Cc_v2.0_06364.1

Transcript Overview
NameCc_v2.0_06364.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_06364.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length309
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:24072359..24073445 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
ccapsR319Pisum sativum Cameor genome v1aPisum sativum
ccapsR344Pisum sativum Cameor genome v1aPisum sativum
ccapsR404Pisum sativum Cameor genome v1aPisum sativum
ccavrvR286Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR290Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR298Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR360Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR330Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR383Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR356Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR365Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR416Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR323Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR363Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR375Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR393Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavumR322Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR283Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR361Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR299Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR388Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR336Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR424Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR255Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR360Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR370Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR391Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR424Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-XM_014662220.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg54384.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Hedin2.R1.2g124400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
PvulFLAVERTChr09.1000354Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.009G053100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigun09g149800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Psat5g077360.1Pisum sativum Cameor genome v1aPisum sativum
Vum_02G01263.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigun09g149800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_06364drCajCajn.Asha.2.0.Cc_v2.0_06364Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_06364.1drCajCajn.Asha.2.0.cds.Cc_v2.0_06364.1Cajanus cajanCDS
cds.Cc_v2.0_06364.1drCajCajn.Asha.2.0.cds.Cc_v2.0_06364.1_2Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_06364.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_06364.1.exon2Cajanus cajanexon
Cc_v2.0_06364.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_06364.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_06364.1drCajCajn.Asha.2.0.Cc_v2.0_06364.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_06364.1drCajCajn.Asha.2.0.Cc_v2.0_06364.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2K3M4C5|A0A2K3M4C5_TRIPR (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g041684 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.740e-36
Identity = 62/82 (75.61%), Postives = 69/82 (84.15%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQQ 101
            +SNGRY SVLHRA LNNK+TR+SLVV NGPALDKEIGPAPELLEKEKPLF+  KY DYFQVQQK+R +D+  LD IR   QQ
Sbjct:  191 VSNGRYASVLHRAILNNKDTRISLVVVNGPALDKEIGPAPELLEKEKPLFKSIKYCDYFQVQQKSRLSDERALDHIRFSFQQ 272
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2Z6MSK3|A0A2Z6MSK3_TRISU (Fe2OG dioxygenase domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_394840 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.106e-35
Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQQ 101
            +SNGRY SVLHRA LNNK+TR+SLVV NGPALDKEIGPAPELLEKEKPLF+  KY DYF VQQK+R +D+  LD IR  +QQ
Sbjct:  181 VSNGRYASVLHRAILNNKDTRISLVVVNGPALDKEIGPAPELLEKEKPLFKSIKYCDYFLVQQKSRLSDERALDHIRFSSQQ 262
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TS71|A0A151TS71_CAJCA (Flavonol synthase/flavanone 3-hydroxylase OS=Cajanus cajan OX=3821 GN=KK1_009109 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 7.148e-35
Identity = 60/82 (73.17%), Postives = 71/82 (86.59%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQQ 101
            LSNG+Y SVLHRA LNN +TR+S+V++NGPALDKEIGP  ELL+KEKPLF+  KY+DYFQV+QKTR +DK  LDEIRL AQQ
Sbjct:  290 LSNGKYPSVLHRAILNNADTRISVVLSNGPALDKEIGPVVELLDKEKPLFKSMKYRDYFQVKQKTRLSDKCSLDEIRLHAQQ 371
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86VMY2|A0AA86VMY2_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS26469 PE=4 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 6.101e-34
Identity = 59/78 (75.64%), Postives = 68/78 (87.18%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            +SNGRYE VLHRA LNN++TR+S+V+ANGPALDKEIGP  ELLE EKPLFR  KY+DYFQ QQ++R ADKS LDEIRL
Sbjct:  285 VSNGRYERVLHRAILNNRDTRISVVLANGPALDKEIGPVAELLENEKPLFRSIKYRDYFQFQQRSRLADKSSLDEIRL 362
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NSV1|A0A4D6NSV1_VIGUN (Isopenicillin N synthase-like OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g2600 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 7.195e-34
Identity = 61/78 (78.21%), Postives = 68/78 (87.18%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            +SNGRYESVLHRA LNN+ETR+S+V+ANGPALDKEIGP  ELLEKEKPLF   KYQDYFQ QQ++R  DKS LDEIRL
Sbjct:  283 MSNGRYESVLHRAILNNEETRISVVLANGPALDKEIGPLAELLEKEKPLFESMKYQDYFQFQQRSRLNDKSRLDEIRL 360
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8MEA1|A0A8B8MEA1_ABRPR (Protein DMR6-LIKE OXYGENASE 2-like OS=Abrus precatorius OX=3816 GN=LOC113872628 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.020e-33
Identity = 57/81 (70.37%), Postives = 70/81 (86.42%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQ 100
            L+NG+Y SVLHRA LNN +TR+SLVV+NGP+LDKEIGPAPELLE EKPLF+ +KYQ+YF  QQKTRFADKS L+ +R+  +
Sbjct:  285 LTNGKYPSVLHRAILNNTDTRISLVVSNGPSLDKEIGPAPELLENEKPLFKSYKYQEYFHAQQKTRFADKSSLENVRVNVE 365
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|G7J6V4|G7J6V4_MEDTR (Flavonol synthase/flavanone 3-hydroxylase OS=Medicago truncatula OX=3880 GN=11420454 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 7.709e-33
Identity = 58/82 (70.73%), Postives = 70/82 (85.37%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQQ 101
            +SNGRYESVLHRA LNNK+TR+SLVV NGPA D++IGPAPELL KEKPLF+  KY+DYF +QQK+R +D+  LD+IR  AQQ
Sbjct:  284 VSNGRYESVLHRAILNNKDTRISLVVVNGPAEDRDIGPAPELLLKEKPLFKSIKYRDYFLLQQKSRLSDERALDKIRYSAQQ 365
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A396IZU0|A0A396IZU0_MEDTR (Putative oxidoreductase OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr3g0126761 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.095e-32
Identity = 57/81 (70.37%), Postives = 66/81 (81.48%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQ 100
            +SNGRY SVLHRA LNNK+TR+SLVV NGPA DKEIGPAPELLEKEKPLF+  KY DY  VQQK++ +D   LD+IR  +Q
Sbjct:  155 VSNGRYGSVLHRAILNNKDTRISLVVVNGPARDKEIGPAPELLEKEKPLFKSIKYCDYLLVQQKSQLSDGRTLDQIRYSSQ 235
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445BSK6|A0A445BSK6_ARAHY (Fe2OG dioxygenase domain-containing protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g038015 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.107e-32
Identity = 57/78 (73.08%), Postives = 68/78 (87.18%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            +SNGRY+SV+HRA LNN++TR+SLV+ NGP LDKEIGPA  LLEKE PLF+  KY+DYF++QQ TRFA KSGLDEIRL
Sbjct:  271 VSNGRYKSVMHRAVLNNRDTRISLVLVNGPDLDKEIGPALGLLEKEDPLFKTMKYRDYFEIQQMTRFAYKSGLDEIRL 348
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P4B0Y5|A0A6P4B0Y5_ARADU (2-oxoglutarate-dependent dioxygenase 19 OS=Arachis duranensis OX=130453 GN=LOC107460505 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.705e-32
Identity = 57/78 (73.08%), Postives = 68/78 (87.18%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            +SNGRY+SV+HRA LNN++TR+SLV+ NGP LDKEIGPA  LLEKE PLF+  KY+DYF++QQ TRFA KSGLDEIRL
Sbjct:  271 VSNGRYKSVMHRAVLNNRDTRISLVLVNGPDLDKEIGPALGLLEKEDPLFKTMKYRDYFEIQQMTRFAYKSGLDEIRL 348
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6Z244|ODD19_ORYSJ (2-oxoglutarate-dependent dioxygenase 19 OS=Oryza sativa subsp. japonica OX=39947 GN=2ODD19 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.725e-15
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPL-FRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQQG 102
            ++NGRY+ VLHRA +  +++RMS V   GP +D  + P PE+    + L FR  +Y+DY ++QQ     +K+ LD +R+  Q G
Sbjct:  254 VTNGRYKGVLHRAVVGGEQSRMSFVSLIGPCMDTVVEPLPEMAADGRGLEFRGIRYRDYMEMQQSNSINEKTALDIVRVMHQAG 337
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M547|FLS_EUSER (Flavonol synthase/flavanone 3-hydroxylase OS=Eustoma exaltatum subsp. russellianum OX=52518 GN=FLS PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.281e-11
Identity = 29/59 (49.15%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPL-FRRFKYQDY 77
            +SNG+Y+SV HR T+N ++TRMS  V   P  D E+GP P+L+ +E P  F+  KY+DY
Sbjct:  266 MSNGKYKSVYHRTTVNKEKTRMSWPVFLEPPPDHEVGPIPKLVNEENPAKFKTKKYKDY 324
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O04395|FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana OX=3724 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.856e-11
Identity = 31/76 (40.79%), Postives = 45/76 (59.21%), Query Frame = 0 
Query:   12 NLTRGFIQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDYFQVQQKTRF 86
            N+    + LSNG+Y++VLH+ T++ ++TRMS  V   P  D  +GP PEL  E + P F+   Y+DY  V  K  F
Sbjct:  213 NIGDQIMMLSNGKYKNVLHKTTVDKEKTRMSWPVLVSPTYDMVVGPLPELTSEDDPPKFKPIAYKDY--VHNKITF 286
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8S0S6|G2OX3_ORYSJ (Gibberellin 2-beta-dioxygenase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GA2OX3 PE=1 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 7.481e-11
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDYFQVQQKTRFAD 88
            L+NGR++SV HR   N+ ++R+S +   GP L + I P P+LL E E+ L++ F + +Y +   K+R  D
Sbjct:  249 LTNGRFKSVKHRVVANSLKSRVSFIYFGGPPLAQRIAPLPQLLGEGEQSLYKEFTWDEYKKAAYKSRLGD 318
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q07512|FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida OX=4102 GN=FL PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 7.990e-11
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDY 77
            LSNG+Y+SV HR T+N  +TRMS  V   P  + E+GP P+LL E   P F+  KY+DY
Sbjct:  280 LSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPSEHEVGPIPKLLSEANPPKFKTKKYKDY 338
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q41452|FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.864e-10
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDY 77
            LSNG+Y+SV HR T+N  +TRMS  V   P+ + E+GP P L+ E   P F+  KY+DY
Sbjct:  281 LSNGKYKSVYHRTTVNKYKTRMSWPVFLEPSSEHEVGPIPNLINEANPPKFKTKKYKDY 339
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q96330|FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana OX=3702 GN=FLS1 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 5.066e-10
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:   18 IQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDY 77
            ++LSNGRY++VLHR T++ ++TRMS  V   P  +K +GP PEL  +   P F+ F ++DY
Sbjct:  265 LRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDY 325
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9ZWQ9|FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu OX=55188 GN=FLS PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.943e-10
Identity = 27/59 (45.76%), Postives = 40/59 (67.80%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEK-PLFRRFKYQDY 77
            LSNG+Y++VLHR T+N  +TRMS  V   P  D  +GP P+L++ E  P ++  K++DY
Sbjct:  267 LSNGKYKAVLHRTTVNKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 325
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q69LD8|GAOX3_ORYSJ (Gibberellin 20 oxidase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GA20OX3 PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.212e-9
Identity = 29/89 (32.58%), Postives = 47/89 (52.81%), Query Frame = 0 
Query:    6 ADLTSSNLTRGFIQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKP-LFRRFKYQDYFQVQQKTRFADKSGLD 93
            AD    N+   F  L+NGR+ S LHRA +N +  R SL     P LD+ + P P L++   P  F  F ++++ +  Q+   +D + +D
Sbjct:  261 ADAFVVNIGDTFAALTNGRHASCLHRAVVNGRVARRSLTFFLNPRLDRVVSPPPALVDAAHPRAFPDFTWREFLEFTQRHYRSDTNTMD 349
[Close]
BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P24157|ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum OX=4081 GN=ACO4 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.990e-9
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADK 89
            ++NG+Y+SV+HR       TRMSL     P  D  I PAP L+E+ K ++ +F + DY ++    +F  K
Sbjct:  224 ITNGKYKSVMHRVIAQTDGTRMSLASFYNPGNDAVIYPAPSLIEESKQVYPKFVFDDYMKLYAGLKFQPK 293
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: FLS, ATFLS1, FLS1 | FLAVONOL SYNTHASE, flavonol synthase 1 | chr5:2804009-2805175 FORWARD LENGTH=336)

HSP 1 Score: 57.7658 bits (138), Expect = 5.129e-11
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:   18 IQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDY 77
            ++LSNGRY++VLHR T++ ++TRMS  V   P  +K +GP PEL  +   P F+ F ++DY
Sbjct:  265 LRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDY 325
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: FLS, ATFLS1, FLS1 | FLAVONOL SYNTHASE, flavonol synthase 1 | chr5:2804009-2805175 FORWARD LENGTH=336)

HSP 1 Score: 57.7658 bits (138), Expect = 5.129e-11
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:   18 IQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELL-EKEKPLFRRFKYQDY 77
            ++LSNGRY++VLHR T++ ++TRMS  V   P  +K +GP PEL  +   P F+ F ++DY
Sbjct:  265 LRLSNGRYKNVLHRTTVDKEKTRMSWPVFLEPPREKIVGPLPELTGDDNPPKFKPFAFKDY 325
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BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: ATFLS3, FLS3 | flavonol synthase 3 | chr5:25457172-25458427 REVERSE LENGTH=308)

HSP 1 Score: 55.8398 bits (133), Expect = 2.294e-10
Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 0 
Query:   17 FIQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEK--PLFRRFKYQDY 77
            F+++SNG+Y+SV HRA ++ ++TR+S  V    +LD+  GP PEL+  ++  P F+ + Y+DY
Sbjct:  235 FLRMSNGKYKSVEHRAKMDKEKTRISWPVFVESSLDQVFGPLPELITGDENVPKFKPYVYKDY 297
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: ACO1, ATACO1 | ACC oxidase 1 | chr2:8476239-8477226 REVERSE LENGTH=295)

HSP 1 Score: 55.4546 bits (132), Expect = 3.225e-10
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADK 89
            LSNGRY+SV+HR       +R+S+     PA D  I PAP+LL         +++QDY ++   T+F DK
Sbjct:  215 LSNGRYKSVVHRVMTVKHGSRLSIATFYNPAGDAIISPAPKLLYPSG-----YRFQDYLKLYSTTKFGDK 279
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: DLO2 | DMR6-LIKE OXYGENASE 2 | chr4:6483900-6485179 FORWARD LENGTH=348)

HSP 1 Score: 55.4546 bits (132), Expect = 3.706e-10
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEK---PLFRRFKYQDYFQVQQKTRFADKSGLDEIR 96
            +SN +Y+SVLHRA +N+   R+S+     P+ D  I PA EL+ +E+    ++R F Y +YF+    T F  +S +D  +
Sbjct:  265 ISNEKYKSVLHRAVVNSDMERISIPTFYCPSEDAVISPAQELINEEEDSPAIYRNFTYAEYFEKFWDTAFDTESCIDSFK 344
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: ACO1, ATACO1 | ACC oxidase 1 | chr2:8476239-8477354 REVERSE LENGTH=310)

HSP 1 Score: 55.0694 bits (131), Expect = 5.075e-10
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADK 89
            LSNGRY+SV+HR       +R+S+     PA D  I PAP+LL         +++QDY ++   T+F DK
Sbjct:  230 LSNGRYKSVVHRVMTVKHGSRLSIATFYNPAGDAIISPAPKLLYPSG-----YRFQDYLKLYSTTKFGDK 294
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:29545031-29546041 REVERSE LENGTH=278)

HSP 1 Score: 53.5286 bits (127), Expect = 1.751e-9
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEK-PLFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            ++NGRY S+ HRA +N+++ R+S+ + + P  +  I PA  L++++K  LF+    Q+YF      +   KS LD +R+
Sbjct:  200 ITNGRYRSIEHRAVVNSEKERLSVAMFHSPGKETIIRPAKSLVDRQKQCLFKSMSTQEYFDAFFTQKLNGKSHLDLMRI 278
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:29545031-29546360 REVERSE LENGTH=356)

HSP 1 Score: 53.5286 bits (127), Expect = 1.783e-9
Identity = 27/79 (34.18%), Postives = 48/79 (60.76%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEKEKP-LFRRFKYQDYFQVQQKTRFADKSGLDEIRL 97
            ++NGRY S+ HRA +N+++ R+S+ + + P  +  I PA  L++++K  LF+    Q+YF      +   KS LD +R+
Sbjct:  278 ITNGRYRSIEHRAVVNSEKERLSVAMFHSPGKETIIRPAKSLVDRQKQCLFKSMSTQEYFDAFFTQKLNGKSHLDLMRI 356
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: GA4, ATGA3OX1, GA3OX1 | ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1, GA REQUIRING 4, gibberellin 3-oxidase 1 | chr1:5344569-5346078 REVERSE LENGTH=358)

HSP 1 Score: 53.1434 bits (126), Expect = 2.440e-9
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 0 
Query:   17 FIQLSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEK-EKPLFRRFKYQDYFQVQ 81
            F  LSNG ++SVLHRA +N    R+S+    GP  D +I P P+L+   E PL++   +++Y + +
Sbjct:  276 FHILSNGLFKSVLHRARVNQTRARLSVAFLWGPQSDIKISPVPKLVSPVESPLYQSVTWKEYLRTK 341
[Close]
BLAST of Cc_v2.0_06364.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:5817667-5819183 FORWARD LENGTH=361)

HSP 1 Score: 52.373 bits (124), Expect = 4.264e-9
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:   20 LSNGRYESVLHRATLNNKETRMSLVVANGPALDKEIGPAPELLEK-EKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQ 100
            ++NG Y S+ HRA +N ++ R+S+   +   +DKEIGPA  L+++ E   FR  K +DY           K+ LD +R+  +
Sbjct:  280 ITNGTYRSIEHRAMVNLEKERLSIATFHNTGMDKEIGPARSLVQRQEAAKFRSLKTKDYLNGLFSRELKGKAYLDAMRIEGK 361
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_06364.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A2K3M4C5|A0A2K3M4C5_TRIPR3.740e-3675.61Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
tr|A0A2Z6MSK3|A0A2Z6MSK3_TRISU1.106e-3574.39Fe2OG dioxygenase domain-containing protein OS=Tri... [more]
tr|A0A151TS71|A0A151TS71_CAJCA7.148e-3573.17Flavonol synthase/flavanone 3-hydroxylase OS=Cajan... [more]
tr|A0AA86VMY2|A0AA86VMY2_9FABA6.101e-3475.64Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A4D6NSV1|A0A4D6NSV1_VIGUN7.195e-3478.21Isopenicillin N synthase-like OS=Vigna unguiculata... [more]
tr|A0A8B8MEA1|A0A8B8MEA1_ABRPR1.020e-3370.37Protein DMR6-LIKE OXYGENASE 2-like OS=Abrus precat... [more]
tr|G7J6V4|G7J6V4_MEDTR7.709e-3370.73Flavonol synthase/flavanone 3-hydroxylase OS=Medic... [more]
tr|A0A396IZU0|A0A396IZU0_MEDTR4.095e-3270.37Putative oxidoreductase OS=Medicago truncatula OX=... [more]
tr|A0A445BSK6|A0A445BSK6_ARAHY4.107e-3273.08Fe2OG dioxygenase domain-containing protein OS=Ara... [more]
tr|A0A6P4B0Y5|A0A6P4B0Y5_ARADU5.705e-3273.082-oxoglutarate-dependent dioxygenase 19 OS=Arachis... [more]
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BLAST of Cc_v2.0_06364.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10
Match NameE-valueIdentityDescription
sp|Q6Z244|ODD19_ORYSJ4.725e-1539.292-oxoglutarate-dependent dioxygenase 19 OS=Oryza s... [more]
sp|Q9M547|FLS_EUSER2.281e-1149.15Flavonol synthase/flavanone 3-hydroxylase OS=Eusto... [more]
sp|O04395|FLS_MATIN2.856e-1140.79Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
sp|Q8S0S6|G2OX3_ORYSJ7.481e-1138.57Gibberellin 2-beta-dioxygenase 3 OS=Oryza sativa s... [more]
sp|Q07512|FLS_PETHY7.990e-1150.85Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
sp|Q41452|FLS_SOLTU1.864e-1049.15Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
sp|Q96330|FLS1_ARATH5.066e-1045.90Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
sp|Q9ZWQ9|FLS_CITUN8.943e-1045.76Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
sp|Q69LD8|GAOX3_ORYSJ1.212e-932.58Gibberellin 20 oxidase 3 OS=Oryza sativa subsp. ja... [more]
sp|P24157|ACCO4_SOLLC1.990e-937.141-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
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BLAST of Cc_v2.0_06364.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
|5.129e-1145.90Symbols: FLS, ATFLS1, FLS1 | FLAVONOL SYNTHASE, fl... [more]
|5.129e-1145.90Symbols: FLS, ATFLS1, FLS1 | FLAVONOL SYNTHASE, fl... [more]
|2.294e-1041.27Symbols: ATFLS3, FLS3 | flavonol synthase 3 | chr5... [more]
|3.225e-1040.00Symbols: ACO1, ATACO1 | ACC oxidase 1 | chr2:84762... [more]
|3.706e-1036.25Symbols: DLO2 | DMR6-LIKE OXYGENASE 2 | chr4:64839... [more]
|5.075e-1040.00Symbols: ACO1, ATACO1 | ACC oxidase 1 | chr2:84762... [more]
|1.751e-934.18Symbols: no symbol available | no full name availa... [more]
|1.783e-934.18Symbols: no symbol available | no full name availa... [more]
|2.440e-937.88Symbols: GA4, ATGA3OX1, GA3OX1 | ARABIDOPSIS THALI... [more]
|4.264e-934.15Symbols: no symbol available | no full name availa... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027443Isopenicillin N synthase-like superfamilyGENE3D2.60.120.330coord: 11..100
e-value: 4.3E-14
score: 54.5
IPR050295Plant 2-oxoglutarate-dependent oxidoreductasesPANTHERPTHR47991OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASEcoord: 20..81
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 19..95

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_06364.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_06364.1; Name=Cc_v2.0_06364.1; organism=Cajanus cajan; type=mRNA; length=309bp
ATGTATCAAATTACCGCTGATTTAACCAGTAGTAATTTGACACGTGGCTT
TATACAGTTGAGTAATGGGAGGTACGAGAGTGTGCTACACCGAGCGACTC
TCAACAACAAGGAAACTAGGATGAGTCTTGTGGTGGCAAATGGACCTGCA
TTAGATAAGGAAATTGGACCTGCACCGGAGCTGTTGGAGAAAGAAAAGCC
ATTGTTTAGAAGGTTCAAGTACCAAGACTACTTCCAAGTTCAGCAGAAGA
CACGTTTTGCTGATAAAAGTGGCTTGGACGAGATTCGACTTAGAGCTCAA
CAAGGATAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_06364.1

>drCajCajn.Asha.2.0.Cc_v2.0_06364.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_06364.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_06364.1; organism=Cajanus cajan; type=polypeptide; length=102bp
MYQITADLTSSNLTRGFIQLSNGRYESVLHRATLNNKETRMSLVVANGPA
LDKEIGPAPELLEKEKPLFRRFKYQDYFQVQQKTRFADKSGLDEIRLRAQ
QG
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mRNA from alignment at CcLG03_v2.0:24072359..24073445-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_06364.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_06364.1; Name=Cc_v2.0_06364.1; organism=Cajanus cajan; type=mRNA; length=1087bp; location=Sequence derived from: CcLG03_v2.0:24072359..24073445- (Cajanus cajan
ATGTATCAAATTACCGCTGATTTAACCAGTAGTAATTTGACACGTGGCTT
TATACAGTAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAA
AAAAAATTAATTAGTGGCGCTGTGGGCCACAGCGACTCTGTGTCGCTATA
GGCCACAGCGCCACTTATATAAATAATTAAATCTATTTTTTAAAATTACG
TTTTGAAATAAATTTTTTTTTATAAATATATAATAAGTATACTCAGTTGA
TTATTTTAAGGTTACATTTAAATTATTTCAGTTTTTTTTGTTTTTTTTTC
TTAAATGGTGTCGCTATGGGCTACACCATCTTTGTTGGCTCACAAACTGT
GTTGGTCCAGCCCATAGCGACACTGTTGTGGCTCATTCCAGCCATTCCTC
CGCCAAAAAAAAAAAAGCCACGTGACATTGGTGTCGCTATGGGCCATAGC
GACACCGTTGTAAACAGTCCCAAAGGCGTAAATAAATTCAAAACAGCCCA
TTTAGGTAAATAACTTGGTCAACGACCCTACTTTGGTCAAAAAGTCTTGA
TCTGTTGCAACCCTTTGTTTCTATGGTATTATAGGTTGAGTAATGGGAGG
TACGAGAGTGTGCTACACCGAGCGACTCTCAACAACAAGGAAACTAGGAT
GAGTCTTGTGGTGGCAAATGGACCTGCATTAGATAAGGAAATTGGACCTG
CACCGGAGCTGTTGGAGAAAGAAAAGCCATTGTTTAGAAGGTTCAAGTAC
CAAGACTACTTCCAAGTTCAGCAGAAGACACGTTTTGCTGATAAAAGTGG
CTTGGACGAGATTCGACTTAGAGCTCAACAAGGATAG
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Coding sequence (CDS) from alignment at CcLG03_v2.0:24072359..24073445-

>drCajCajn.Asha.2.0.Cc_v2.0_06364.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_06364.1; Name=Cc_v2.0_06364.1; organism=Cajanus cajan; type=CDS; length=309bp; location=Sequence derived from: CcLG03_v2.0:24072359..24073445- (Cajanus cajan
ATGTATCAAATTACCGCTGATTTAACCAGTAGTAATTTGACACGTGGCTT
TATACAGTTGAGTAATGGGAGGTACGAGAGTGTGCTACACCGAGCGACTC
TCAACAACAAGGAAACTAGGATGAGTCTTGTGGTGGCAAATGGACCTGCA
TTAGATAAGGAAATTGGACCTGCACCGGAGCTGTTGGAGAAAGAAAAGCC
ATTGTTTAGAAGGTTCAAGTACCAAGACTACTTCCAAGTTCAGCAGAAGA
CACGTTTTGCTGATAAAAGTGGCTTGGACGAGATTCGACTTAGAGCTCAA
CAAGGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR027443IPNS-like_sf
IPR050295Plant_2OG-oxidoreductases