Cc_v2.0_03875.1

Transcript Overview
NameCc_v2.0_03875.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_03875.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length564
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG02_v2.0chromosomeCcLG02_v2.0:32589166..32590225 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL242Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0393Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0399Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL325Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL443Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0641Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0809Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1063Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL165Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR229Pisum sativum Cameor genome v1aPisum sativum
ccapsR279Pisum sativum Cameor genome v1aPisum sativum
carccaL259Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR213Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR246Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR261Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR235Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR264Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR317Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR251Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR268Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR271Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL569Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavuR183Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR224Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR252Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR222Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR292Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0955Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR162Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR248Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR194Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR316Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vfaba.Hedin2.R1.3g091160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigun07g138600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g138600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-TanjilR_07420Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_17620Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_014657193.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat6g153000.1Pisum sativum Cameor genome v1aPisum sativum
jg20062.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg3000.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun01g209000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va01G096790.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_15633Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_27046Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_02718Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Phvul.007G202200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun01g209000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vum_01G03855.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.001G224600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_04G02869.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.Ca_v2.0_19900Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-XM_014640110.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_08G01438.1Vigna umbellata FF25 genome v1.0Vigna umbellata
evm.Ca_v2.0_09016Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_03875drCajCajn.Asha.2.0.Cc_v2.0_03875Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_03875.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_03875.1.exon1Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_03875.1.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_03875.1.utr3p1Cajanus cajanthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_03875.1drCajCajn.Asha.2.0.cds.Cc_v2.0_03875.1Cajanus cajanCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_03875.1.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_03875.1.utr5p1Cajanus cajanfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_03875.1drCajCajn.Asha.2.0.Cc_v2.0_03875.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_03875.1drCajCajn.Asha.2.0.Cc_v2.0_03875.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86W4J2|A0AA86W4J2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS30026 PE=4 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 3.259e-106
Identity = 164/196 (83.67%), Postives = 172/196 (87.76%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRIA-GERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAAL 186
            MASF   +DS+NS T RESN KKRRKIG+HA       AVPWRS+AE RIYSRRLVEALRRTPSS AKPRAAGQVR+TADRVLAATARGRTRWSRAILGRWRKLRTQHKK KKASS GLKRTRI+ GERRNRL AVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVRAMT LAELL+G APAG+ G AL
Sbjct:    1 MASFEPNVDSSNSETSRESNQKKRRKIGDHATDNNSANAVPWRSEAEQRIYSRRLVEALRRTPSSQAKPRAAGQVRETADRVLAATARGRTRWSRAILGRWRKLRTQHKKAKKASSTGLKRTRISCGERRNRLAAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLSGGAPAGLDGGAL 196
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7BGI6|V7BGI6_PHAVU (BHLH domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_007G202200g PE=4 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 1.283e-105
Identity = 164/197 (83.25%), Postives = 170/197 (86.29%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRI-AGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            M SF   +DS+NS TLRESN KKRRKIG+HAA      AVPWRSDAE RIYSRRLVEALRRTPSS AKPRAAGQVR+ ADRVLAATARGRTRWSRAIL RWRKLRT HKK KK SS GLKRTRI  GERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVR MT LAELL+G APAG+ G ALS
Sbjct:    1 MESFEPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSDAEQRIYSRRLVEALRRTPSSAAKPRAAGQVREAADRVLAATARGRTRWSRAILRRWRKLRTPHKKAKKTSSTGLKRTRINGGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGIDGGALS 197
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6N568|A0A4D6N568_VIGUN (Myc-type OS=Vigna unguiculata OX=3917 GN=DEO72_LG9g2272 PE=4 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 1.968e-105
Identity = 159/190 (83.68%), Postives = 169/190 (88.95%), Query Frame = 0 
Query:    5 LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRI-AGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            +DS+NS TLRESN KKRRKIG+HAA      A+PWRS+AE RIYSRRLVEALRRTPSS AKPRAAGQVR+TADRVLAA+ARGRTRWSRAILGRWRKLRTQHKK K+ SS GLKRTRI  GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVR MT LAELL+G APAG+ G ALS
Sbjct:    8 VDSSNSETLRESNQKKRRKIGDHAADHNSANAIPWRSEAEQRIYSRRLVEALRRTPSSAAKPRAAGQVRETADRVLAASARGRTRWSRAILGRWRKLRTQHKKAKRTSSTGLKRTRINGGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGLDGGALS 197
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SQN9|A0A0S3SQN9_PHAAN (BHLH domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G180000 PE=4 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 5.336e-105
Identity = 161/197 (81.73%), Postives = 171/197 (86.80%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRI-AGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            M SF   +DS+NS TLRESN KKRRKIG+HAA      AVPWRS+AE RIYSRRLVEALRRTPSS A+P AAGQV +TADR+LAATARGRTRWSRAILGRWRKLRTQHKK KK SS GLKRTRI +GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVR MT LAELL+G APAG+ G ALS
Sbjct:    1 MESFEPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSEAEQRIYSRRLVEALRRTPSSVARPAAAGQVHETADRILAATARGRTRWSRAILGRWRKLRTQHKKAKKTSSTGLKRTRINSGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGIDGGALS 197
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9TY15|A0A0L9TY15_PHAAN (Transcription factor bHLH149 ATBS1 interacting factor 4 Basic helix-loop-helix protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0235920 PE=4 SV=1)

HSP 1 Score: 309.301 bits (791), Expect = 5.336e-105
Identity = 161/197 (81.73%), Postives = 171/197 (86.80%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRI-AGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            M SF   +DS+NS TLRESN KKRRKIG+HAA      AVPWRS+AE RIYSRRLVEALRRTPSS A+P AAGQV +TADR+LAATARGRTRWSRAILGRWRKLRTQHKK KK SS GLKRTRI +GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVR MT LAELL+G APAG+ G ALS
Sbjct:    1 MESFEPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSEAEQRIYSRRLVEALRRTPSSVARPAAAGQVHETADRILAATARGRTRWSRAILGRWRKLRTQHKKAKKTSSTGLKRTRINSGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGIDGGALS 197
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3V3F6|A0A1S3V3F6_VIGRR (Transcription factor bHLH149 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771244 PE=4 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.058e-99
Identity = 153/184 (83.15%), Postives = 161/184 (87.50%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRI-AGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA 174
            M SF   +DS+NS TLRESN KKRRKIG+HAA      AVPWRS+AE RIYSRRLVEALRRTPSS A+P AAGQVR+TADR+LAATARGRTRWSRAILGRWRKLRTQHKK KK SS GLKRTRI  GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVR MT LAELL+
Sbjct:    1 MESFQPNVDSSNSETLRESNQKKRRKIGDHAADHNSANAVPWRSEAEQRIYSRRLVEALRRTPSSVARPSAAGQVRETADRILAATARGRTRWSRAILGRWRKLRTQHKKAKKTSSTGLKRTRINGGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLS 184
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445IML1|A0A445IML1_GLYSO (Transcription factor bHLH149 OS=Glycine soja OX=3848 GN=D0Y65_027088 PE=4 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 2.004e-97
Identity = 168/199 (84.42%), Postives = 174/199 (87.44%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA-------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASS-NGLKRTRIA-GERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            MASF   +DS+NS TLRESNHKKRRKIG+HAA       AVPWRSD E RIYSRRLVEALRRTPSS  KPRAAGQVR+TADRVLAATARGRTRWSRAIL RWRKLR QHKK K ASS NGLKRTRI  GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVRAMT LAELLAGAAPA +AG+ALS
Sbjct:    1 MASFDPNVDSSNSDTLRESNHKKRRKIGDHAAGDLDFAAAVPWRSDVEQRIYSRRLVEALRRTPSSATKPRAAGQVRETADRVLAATARGRTRWSRAILKRWRKLRMQHKKAKAASSNNGLKRTRIGNGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGAAPANLAGSALS 199
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1LB36|I1LB36_SOYBN (BHLH domain-containing protein OS=Glycine max OX=3847 GN=100783462 PE=4 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 2.004e-97
Identity = 168/199 (84.42%), Postives = 174/199 (87.44%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAA-------AVPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASS-NGLKRTRIA-GERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            MASF   +DS+NS TLRESNHKKRRKIG+HAA       AVPWRSD E RIYSRRLVEALRRTPSS  KPRAAGQVR+TADRVLAATARGRTRWSRAIL RWRKLR QHKK K ASS NGLKRTRI  GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVRAMT LAELLAGAAPA +AG+ALS
Sbjct:    1 MASFDPNVDSSNSDTLRESNHKKRRKIGDHAAGDLDFAAAVPWRSDVEQRIYSRRLVEALRRTPSSATKPRAAGQVRETADRVLAATARGRTRWSRAILKRWRKLRMQHKKAKAASSNNGLKRTRIGNGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGAAPANLAGSALS 199
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8MED5|A0A8B8MED5_ABRPR (Transcription factor bHLH149 OS=Abrus precatorius OX=3816 GN=LOC113873135 PE=4 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 2.506e-92
Identity = 144/187 (77.01%), Postives = 160/187 (85.56%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAAA------VPWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAP 178
            MASF   +DS+NS TLRESNHKKR+KIG+ A        +PW S+ E RIYSRRLVEALRRT SS  KPRAAGQVR+TADRVLAATA+GRTRWSRAIL RW+KL+ QHKKVKK S+ GLKRT I GERR+RLPAVQKKARVL RLVPGCRKVSFPNLLEEA+DYISALEMQVRAMT LAE+L+G+AP
Sbjct:    1 MASFQPNIDSSNSDTLRESNHKKRKKIGDPAGERNSLNLIPWSSEVEQRIYSRRLVEALRRTTSSATKPRAAGQVRETADRVLAATAKGRTRWSRAILRRWKKLQRQHKKVKKVSA-GLKRTGIGGERRSRLPAVQKKARVLSRLVPGCRKVSFPNLLEEASDYISALEMQVRAMTALAEILSGSAP 186
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445F2V9|A0A445F2V9_GLYSO (Transcription factor bHLH149 OS=Glycine soja OX=3848 GN=D0Y65_053650 PE=4 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 3.602e-88
Identity = 162/201 (80.60%), Postives = 170/201 (84.58%), Query Frame = 0 
Query:    1 MASF---LDSTNSHTLRESNHKKRRKIGEHAAAV-------PWRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQH---KKVKKASSNGLKRTRIA-GERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS 187
            MASF   +DS+NS TLRESNHKKRRKIG+HAAA        PWRS+ E RIYSRRLVEALRRT SS AKPRAAGQVR+TADRVLAATARGRTRWSRAIL RWRKLRTQH   KK + +S N LKRTRI  GERRNRLPAVQKKARVL RLVPGCRKVSFPNLLEEATDYISALEMQVRAMT LAELLAGAAPA +AG  LS
Sbjct:    1 MASFDPSVDSSNSDTLRESNHKKRRKIGDHAAADQNSAAASPWRSEEEQRIYSRRLVEALRRTASSAAKPRAAGQVRETADRVLAATARGRTRWSRAILSRWRKLRTQHKKAKKKEASSINCLKRTRIGNGERRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGAAPASLAGGTLS 201
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O80482|BH149_ARATH (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.234e-38
Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 0 
Query:   15 ESNHKKRRKIGEHAAAVP------------WRSDAEHRIYSRRLVEALRR------TPSSPAKPR----AAGQVRDTADRVLAATARGRTRWSRAILG-RWRKLRTQHKKVKKASSNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAM 166
            ES+ +K+ +I E A A              W+++   +IY+ +LVEALRR      T S+    +    AA ++RDTADRVLAA+ARG TRWSRAIL  R R    +H+K KK++ N   R  +    R +LPAV++K ++LGRLVPGCRKVS PNLL+EATDYI+ALEMQVRAM
Sbjct:   14 ESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAM 188
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M9L6|BH150_ARATH (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.093e-31
Identity = 73/156 (46.79%), Postives = 98/156 (62.82%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAIL-GRWRKLRTQHKKVKKASS-NGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAAL 186
            WR+    ++YS +L +AL+R+       R +  VRDTAD+VLA TARG TRWSRAIL  R+     + +  K AS+     R      RR +L AV  + RVLG LVPGCR+ + P LL+E  DYI+ALEMQVRAMT L+++L+   P+   G+AL
Sbjct:   63 WRATTAQKVYSLKLYDALQRS-------RRSATVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTNLGSAL 211
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LSN7|BH147_ARATH (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.888e-30
Identity = 72/158 (45.57%), Postives = 94/158 (59.49%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRR--------TPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRIAGERRNR-------------LPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTL 169
            WRS+ + +IYS +LV ALR         + SS + PR    VR+ ADR LA  ARG+T WSRAIL +  KL+ +  K ++  SN    T   G  R++             LPAVQ+K +VL RLVPGCRK S P +LEE TDYI+A+EMQ+R MT +
Sbjct:   50 WRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
[Close]
BLAST of Cc_v2.0_03875.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9C8Z9|BH148_ARATH (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.986e-30
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRT--------PSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKAS---------------SNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA--GAAPAGV 181
            WRS+ + RIYS +L +AL++          SSP   +    VR+ ADR LA +ARGRT WSRAIL    KL+ + ++  +A+                +  +R  +    +  +P V +K RVLGRLVPGC K S P +LEEATDYI ALEMQVRAM +L +LL+  G+AP  +
Sbjct:   48 WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAPPPI 221
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: AIF4 | ATBS1 Interacting Factor 4 | chr1:2989509-2990132 FORWARD LENGTH=207)

HSP 1 Score: 134.42 bits (337), Expect = 1.282e-39
Identity = 87/175 (49.71%), Postives = 114/175 (65.14%), Query Frame = 0 
Query:   15 ESNHKKRRKIGEHAAAVP------------WRSDAEHRIYSRRLVEALRR------TPSSPAKPR----AAGQVRDTADRVLAATARGRTRWSRAILG-RWRKLRTQHKKVKKASSNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAM 166
            ES+ +K+ +I E A A              W+++   +IY+ +LVEALRR      T S+    +    AA ++RDTADRVLAA+ARG TRWSRAIL  R R    +H+K KK++ N   R  +    R +LPAV++K ++LGRLVPGCRKVS PNLL+EATDYI+ALEMQVRAM
Sbjct:   14 ESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEALRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKKHRKAKKSTGNCKSRKGLTETNRIKLPAVERKLKILGRLVPGCRKVSVPNLLDEATDYIAALEMQVRAM 188
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: AIF1 | AtBS1(activation-tagged BRI1 suppressor 1)-interacting factor 1 | chr3:1727476-1728111 FORWARD LENGTH=211)

HSP 1 Score: 116.701 bits (291), Expect = 1.134e-32
Identity = 73/156 (46.79%), Postives = 98/156 (62.82%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAIL-GRWRKLRTQHKKVKKASS-NGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLAGAAPAGVAGAAL 186
            WR+    ++YS +L +AL+R+       R +  VRDTAD+VLA TARG TRWSRAIL  R+     + +  K AS+     R      RR +L AV  + RVLG LVPGCR+ + P LL+E  DYI+ALEMQVRAMT L+++L+   P+   G+AL
Sbjct:   63 WRATTAQKVYSLKLYDALQRS-------RRSATVRDTADKVLATTARGATRWSRAILVSRFGTSLRRRRNTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGCRRTALPELLDETADYIAALEMQVRAMTALSKILSELQPSTNLGSAL 211
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: AIF3 | ATBS1 Interacting Factor 3 | chr3:5831552-5832244 FORWARD LENGTH=230)

HSP 1 Score: 113.235 bits (282), Expect = 4.025e-31
Identity = 72/158 (45.57%), Postives = 94/158 (59.49%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRR--------TPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRIAGERRNR-------------LPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTL 169
            WRS+ + +IYS +LV ALR         + SS + PR    VR+ ADR LA  ARG+T WSRAIL +  KL+ +  K ++  SN    T   G  R++             LPAVQ+K +VL RLVPGCRK S P +LEE TDYI+A+EMQ+R MT +
Sbjct:   50 WRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: AIF3 | ATBS1 Interacting Factor 3 | chr3:5831552-5832244 FORWARD LENGTH=230)

HSP 1 Score: 113.235 bits (282), Expect = 4.025e-31
Identity = 72/158 (45.57%), Postives = 94/158 (59.49%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRR--------TPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKASSNGLKRTRIAGERRNR-------------LPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTL 169
            WRS+ + +IYS +LV ALR         + SS + PR    VR+ ADR LA  ARG+T WSRAIL +  KL+ +  K ++  SN    T   G  R++             LPAVQ+K +VL RLVPGCRK S P +LEE TDYI+A+EMQ+R MT +
Sbjct:   50 WRSEKQQQIYSTKLVHALRELRISQQPSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHK-RQRISNPTTTTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAAMEMQIRTMTAI 206
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2, RSA1 interacting transcription factor 1 | chr3:2054647-2055312 REVERSE LENGTH=221)

HSP 1 Score: 112.464 bits (280), Expect = 7.235e-31
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRT--------PSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKAS---------------SNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA--GAAPAGV 181
            WRS+ + RIYS +L +AL++          SSP   +    VR+ ADR LA +ARGRT WSRAIL    KL+ + ++  +A+                +  +R  +    +  +P V +K RVLGRLVPGC K S P +LEEATDYI ALEMQVRAM +L +LL+  G+AP  +
Sbjct:   48 WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAPPPI 221
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2, RSA1 interacting transcription factor 1 | chr3:2054647-2055312 REVERSE LENGTH=221)

HSP 1 Score: 112.464 bits (280), Expect = 7.235e-31
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRT--------PSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKAS---------------SNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA--GAAPAGV 181
            WRS+ + RIYS +L +AL++          SSP   +    VR+ ADR LA +ARGRT WSRAIL    KL+ + ++  +A+                +  +R  +    +  +P V +K RVLGRLVPGC K S P +LEEATDYI ALEMQVRAM +L +LL+  G+AP  +
Sbjct:   48 WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAPPPI 221
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2, RSA1 interacting transcription factor 1 | chr3:2054647-2055312 REVERSE LENGTH=221)

HSP 1 Score: 112.464 bits (280), Expect = 7.235e-31
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRT--------PSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKAS---------------SNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA--GAAPAGV 181
            WRS+ + RIYS +L +AL++          SSP   +    VR+ ADR LA +ARGRT WSRAIL    KL+ + ++  +A+                +  +R  +    +  +P V +K RVLGRLVPGC K S P +LEEATDYI ALEMQVRAM +L +LL+  G+AP  +
Sbjct:   48 WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAPPPI 221
[Close]
BLAST of Cc_v2.0_03875.1 vs. Araport11
Match: | (Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2, RSA1 interacting transcription factor 1 | chr3:2054647-2055312 REVERSE LENGTH=221)

HSP 1 Score: 112.464 bits (280), Expect = 7.235e-31
Identity = 74/174 (42.53%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:   33 WRSDAEHRIYSRRLVEALRRT--------PSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHKKVKKAS---------------SNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTTLAELLA--GAAPAGV 181
            WRS+ + RIYS +L +AL++          SSP   +    VR+ ADR LA +ARGRT WSRAIL    KL+ + ++  +A+                +  +R  +    +  +P V +K RVLGRLVPGC K S P +LEEATDYI ALEMQVRAM +L +LL+  G+AP  +
Sbjct:   48 WRSEKQQRIYSAKLFQALQQVRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEATDYIQALEMQVRAMNSLVQLLSSYGSAPPPI 221
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_03875.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0AA86W4J2|A0AA86W4J2_9FABA3.259e-10683.67Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|V7BGI6|V7BGI6_PHAVU1.283e-10583.25BHLH domain-containing protein OS=Phaseolus vulgar... [more]
tr|A0A4D6N568|A0A4D6N568_VIGUN1.968e-10583.68Myc-type OS=Vigna unguiculata OX=3917 GN=DEO72_LG9... [more]
tr|A0A0S3SQN9|A0A0S3SQN9_PHAAN5.336e-10581.73BHLH domain-containing protein OS=Vigna angularis ... [more]
tr|A0A0L9TY15|A0A0L9TY15_PHAAN5.336e-10581.73Transcription factor bHLH149 ATBS1 interacting fac... [more]
tr|A0A1S3V3F6|A0A1S3V3F6_VIGRR6.058e-9983.15Transcription factor bHLH149 OS=Vigna radiata var.... [more]
tr|A0A445IML1|A0A445IML1_GLYSO2.004e-9784.42Transcription factor bHLH149 OS=Glycine soja OX=38... [more]
tr|I1LB36|I1LB36_SOYBN2.004e-9784.42BHLH domain-containing protein OS=Glycine max OX=3... [more]
tr|A0A8B8MED5|A0A8B8MED5_ABRPR2.506e-9277.01Transcription factor bHLH149 OS=Abrus precatorius ... [more]
tr|A0A445F2V9|A0A445F2V9_GLYSO3.602e-8880.60Transcription factor bHLH149 OS=Glycine soja OX=38... [more]
back to top
BLAST of Cc_v2.0_03875.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 4
Match NameE-valueIdentityDescription
sp|O80482|BH149_ARATH1.234e-3849.71Transcription factor bHLH149 OS=Arabidopsis thalia... [more]
sp|Q9M9L6|BH150_ARATH1.093e-3146.79Transcription factor bHLH150 OS=Arabidopsis thalia... [more]
sp|Q9LSN7|BH147_ARATH3.888e-3045.57Transcription factor bHLH147 OS=Arabidopsis thalia... [more]
sp|Q9C8Z9|BH148_ARATH6.986e-3042.53Transcription factor bHLH148 OS=Arabidopsis thalia... [more]
back to top
BLAST of Cc_v2.0_03875.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 8
Match NameE-valueIdentityDescription
|1.282e-3949.71Symbols: AIF4 | ATBS1 Interacting Factor 4 | chr1:... [more]
|1.134e-3246.79Symbols: AIF1 | AtBS1(activation-tagged BRI1 suppr... [more]
|4.025e-3145.57Symbols: AIF3 | ATBS1 Interacting Factor 3 | chr3:... [more]
|4.025e-3145.57Symbols: AIF3 | ATBS1 Interacting Factor 3 | chr3:... [more]
|7.235e-3142.53Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2,... [more]
|7.235e-3142.53Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2,... [more]
|7.235e-3142.53Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2,... [more]
|7.235e-3142.53Symbols: RITF1, AIF2 | ATBS1 Interacting Factor 2,... [more]
back to top
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044660Transcription factor IBH1-likePANTHERPTHR33124TRANSCRIPTION FACTOR IBH1-LIKE 1coord: 33..173
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 110..159
score: 9.34972
IPR044549Transcription factor IBH1-like, bHLH domainCDDcd11444bHLH_AtIBH1_likecoord: 118..170
e-value: 1.06695E-16
score: 68.8032
IPR036638Helix-loop-helix DNA-binding domain superfamilySUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 113..175

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_03875.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03875.1; Name=Cc_v2.0_03875.1; organism=Cajanus cajan; type=mRNA; length=564bp
ATGGCTTCCTTCCTAGATTCAACTAATTCACACACCCTGCGAGAATCCAA
CCACAAGAAGCGCCGCAAAATCGGAGAACACGCCGCCGCCGTCCCGTGGA
GATCCGACGCCGAGCACCGGATCTACTCGCGCCGCCTCGTCGAAGCACTC
CGCCGCACTCCCTCGTCTCCGGCAAAGCCTAGAGCCGCCGGCCAGGTCCG
CGATACCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCGGACGCGCT
GGAGCCGCGCGATCCTCGGCCGCTGGAGGAAGCTCCGGACGCAACACAAG
AAGGTCAAGAAGGCGTCGTCTAACGGATTGAAGAGAACGAGGATCGCCGG
CGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAGGCGCGCGTTCTCG
GCCGCTTGGTTCCCGGTTGCCGCAAGGTCTCGTTCCCGAACCTTCTCGAA
GAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCCATGAC
GACTCTCGCCGAACTACTCGCCGGCGCCGCGCCGGCCGGAGTCGCCGGCG
CCGCGTTGAGTTGA
back to top

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_03875.1

>drCajCajn.Asha.2.0.Cc_v2.0_03875.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03875.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_03875.1; organism=Cajanus cajan; type=polypeptide; length=187bp
MASFLDSTNSHTLRESNHKKRRKIGEHAAAVPWRSDAEHRIYSRRLVEAL
RRTPSSPAKPRAAGQVRDTADRVLAATARGRTRWSRAILGRWRKLRTQHK
KVKKASSNGLKRTRIAGERRNRLPAVQKKARVLGRLVPGCRKVSFPNLLE
EATDYISALEMQVRAMTTLAELLAGAAPAGVAGAALS
back to top

mRNA from alignment at CcLG02_v2.0:32589166..32590225-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_03875.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03875.1; Name=Cc_v2.0_03875.1; organism=Cajanus cajan; type=mRNA; length=1060bp; location=Sequence derived from: CcLG02_v2.0:32589166..32590225- (Cajanus cajan
GGAGGTAAAAGAAAAGAGTATGGCAATAAATAAGAGTAAGGAAAGGAGGC
GTGGTTCCCCGTGACTTGAACTCCTTTAATACTCTTTCATCTCTTCTTTT
TCTCTTCCCCTCACTTGGCACTTGGCACTTGGCATCCACCACCATCAACT
TCTTCTTCCTTCCTCCCTCTTTTTCTCTTATCCAATCACTCAATCGCAAT
TACCTATGGCTTCCTTCCTAGATTCAACTAATTCACACACCCTGCGAGAA
TCCAACCACAAGAAGCGCCGCAAAATCGGAGAACACGCCGCCGCCGTCCC
GTGGAGATCCGACGCCGAGCACCGGATCTACTCGCGCCGCCTCGTCGAAG
CACTCCGCCGCACTCCCTCGTCTCCGGCAAAGCCTAGAGCCGCCGGCCAG
GTCCGCGATACCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCGGAC
GCGCTGGAGCCGCGCGATCCTCGGCCGCTGGAGGAAGCTCCGGACGCAAC
ACAAGAAGGTCAAGAAGGCGTCGTCTAACGGATTGAAGAGAACGAGGATC
GCCGGCGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAGGCGCGCGT
TCTCGGCCGCTTGGTTCCCGGTTGCCGCAAGGTCTCGTTCCCGAACCTTC
TCGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCC
ATGACGACTCTCGCCGAACTACTCGCCGGCGCCGCGCCGGCCGGAGTCGC
CGGCGCCGCGTTGAGTTGACCGCGCGCGTTGGTTACGACCTGCGCCAGGT
GTTTATTAATTTTTTTTTGTTTTATTTTTTTAATTATATATCGTTTTTAT
TGGTTTCCAGATTCATGTATTTTATCGTGTACACTGTACATGCCATTTGC
TTATTCCTCTCTTTGAGTTCCACTATCACCACCTTCCTTCTTCTTCTTTC
TTTTATTCTTTCATATTTAATTGAATGTGAACATGCTACCTACTTTGATT
CTTTCCTTAACAACTCCCTCATATATAAATAAATAAATCGTGATACATAA
AAAAATGTAC
back to top

Coding sequence (CDS) from alignment at CcLG02_v2.0:32589166..32590225-

>drCajCajn.Asha.2.0.Cc_v2.0_03875.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_03875.1; Name=Cc_v2.0_03875.1; organism=Cajanus cajan; type=CDS; length=564bp; location=Sequence derived from: CcLG02_v2.0:32589166..32590225- (Cajanus cajan
ATGGCTTCCTTCCTAGATTCAACTAATTCACACACCCTGCGAGAATCCAA
CCACAAGAAGCGCCGCAAAATCGGAGAACACGCCGCCGCCGTCCCGTGGA
GATCCGACGCCGAGCACCGGATCTACTCGCGCCGCCTCGTCGAAGCACTC
CGCCGCACTCCCTCGTCTCCGGCAAAGCCTAGAGCCGCCGGCCAGGTCCG
CGATACCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCGGACGCGCT
GGAGCCGCGCGATCCTCGGCCGCTGGAGGAAGCTCCGGACGCAACACAAG
AAGGTCAAGAAGGCGTCGTCTAACGGATTGAAGAGAACGAGGATCGCCGG
CGAGAGGAGGAACCGGTTACCGGCTGTGCAGAAGAAGGCGCGCGTTCTCG
GCCGCTTGGTTCCCGGTTGCCGCAAGGTCTCGTTCCCGAACCTTCTCGAA
GAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCCATGAC
GACTCTCGCCGAACTACTCGCCGGCGCCGCGCCGGCCGGAGTCGCCGGCG
CCGCGTTGAGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR044660IBH1-like
IPR011598bHLH_dom
IPR044549bHLH_AtIBH1-like
IPR036638HLH_DNA-bd_sf
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity