Cc_v2.0_07080.1

Transcript Overview
NameCc_v2.0_07080.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_07080.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length366
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:36043843..36044208 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0086Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0286Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL258Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0336Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL528Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0710Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL716Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carccaL036Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR343Pisum sativum Cameor genome v1aPisum sativum
ccapsR360Pisum sativum Cameor genome v1aPisum sativum
ccapsR397Pisum sativum Cameor genome v1aPisum sativum
carccaL287Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL363Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR320Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR342Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR361Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR312Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR354Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR325Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR342Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR425Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR327Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR336Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR350Vicia sativa cv. Studenica genome v1.0Vicia sativa
carccaL583Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavssR389Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR391Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0679Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR330Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR387Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR388Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR327Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR410Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR336Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccapvfR348Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR281Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR375Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR290Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR433Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR434Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_30285Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun08g041300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vfaba.Hedin2.R1.3g211120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vum_02G02364.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat6g022440.1Pisum sativum Cameor genome v1aPisum sativum
Vigun08g041300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-XM_014652381.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_02G00543.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_03G01744.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_09852Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun09g221400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.Ca_v2.0_01233Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
PvulFLAVERTChr09.605Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg35576.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun09g221400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
rna-XM_014645761.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg20290.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.Ca_v2.0_19762Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-XM_014648283.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
PvulFLAVERTChr03.1000787Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.Ca_v2.0_11677Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
PvulFLAVERTChr09.1001336Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.Ca_v2.0_14896Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
rna-TanjilR_30671Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg55212.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.001G039200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_01G03698.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.2g175400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Va01G094710.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg55116.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G081400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_032819Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_07080drCajCajn.Asha.2.0.Cc_v2.0_07080Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_07080.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07080.1Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_07080.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_07080.1.exon1Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_07080.1drCajCajn.Asha.2.0.Cc_v2.0_07080.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_07080.1drCajCajn.Asha.2.0.Cc_v2.0_07080.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RSQ8|A0A151RSQ8_CAJCA (Ultraviolet-B-repressible protein OS=Cajanus cajan OX=3821 GN=KK1_032819 PE=4 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.306e-79
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKRA 121
            MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKRA
Sbjct:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKRA 121
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371EI58|A0A371EI58_MUCPR (Ultraviolet-B-repressible protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_55581 PE=4 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 8.181e-65
Identity = 106/117 (90.60%), Postives = 110/117 (94.02%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDP 117
            MASASVPTALP SSVTHNKPSS+AFFRPLPLRQ KRTLFT   SKSK+QINASLKEKA+TGLT ASFTASMVIPEVAHAAG DFSPSLKNFLLSIFAGGV+LGAIFGAVIGVSNFDP
Sbjct:   28 MASASVPTALPLSSVTHNKPSSKAFFRPLPLRQPKRTLFTN--SKSKLQINASLKEKALTGLTGASFTASMVIPEVAHAAGYDFSPSLKNFLLSIFAGGVVLGAIFGAVIGVSNFDP 142
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JU06|I1JU06_SOYBN (Ultraviolet-B-repressible protein OS=Glycine max OX=3847 GN=GLYMA_04G055300 PE=4 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.823e-60
Identity = 104/122 (85.25%), Postives = 109/122 (89.34%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHN-KPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP AL  SSVT+N KPSSEAFFRPLPLRQ KRTLFT K +S SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGGV+L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMALSLSSVTNNNKPSSEAFFRPLPLRQPKRTLFTTKAVSNSKPQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7AXB1|V7AXB1_PHAVU (Ultraviolet-B-repressible protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G081400g PE=4 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.375e-60
Identity = 99/120 (82.50%), Postives = 107/120 (89.17%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP AL  +SVTH+KPS +AFFRPLPL Q K+TL TKPLS S +QINASLKEKAVTGLTAA+FTASMVIPEVA AAGSDFSPSLKNFL SIFAGGV+L AI GAV+GVSNFDPVKR
Sbjct:    1 MASASVPVALSLTSVTHSKPSCQAFFRPLPLPQPKKTLSTKPLSNSNLQINASLKEKAVTGLTAATFTASMVIPEVALAAGSDFSPSLKNFLFSIFAGGVVLVAILGAVVGVSNFDPVKR 120
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6SVA3|C6SVA3_SOYBN (Ultraviolet-B-repressible protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.077e-59
Identity = 103/122 (84.43%), Postives = 108/122 (88.52%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHN-KPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP AL   SVT+N KPSSEAFFRPLPLRQ KRTLFT K +S SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGGV+L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMALSLGSVTNNNKPSSEAFFRPLPLRQPKRTLFTTKAVSNSKPQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445KWJ2|A0A445KWJ2_GLYSO (Ultraviolet-B-repressible protein OS=Glycine soja OX=3848 GN=D0Y65_008863 PE=4 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.891e-59
Identity = 103/122 (84.43%), Postives = 108/122 (88.52%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHN-KPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP AL  SSVT+N KPSSEAFFRPLPLRQ KRT FT K +S SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGGV+L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMALSLSSVTNNNKPSSEAFFRPLPLRQPKRTHFTTKAVSNSKPQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGVVLAAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3U5F4|A0A1S3U5F4_VIGRR (Uncharacterized protein LOC106762068 OS=Vigna radiata var. radiata OX=3916 GN=LOC106762068 PE=4 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.345e-58
Identity = 97/120 (80.83%), Postives = 106/120 (88.33%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP AL  +SVTH KPSS+AFFRPLP  Q KRT   KP S S +QINASLKEKAVTGLTAA+FTASMVIPEVA+AAGSDFSPSLKNFLLSIFAGG++L AIFGAV+GV+NFDPVKR
Sbjct:    1 MASASVPVALSLTSVTHRKPSSQAFFRPLPSPQPKRTFSKKPPSNSNLQINASLKEKAVTGLTAATFTASMVIPEVANAAGSDFSPSLKNFLLSIFAGGIVLVAIFGAVVGVANFDPVKR 120
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1K8F8|I1K8F8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100780841 PE=4 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.508e-58
Identity = 101/122 (82.79%), Postives = 106/122 (86.89%), Query Frame = 0 
Query:    1 MASASVPTALPPSSV-THNKPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP A   SSV  +NKPSSEAFFRPLPLRQ KRTLFT K +S SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGG +L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMAFSLSSVINNNKPSSEAFFRPLPLRQPKRTLFTTKAVSNSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0B2RCP0|A0A0B2RCP0_GLYSO (Ultraviolet-B-repressible protein OS=Glycine soja OX=3848 GN=D0Y65_013825 PE=4 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.508e-58
Identity = 101/122 (82.79%), Postives = 106/122 (86.89%), Query Frame = 0 
Query:    1 MASASVPTALPPSSV-THNKPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP A   SSV  +NKPSSEAFFRPLPLRQ KRTLFT K +S SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGG +L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMAFSLSSVINNNKPSSEAFFRPLPLRQPKRTLFTTKAVSNSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Match: tr|C6TBW1|C6TBW1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 6.729e-58
Identity = 100/122 (81.97%), Postives = 106/122 (86.89%), Query Frame = 0 
Query:    1 MASASVPTALPPSSV-THNKPSSEAFFRPLPLRQQKRTLFT-KPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MASASVP A   SSV  +NKPSSEAFFRPLPLRQ KRTLFT K ++ SK QINASLKEKAV GLTAAS TASMV+PEVAHAAG +FSPSLKNFLLSIFAGG +L AIFGAVIGVSNFDPVKR
Sbjct:    1 MASASVPMAFSLSSVINNNKPSSEAFFRPLPLRQPKRTLFTTKAVANSKAQINASLKEKAVAGLTAASVTASMVVPEVAHAAGYEFSPSLKNFLLSIFAGGFVLVAIFGAVIGVSNFDPVKR 122
[Close]
BLAST of Cc_v2.0_07080.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2JN82|PSBX_SYNJB (Photosystem II reaction center protein X OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=psbX PE=3 SV=1)

HSP 1 Score: 46.595 bits (109), Expect = 3.244e-7
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0 
Query:   85 SPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            +PSL NFL S+ AG V+LGA+FGA+I VS  D V+R
Sbjct:    2 TPSLANFLWSLVAGAVVLGALFGAIIFVSQRDKVRR 37
[Close]
BLAST of Cc_v2.0_07080.1 vs. Araport11
Match: | (Symbols: PSBX | photosystem II subunit X | chr2:2587868-2588218 REVERSE LENGTH=116)

HSP 1 Score: 97.0561 bits (240), Expect = 5.367e-27
Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 0 
Query:    1 MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQINASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGVLLGAIFGAVIGVSNFDPVKR 120
            MAS S  + + P + T + P    F +PLPL+  K  + T   ++ ++Q+ A   +KA+TG++AA+ TASMVIPE+A AAGS  SPSLKNFLLSI +GG++L  I G V+GVSNFDPVKR
Sbjct:    1 MASTSAMSLVTPLNQTRSSP----FLKPLPLKPSKALVATGGRAQ-RLQVKALKMDKALTGISAAALTASMVIPEIAEAAGSGISPSLKNFLLSIASGGLVLTVIIGVVVGVSNFDPVKR 115
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07080.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151RSQ8|A0A151RSQ8_CAJCA6.306e-79100.00Ultraviolet-B-repressible protein OS=Cajanus cajan... [more]
tr|A0A371EI58|A0A371EI58_MUCPR8.181e-6590.60Ultraviolet-B-repressible protein (Fragment) OS=Mu... [more]
tr|I1JU06|I1JU06_SOYBN1.823e-6085.25Ultraviolet-B-repressible protein OS=Glycine max O... [more]
tr|V7AXB1|V7AXB1_PHAVU2.375e-6082.50Ultraviolet-B-repressible protein OS=Phaseolus vul... [more]
tr|C6SVA3|C6SVA3_SOYBN1.077e-5984.43Ultraviolet-B-repressible protein OS=Glycine max O... [more]
tr|A0A445KWJ2|A0A445KWJ2_GLYSO2.891e-5984.43Ultraviolet-B-repressible protein OS=Glycine soja ... [more]
tr|A0A1S3U5F4|A0A1S3U5F4_VIGRR1.345e-5880.83Uncharacterized protein LOC106762068 OS=Vigna radi... [more]
tr|I1K8F8|I1K8F8_SOYBN2.508e-5882.79Uncharacterized protein OS=Glycine max OX=3847 GN=... [more]
tr|A0A0B2RCP0|A0A0B2RCP0_GLYSO2.508e-5882.79Ultraviolet-B-repressible protein OS=Glycine soja ... [more]
tr|C6TBW1|C6TBW1_SOYBN6.729e-5881.97Uncharacterized protein OS=Glycine max OX=3847 PE=... [more]
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BLAST of Cc_v2.0_07080.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
sp|Q2JN82|PSBX_SYNJB3.244e-761.11Photosystem II reaction center protein X OS=Synech... [more]
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BLAST of Cc_v2.0_07080.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 1
Match NameE-valueIdentityDescription
|5.367e-2751.67Symbols: PSBX | photosystem II subunit X | chr2:25... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.510Single helix bincoord: 84..121
e-value: 4.5E-13
score: 50.7
NoneNo IPR availablePANTHERPTHR34455OS07G0673550 PROTEINcoord: 1..120
IPR009518Photosystem II PsbXPFAMPF06596PsbXcoord: 85..120
e-value: 1.9E-12
score: 58.2

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_07080.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07080.1; Name=Cc_v2.0_07080.1; organism=Cajanus cajan; type=mRNA; length=366bp
ATGGCTTCTGCTTCTGTTCCAACGGCATTACCTCCGAGCTCTGTCACCCA
TAACAAGCCTTCATCCGAAGCCTTCTTCAGGCCATTACCCCTTAGACAAC
AGAAGAGGACCCTCTTTACAAAGCCTCTCTCAAAATCCAAGGTTCAAATT
AATGCATCCTTGAAGGAGAAGGCAGTGACCGGACTCACAGCAGCTTCCTT
CACAGCCTCTATGGTGATTCCGGAGGTGGCTCACGCTGCTGGATCCGATT
TCTCCCCATCACTCAAGAACTTTCTACTCAGCATCTTTGCTGGTGGGGTT
CTGCTAGGAGCCATATTTGGAGCCGTTATTGGAGTTTCCAACTTTGATCC
TGTTAAGAGAGCTTAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07080.1

>drCajCajn.Asha.2.0.Cc_v2.0_07080.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07080.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07080.1; organism=Cajanus cajan; type=polypeptide; length=121bp
MASASVPTALPPSSVTHNKPSSEAFFRPLPLRQQKRTLFTKPLSKSKVQI
NASLKEKAVTGLTAASFTASMVIPEVAHAAGSDFSPSLKNFLLSIFAGGV
LLGAIFGAVIGVSNFDPVKRA
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mRNA from alignment at CcLG03_v2.0:36043843..36044208-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_07080.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07080.1; Name=Cc_v2.0_07080.1; organism=Cajanus cajan; type=mRNA; length=366bp; location=Sequence derived from: CcLG03_v2.0:36043843..36044208- (Cajanus cajan
ATGGCTTCTGCTTCTGTTCCAACGGCATTACCTCCGAGCTCTGTCACCCA
TAACAAGCCTTCATCCGAAGCCTTCTTCAGGCCATTACCCCTTAGACAAC
AGAAGAGGACCCTCTTTACAAAGCCTCTCTCAAAATCCAAGGTTCAAATT
AATGCATCCTTGAAGGAGAAGGCAGTGACCGGACTCACAGCAGCTTCCTT
CACAGCCTCTATGGTGATTCCGGAGGTGGCTCACGCTGCTGGATCCGATT
TCTCCCCATCACTCAAGAACTTTCTACTCAGCATCTTTGCTGGTGGGGTT
CTGCTAGGAGCCATATTTGGAGCCGTTATTGGAGTTTCCAACTTTGATCC
TGTTAAGAGAGCTTAA
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Coding sequence (CDS) from alignment at CcLG03_v2.0:36043843..36044208-

>drCajCajn.Asha.2.0.Cc_v2.0_07080.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07080.1; Name=Cc_v2.0_07080.1; organism=Cajanus cajan; type=CDS; length=366bp; location=Sequence derived from: CcLG03_v2.0:36043843..36044208- (Cajanus cajan
ATGGCTTCTGCTTCTGTTCCAACGGCATTACCTCCGAGCTCTGTCACCCA
TAACAAGCCTTCATCCGAAGCCTTCTTCAGGCCATTACCCCTTAGACAAC
AGAAGAGGACCCTCTTTACAAAGCCTCTCTCAAAATCCAAGGTTCAAATT
AATGCATCCTTGAAGGAGAAGGCAGTGACCGGACTCACAGCAGCTTCCTT
CACAGCCTCTATGGTGATTCCGGAGGTGGCTCACGCTGCTGGATCCGATT
TCTCCCCATCACTCAAGAACTTTCTACTCAGCATCTTTGCTGGTGGGGTT
CTGCTAGGAGCCATATTTGGAGCCGTTATTGGAGTTTCCAACTTTGATCC
TGTTAAGAGAGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR009518PSII_PsbX
Vocabulary: Cellular Component
TermDefinition
GO:0009523photosystem II
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis