Cc_v2.0_06951.2

Transcript Overview
NameCc_v2.0_06951.2
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_06951.2
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length369
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:34353061..34356677 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0036Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0037Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0208Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0286Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL255Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0336Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL528Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0710Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0713Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL706Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0945Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
ccapsR343Pisum sativum Cameor genome v1aPisum sativum
carccaL273Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR396Pisum sativum Cameor genome v1aPisum sativum
carccaL363Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR319Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR337Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR355Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR312Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR352Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR334Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR371Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR355Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR425Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR336Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR369Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR388Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0234Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0311Cajanus cajan Asha genome v1.0Cajanus cajan
ccccaL0604Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR319Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR281Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR388Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR402Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR331Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavuR336Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR433Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavunR241Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR352Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR284Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR371Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR386Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR434Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_06951drCajCajn.Asha.2.0.Cc_v2.0_06951Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_06951.2.exon1drCajCajn.Asha.2.0.Cc_v2.0_06951.2.exon1Cajanus cajanexon
Cc_v2.0_06951.2.exon2drCajCajn.Asha.2.0.Cc_v2.0_06951.2.exon2Cajanus cajanexon
Cc_v2.0_06951.2.exon3drCajCajn.Asha.2.0.Cc_v2.0_06951.2.exon3Cajanus cajanexon
Cc_v2.0_06951.2.exon4drCajCajn.Asha.2.0.Cc_v2.0_06951.2.exon4Cajanus cajanexon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_06951.2.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_06951.2.utr5p1Cajanus cajanfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_06951.2drCajCajn.Asha.2.0.cds.Cc_v2.0_06951.2Cajanus cajanCDS
cds.Cc_v2.0_06951.2drCajCajn.Asha.2.0.cds.Cc_v2.0_06951.2_2Cajanus cajanCDS
cds.Cc_v2.0_06951.2drCajCajn.Asha.2.0.cds.Cc_v2.0_06951.2_3Cajanus cajanCDS
cds.Cc_v2.0_06951.2drCajCajn.Asha.2.0.cds.Cc_v2.0_06951.2_4Cajanus cajanCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_06951.2.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_06951.2.utr3p1Cajanus cajanthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_06951.2drCajCajn.Asha.2.0.Cc_v2.0_06951.2Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_06951.2drCajCajn.Asha.2.0.Cc_v2.0_06951.2-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RLM7|A0A151RLM7_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_035130 PE=4 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 9.020e-75
Identity = 112/125 (89.60%), Postives = 116/125 (92.80%), Query Frame = 0 
Query:    1 MLTYLCI---QTLECLGIGIESHASSKHIGVFHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M+  +C+   +T    GIGIESHASSKHIGVFHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ
Sbjct:    1 MVPAMCLTSPRTTPPPGIGIESHASSKHIGVFHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 125
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EVT0|A0A371EVT0_MUCPR (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_50674 PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 8.340e-69
Identity = 105/131 (80.15%), Postives = 115/131 (87.79%), Query Frame = 0 
Query:    1 MLTYLCIQTL------ECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M+  LC+ +       ECLG+GIESH +SKH+GV   F GPL TKYRFVIAKAAKGN+NTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVF+G+FKAGDSCWLCGGRKEMLCGNCNGAGF+GGFLSTYDQ
Sbjct:    1 MVLALCLSSPRTTPAPECLGVGIESHTNSKHVGVNYVFQGPLTTKYRFVIAKAAKGNQNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ 131
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6NQQ8|A0A4D6NQQ8_VIGUN (Heat shock protein DnaJ OS=Vigna unguiculata OX=3917 GN=DEO72_LG11g3253 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.117e-63
Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = 0 
Query:    1 MLTYLCIQTL------ECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M   LC+ +       E LG+ IESHA+SKHIGV   F GPL TKYR VI KAAK +RNTKPNSVICADCDGNGAV CSQCKG+GVNSVD+F+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ
Sbjct:    1 MFPALCLSSPRATPPSESLGVSIESHANSKHIGVNYVFIGPLTTKYRPVIVKAAKEDRNTKPNSVICADCDGNGAVQCSQCKGNGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 131
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U456|A0A1S3U456_VIGRR (Uncharacterized protein LOC106761739 OS=Vigna radiata var. radiata OX=3916 GN=LOC106761739 PE=4 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 4.022e-62
Identity = 100/131 (76.34%), Postives = 110/131 (83.97%), Query Frame = 0 
Query:    1 MLTYLCIQTL------ECLGIGIESHASSKHIGVFH---GPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M   LC+ T       E LGIGIESHA+SKHIGV +   GPL  KYR VIAKAAK ++NTKPNS+ICADCDGNGAV CSQCKG+GVNSVDVF+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLST+DQ
Sbjct:    1 MFPALCLSTPKTTPPSESLGIGIESHANSKHIGVNYMIIGPLTAKYRPVIAKAAKEDQNTKPNSMICADCDGNGAVQCSQCKGNGVNSVDVFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTHDQ 131
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445K5P9|A0A445K5P9_GLYSO (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Glycine soja OX=3848 GN=D0Y65_013962 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 6.167e-61
Identity = 99/132 (75.00%), Postives = 107/132 (81.06%), Query Frame = 0 
Query:    1 MLTYLCIQ---TLECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGN----RNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            ML  LC++   T    GIG ESH + KH GV   F  P+ TKYR+VI KAAK N    RNTKPNSVICADCDGNGAVLCSQCKGSGVNSVD+F+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ
Sbjct:    1 MLPALCLRSPNTTPAPGIGKESHTNPKHFGVNYAFQVPIATKYRYVITKAAKDNQSTNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 132
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|I1K8V8|I1K8V8_SOYBN (CR-type domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_06G069100 PE=4 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 6.167e-61
Identity = 99/132 (75.00%), Postives = 107/132 (81.06%), Query Frame = 0 
Query:    1 MLTYLCIQ---TLECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGN----RNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            ML  LC++   T    GIG ESH + KH GV   F  P+ TKYR+VI KAAK N    RNTKPNSVICADCDGNGAVLCSQCKGSGVNSVD+F+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ
Sbjct:    1 MLPALCLRSPNTTPAPGIGKESHTNPKHFGVNYAFQVPIATKYRYVITKAAKDNQSTNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 132
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LEU8|A0A8B8LEU8_ABRPR (Uncharacterized protein LOC113864779 OS=Abrus precatorius OX=3816 GN=LOC113864779 PE=4 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.839e-60
Identity = 98/135 (72.59%), Postives = 108/135 (80.00%), Query Frame = 0 
Query:    1 MLTYLCI------QTLECLGIGIESHASSKHI---GVFHGPLNTKYRFVIAKAAKGNR----NTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M+  LC+      +T    GIGIESH +SKHI    VF GP  TK+ F+IAKA KGN+    NTKPNSVICADCDGNGAVLCSQCKGSGVNS D+FDG+FKAGDSCWLCGGRK+MLCGNCNGAGFVGGFLSTYDQ
Sbjct:    1 MVPALCLTPPSSLKTTPSPGIGIESHTNSKHIRVNNVFQGPPTTKHCFIIAKATKGNQKGNQNTKPNSVICADCDGNGAVLCSQCKGSGVNSADIFDGQFKAGDSCWLCGGRKDMLCGNCNGAGFVGGFLSTYDQ 135
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RC25|A0A0S3RC25_PHAAN (CR-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G081500 PE=4 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.140e-59
Identity = 98/131 (74.81%), Postives = 108/131 (82.44%), Query Frame = 0 
Query:    1 MLTYLCIQTL------ECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M   LC+ +       E LGIGIE +A+SKHIGV   F GPL  KYR VIAKAAK +RNTK NS+ICADCDGNGAV CSQCKG+GVNSVDVF+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLST+DQ
Sbjct:    1 MFPALCLSSPKSTPPSESLGIGIEGYANSKHIGVNYVFIGPLTAKYRPVIAKAAKEDRNTKTNSMICADCDGNGAVQCSQCKGNGVNSVDVFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTHDQ 131
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|C6SYW2|C6SYW2_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.594e-59
Identity = 97/132 (73.48%), Postives = 105/132 (79.55%), Query Frame = 0 
Query:    1 MLTYLCIQ---TLECLGIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGN----RNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            ML  LC++   T    GIG ESH + KH GV   F  P+ TKYR+VI KAAK N    RNTKPNSVICAD DGNGAVLCSQCKGSGVNSVD+F+G+FKAGDSCWLCGGRKEMLCGNCN AGFVGGFLSTYDQ
Sbjct:    1 MLPALCLRSPNTTPAPGIGKESHTNPKHFGVNYAFQVPIATKYRYVITKAAKDNQSTNRNTKPNSVICADSDGNGAVLCSQCKGSGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNVAGFVGGFLSTYDQ 132
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UHH6|A0A0L9UHH6_PHAAN (CR-type domain-containing protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan04g218200 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.362e-58
Identity = 96/128 (75.00%), Postives = 107/128 (83.59%), Query Frame = 0 
Query:    1 MLTYLCIQTLECL---GIGIESHASSKHIGV---FHGPLNTKYRFVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            M   LC+ + +     GIGIE +A+SKHIGV   F GPL  KYR VIAKAAK +RNTK NS+ICADCDGNGAV CSQCKG+GVNSVDVF+G+FKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLST+DQ
Sbjct:    1 MFPALCLSSPKSTPPSGIGIEGYANSKHIGVNYVFIGPLTAKYRPVIAKAAKEDRNTKTNSMICADCDGNGAVQCSQCKGNGVNSVDVFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTHDQ 128
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SN73|BSD2_ARATH (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BSD2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 4.314e-33
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0 
Query:   39 FVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            F +  A    + TKPNS++CA+C+G G V CSQCKG GVN +D F+G+FKAG  CWLC G+KE+LCG+CNGAGF+GGFLST+D+
Sbjct:   53 FEVKAANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEVLCGDCNGAGFIGGFLSTFDE 136
[Close]
BLAST of Cc_v2.0_06951.2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9XF14|BSD2_MAIZE (Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic OS=Zea mays OX=4577 GN=BSD2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.940e-33
Identity = 48/76 (63.16%), Postives = 66/76 (86.84%), Query Frame = 0 
Query:   47 GNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
              ++ K  S++C DC+GNGA++C++C+G+GVNSVD F+GRFKAG  CWLC G++E+LCGNCNGAGF+GGFLST+D+
Sbjct:   51 AKKHQKVKSILCQDCEGNGAIVCTKCEGNGVNSVDYFEGRFKAGSLCWLCRGKREILCGNCNGAGFLGGFLSTFDE 126
[Close]
BLAST of Cc_v2.0_06951.2 vs. Araport11
Match: | (Symbols: BSD2 | BUNDLE SHEATH DEFECTIVE 2 | chr3:17569576-17570262 FORWARD LENGTH=136)

HSP 1 Score: 115.546 bits (288), Expect = 4.488e-34
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0 
Query:   39 FVIAKAAKGNRNTKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRKEMLCGNCNGAGFVGGFLSTYDQ 122
            F +  A    + TKPNS++CA+C+G G V CSQCKG GVN +D F+G+FKAG  CWLC G+KE+LCG+CNGAGF+GGFLST+D+
Sbjct:   53 FEVKAANNNPQGTKPNSLVCANCEGEGCVACSQCKGGGVNLIDHFNGQFKAGALCWLCRGKKEVLCGDCNGAGFIGGFLSTFDE 136
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_06951.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151RLM7|A0A151RLM7_CAJCA9.020e-7589.60Uncharacterized protein OS=Cajanus cajan OX=3821 G... [more]
tr|A0A371EVT0|A0A371EVT0_MUCPR8.340e-6980.15Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic (... [more]
tr|A0A4D6NQQ8|A0A4D6NQQ8_VIGUN5.117e-6376.34Heat shock protein DnaJ OS=Vigna unguiculata OX=39... [more]
tr|A0A1S3U456|A0A1S3U456_VIGRR4.022e-6276.34Uncharacterized protein LOC106761739 OS=Vigna radi... [more]
tr|A0A445K5P9|A0A445K5P9_GLYSO6.167e-6175.00Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic O... [more]
tr|I1K8V8|I1K8V8_SOYBN6.167e-6175.00CR-type domain-containing protein OS=Glycine max O... [more]
tr|A0A8B8LEU8|A0A8B8LEU8_ABRPR8.839e-6072.59Uncharacterized protein LOC113864779 OS=Abrus prec... [more]
tr|A0A0S3RC25|A0A0S3RC25_PHAAN1.140e-5974.81CR-type domain-containing protein OS=Vigna angular... [more]
tr|C6SYW2|C6SYW2_SOYBN7.594e-5973.48Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
tr|A0A0L9UHH6|A0A0L9UHH6_PHAAN1.362e-5875.00CR-type domain-containing protein OS=Phaseolus ang... [more]
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BLAST of Cc_v2.0_06951.2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 2
Match NameE-valueIdentityDescription
sp|Q9SN73|BSD2_ARATH4.314e-3361.90Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic O... [more]
sp|Q9XF14|BSD2_MAIZE4.940e-3363.16Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic O... [more]
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BLAST of Cc_v2.0_06951.2 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|4.488e-3461.90Symbols: BSD2 | BUNDLE SHEATH DEFECTIVE 2 | chr3:1... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 46..118
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 53..113

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_06951.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_06951.2; Name=Cc_v2.0_06951.2; organism=Cajanus cajan; type=mRNA; length=369bp
ATGCTAACCTATCTCTGTATTCAAACTTTAGAATGCTTAGGTATTGGTAT
AGAAAGCCATGCAAGTTCAAAGCATATTGGAGTGTTCCATGGCCCTCTAA
ATACCAAATATCGCTTTGTCATTGCAAAGGCTGCAAAAGGCAACCGAAAC
ACAAAACCGAATAGTGTGATTTGTGCTGACTGTGATGGAAATGGAGCTGT
TCTCTGCTCTCAATGCAAAGGTAGCGGGGTGAACTCTGTTGATGTTTTCG
ATGGACGGTTTAAAGCTGGTGACTCGTGTTGGCTTTGCGGAGGTAGGAAG
GAGATGTTATGTGGGAATTGCAATGGAGCAGGCTTTGTTGGTGGCTTCTT
GAGCACTTATGATCAGTAG
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_06951.2

>drCajCajn.Asha.2.0.Cc_v2.0_06951.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_06951.2; Name=drCajCajn.Asha.2.0.Cc_v2.0_06951.2; organism=Cajanus cajan; type=polypeptide; length=122bp
MLTYLCIQTLECLGIGIESHASSKHIGVFHGPLNTKYRFVIAKAAKGNRN
TKPNSVICADCDGNGAVLCSQCKGSGVNSVDVFDGRFKAGDSCWLCGGRK
EMLCGNCNGAGFVGGFLSTYDQ
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mRNA from alignment at CcLG03_v2.0:34353061..34356677+

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_06951.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_06951.2; Name=Cc_v2.0_06951.2; organism=Cajanus cajan; type=mRNA; length=3617bp; location=Sequence derived from: CcLG03_v2.0:34353061..34356677+ (Cajanus cajan
CTCAGTTTGACTGTTTGAGTGTATAACAACAACACTGCATTATCTAATCC
TCACCGCTTCAAGTGTTGTTCATTACTCAGCCAACTTAAACAAATTTTAG
AGTATATTCTAAATCTTCCAATGGTCCCTGCCATGTGCCTAACTTCCCCT
AGAACTACACCACCACCAGGTCACCACCCTTGGCGATGCCTTATCTGTGC
CTGTGTTTGTATACACTGTGTTATCTTGTGATATTCCGGTTTTATGCTAA
CCTATCTCTGTATTCAAACTTTAGAATGCTTAGGTATTGGTATAGAAAGC
CATGCAAGTTCAAAGCATATTGGAGTGTTCCATGGCCCTCTAAATACCAA
ATATCGCTTTGTCATTGCAAAGGTACATTTGTATATGCTCATAACTTTAG
TCTAAAATGTGCTGCCTTGAGCATAATGATTTGAGGTAGGTAGTTATGTT
TGCATTGGCTAACTTACTAATTAGTTTTCTATTCATGTAGGCTGCAAAAG
GCAACCGAAACACAAAACCGAATAGTGTGATTTGTGCTGACTGTGATGGA
AATGGTAAGATGGCCTCTGACTTTACATGGCTAGTAGATGCAAAGTAATT
TTTCTTGTTATTTTTTTTTCCAACGGTTAGCACATCAAATAGTCACGAGT
TACGTGTATGAAAAGACATCTGTCGAGAGATGTTAGTTCCTTTGACATGG
TAGGTTGAAGAAGACTAAAACAAGAGAAAGTATCTAGAATTAGTAACTTT
TGGTTTTGTTGTGTCATGTGTGATCAACAGGAGCTGTTCTCTGCTCTCAA
TGCAAAGGTAGCGGGGTGAACTCTGTTGATGTTTTCGATGGACGGTTTAA
AGCTGGTGACTCGTGTTGGCTTTGCGGGTACCTAAATAAACCATTCTATT
CTAAATATTTTTTTTATGAGCTCTATCTGATACACAAAAACCTACTTGCT
AGTCTGTTTGCATTCTTAAACTAAACTTGAGTTGTTCCGAATACTACAAT
GAAGCCCTTCCATTAAGGTCAACTTTTATAGCCTGGAAAGTGAAGTAGGG
AATTTTGACAATGGTTTAATAAACAACCGTTTGTTTTTCTTATTGGATTC
CATCAATCATCTTACAAATTATTTTTTCTCTTTCTAGAGGTAGGAAGGAG
ATGTTATGTGGGAATTGCAATGGAGCAGGCTTTGTTGGTGGCTTCTTGAG
CACTTATGATCAGTAGGGATCAAGTCCTTGTTTGTAGCTAGGGATAGCTC
CAACTACTTTAATATCACTCTAGATTTTATATTTGGTAGTTCTCAGTTCA
CTTGTATGTAGCCATAGTGATTGCTTAAAAACGAATAGACAGAAATATGC
AATATTATATTTGCCCCCTTTGTAAACAGGTTAGCTGTCACAACACTCAT
ATTTTTGTTGTCACCTTGAGACTTGGGAGAGGGGATAGTGAGATAACAAT
GCAGCCGACAGAAACAGCAAGAGAGATAAAAAGGAATGCTAAAATCAAAG
ATTGCTGAGAAAAACCAAATAGAGAAAGATACAAGAAAATGCCTGTACAA
AGAAGGAAAGGTGAATCGAGTCAAAGCAACAAATAACAAGAAGGATGAAA
ACAAAGATAAACAAAGGATGAAAGTAGAGAAAAAAACAGGAGAAATGAGA
TTTTAAAATAATGCAACGGAGTCTAAGAAACTGAACAATAAGAAATCGCC
AAATAGTATGCATAATTTCCTTTCCATCCTTCTTTTGTTTCATATGAGAA
TCTACAAGTGAAACAGGGAAATGGATATGGATCCTTCGTACACATGACAA
ATCATGTCTAAATTTTGTGTCTATTTCTTTTCTAATAAACATTGATTACA
GTAGATTTGAAGATAAACACGATAAGATCCATGTTATTCTGGGGAACTAT
TTGGTTGCATTCCCTAGTGCAGTTATTTTTTTGTTCAATCCTCTTGCAAT
TGCAAAGCCTAGTCATGCAGAGGAGGCAATGAGAAAATGCTTACTGTCGA
GCTTCTACCCCTAATTTCTTCCAAGCTACGCAGTGCTGATAAAGTTAGTT
TGGTGAACGTGCTCTCCATGTTTTCAATTTCAGCAAGTTCTCTGGGAACA
TGCATCAGCGTCTCTTTGTTTTCATTTTCAGTCACGGAGCCACATTCATC
CTCCTCATAATCCTCACCAATTGAAAGCCAGTCATTGGTGAAAAGAATAC
TCAGTATCACCTCACACTCCTTTACAAGCTTGTTAAGCACATCAATCTTG
AAAAAAGGCTGGTTCAACACATCTTGGATAAAAGGCAAGCGATGTAGTGC
ACCAGTTCGCTTATCATATTTCTTTATTATCTTCACTAGACCTGCAAAAA
ATTCATCATTAAACTCCTTAATCTAGAATATTTCCCTCACTTTGTGTACA
AATGAAGGAAAGAAAATCCGATAAATGCTAGCAATATACTCACCGGTACT
TTCTTTGACTCTTTCTAACACATTCTTTATTACTGATAAATAAAATACAC
GAGTTCCACTGAATATATAGATCTTATTCCTAGACTAGTGAAACTCAAAT
GGATTTCAACCATGATAAATGTTAGTAATATACTCTCTACATACTTTTTT
GAACATGTGCCGAAATTTATTCAAAATCACCAACTTTTGTTGATGTCACC
GCTTATTTAACTAGTCTCATTCATTGGTTTTGTAGTTCCCAATTCTTAAT
CCAAAATGTATTATTAGTACTCTTCTTCTGACTAATAAGAAAAAGCATGT
TAGATAGTTTCAGACATTCTCATCAACCACTCCTAATGAAAACACACTAG
TGAGGAACAATTGCATTCATGCATGAGCTCTTAGAACATGCCTGTGTAGT
TGAGTGCAGTATAGTTCTCTAACAAAACCATCTCCCCATGAAAATCCACT
ATTTCCCTCCCTAGTGACATCAACTCCACGTTTGAATCCACAGCTCTGGC
AACTCTGTCTTGTAACTCCTGCAACACAACACGCAAACCATTGCTCTTAA
ATTCACAAACCAAAAAACATAAAAAAAATGGGAATTTGGAAATTGTGAGA
CACAGTTACCTTCCACTTGATGATATACTCTTCTTCCTTGTCAACAAAGA
AAGCATTAAACTTATCAATCTCAAGCTCCAAAAGGTGAAGGAAATGGTTA
AGCTCTTCAGCATCCAAACGGGGTGGAGTGAGTGCATCTTTAGGACACAT
AACCTTCAACAGTTTCTTCAAGTCTTTGTAGGACAAGAATTGGTCACGCC
ACTCGGGCAGGGTCTGCTCGATCTGGCTCTTCAGGATCTTCCAGAACTTC
ATGGCAAGAAGTCAAGAACAAACAACACTTGTTCTATTGCTCAGTTTTGC
ACAAGGAGATGTTAGTGGAGTTGAGTGGATTAGATTAAAAGTAAATAAAG
GGAAAGAAATGCTATTGTTCGGGTTCCGGAATCGGAATATTAATGTTCAA
GTTGGAATATCCTTAATGTTCTACACGCAATGTGCATAGGTTTCGCCGGT
TTCTTTTGTCACTGATAATAGTATAATTCTATTATGTTCCTTTAGTTGCC
ATGTTGCTTAGGATTGATCAAAATTCACTTGATGCCCAAATCATAAAATG
TACTGTAGTGAATGGAC
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Coding sequence (CDS) from alignment at CcLG03_v2.0:34353061..34356677+

>drCajCajn.Asha.2.0.Cc_v2.0_06951.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_06951.2; Name=Cc_v2.0_06951.2; organism=Cajanus cajan; type=CDS; length=369bp; location=Sequence derived from: CcLG03_v2.0:34353061..34356677+ (Cajanus cajan
ATGCTAACCTATCTCTGTATTCAAACTTTAGAATGCTTAGGTATTGGTAT
AGAAAGCCATGCAAGTTCAAAGCATATTGGAGTGTTCCATGGCCCTCTAA
ATACCAAATATCGCTTTGTCATTGCAAAGGCTGCAAAAGGCAACCGAAAC
ACAAAACCGAATAGTGTGATTTGTGCTGACTGTGATGGAAATGGAGCTGT
TCTCTGCTCTCAATGCAAAGGTAGCGGGGTGAACTCTGTTGATGTTTTCG
ATGGACGGTTTAAAGCTGGTGACTCGTGTTGGCTTTGCGGAGGTAGGAAG
GAGATGTTATGTGGGAATTGCAATGGAGCAGGCTTTGTTGGTGGCTTCTT
GAGCACTTATGATCAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf