTAAGAAAACCAAGGAACCCAAACCTAAGAAGGTTTCCAGACCCCGC
AATCCTCCCACTCATCCTTCCTACGAAGAGATGATCAAAGATGCAATCAC
CTCACTGAAGGAGAAAACCGGTTCCAGCCAATACGCGATTGCCAAGTTCA
TTGAGGAGAAGCACAAACAGCTTCCACCGAACTTCAAGAAGCTTCTTCTC
TTCCACTTGAAGAAGCAAGTTGCTGCTGGGAAACTCGTCAAAGTCAAAGG
CTCCTTCAAGCTTCCGCCGGCCAAGCCTTCTGCTTCTTCTCCTGCGAAGA
AGAAGAAGCCTGCAGCTGCCAAGCCAAAGCCAAAGCCAAAGCCCAAGCCC
AAGCCCGCTGCTAAGCCCAAGCCTGCCGCTAAGACAGCTAAAGCCAAAGC
CCCAGCCAAGGCCAAGCCAGCTGCCAAGCCCAAAGCCAAGGCTCCTGCCA
AGCCAAAGCCCGCTGCCAAGGCCAAGCCAGCTGCAAAGCCCAAGCCTGCC
GCTGCTAAGCCCAAGACCACCGCCAAGCCTGCTGCCAAACCCAAGCCTGC
CGCTGCCAAGCCCAAAGCCGCCGCCAAACCTGCTGCCAAGCCCAAGGCCA
AGCCCGTTAAGGCTGCAAGGACGTCGACGAGGACTTCACCGGGGAAGAAA
GCCCCAGCTGCCAAGCCCGCACCAAAGAAGGTAGCAGCGGCGAAGAAAGC
TCCAGTGAAGAGTGTGAAACCCAAGAGTGTAAAGTCTCCGGCGAAAAAGG
CATCGACTAAGAGAGGGGGTAGGAAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	H1/H5
IPR036388	WH-like_DNA-bd_sf
IPR005818	Histone_H1/H5_H15
IPR036390	WH_DNA-bd_sf

Vocabulary: **Cellular Component**
Term	Definition
GO:0000786	nucleosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0030527	structural constituent of chromatin

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Search form

Cc_v2.0_03528.1