Cc_v2.0_07360.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TU07|A0A151TU07_CAJCA (Uncharacterized protein At3g61260 family OS=Cajanus cajan OX=3821 GN=KK1_009757 PE=3 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0 Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGRWETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGRWETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF Sbjct: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGRWETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3TM11|A0A1S3TM11_VIGRR (Remorin 4.1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106756758 PE=3 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 1.936e-133 Identity = 208/264 (78.79%), Postives = 228/264 (86.36%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS-----EGASSSDNFTSMSREFNALVLAGSNIDHDNNV-VSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++S T+ S+ +E +REIHALTP PP PRGR W+TLH+HRSSSLS GASSSDNFT+MSREFNALVLAGS ID D+N ++P+N N NNNL RIRE+ELMEE+NPLAIVPD+HPL+P+PSS GGG EEHVSVQRVKKEEVD KISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 7 IMSSTSHGSEDHEEEDEQVREIHALTPTHPPHPRGRPWDTLHTHRSSSLSVASTDGGASSSDNFTTMSREFNALVLAGSTIDPDSNRNLTPVN--QNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 268
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M852|A0A4D6M852_VIGUN (Remorin OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2155 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 1.510e-132 Identity = 208/264 (78.79%), Postives = 228/264 (86.36%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS-----EGASSSDNFTSMSREFNALVLAGSNIDHDNNV-VSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++ T+ S+ +E +REIHALTP PP PRGR W+TLH+HRSSSLS GASSSDNFT+MSREFNALVLAGS+ID DNN ++P+N N NNNL RIRE+ELMEE+NPLAIVPD+HPL+P+PSS GGG R EEHVSVQRVKKEEVD KISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGR P+KKSFF Sbjct: 7 IMGSTSQGSEDHEEEDEQVREIHALTPTHPPHPRGRPWDTLHTHRSSSLSVASTDGGASSSDNFTTMSREFNALVLAGSSIDPDNNRNLTPVN--QNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGAR--EEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRAPAKKSFF 266
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FGE6|A0A445FGE6_GLYSO (Remorin 4.1 OS=Glycine soja OX=3848 GN=D0Y65_051447 PE=3 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.785e-131 Identity = 209/268 (77.99%), Postives = 231/268 (86.19%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS----EGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNN---LTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGG---GTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++ T S++EDEH+T+IREIHALTPP PPRGR WET+H+HRSSSLS GASSS+NF SMSREF+ALVLAGS+IDHDN+ + N N NN+ L RIREE+LMEE+NPLAIVPD+HPL+P+PSS + G G EEHVSVQRVKKEEVDAKISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 8 IIGSTTHGSEEEDEHITEIREIHALTPP---PPRGRAWETVHTHRSSSLSVASEGGASSSENF-SMSREFSALVLAGSSIDHDNSNNNNSNSPMNENNNSNSLLGRIREEDLMEETNPLAIVPDNHPLDPVPSSSSQGVRGGGAAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 271
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1N920|I1N920_SOYBN (Remorin C-terminal domain-containing protein OS=Glycine max OX=3847 GN=GLYMA_19G141100 PE=3 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 2.785e-131 Identity = 209/268 (77.99%), Postives = 231/268 (86.19%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS----EGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNN---LTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGG---GTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++ T S++EDEH+T+IREIHALTPP PPRGR WET+H+HRSSSLS GASSS+NF SMSREF+ALVLAGS+IDHDN+ + N N NN+ L RIREE+LMEE+NPLAIVPD+HPL+P+PSS + G G EEHVSVQRVKKEEVDAKISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 8 IIGSTTHGSEEEDEHITEIREIHALTPP---PPRGRAWETVHTHRSSSLSVASEGGASSSENF-SMSREFSALVLAGSSIDHDNSNNNNSNSPMNENNNSNSLLGRIREEDLMEETNPLAIVPDNHPLDPVPSSSSQGVRGGGAAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 271
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RXG9|A0A0S3RXG9_PHAAN (Remorin C-terminal domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G280400 PE=3 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 2.337e-130 Identity = 203/257 (78.99%), Postives = 221/257 (85.99%), Query Frame = 0 Query: 3 SHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNV-VSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 SH + +++DE V REIHALTP PP PRGR W+TLH+H S S +SDNFT+MSREFNALVLAGSNID DNN ++P+N N NNNL RIRE+ELMEE+NPLAIVPD+HPL+P+PSS GGG EEHVSVQRVKKEEVD KISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 12 SHGSEDHEEDDEQV---REIHALTPTHPPHPRGRPWDTLHTHSLSVASTDGGASDNFTTMSREFNALVLAGSNIDPDNNRNLTPVN--QNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 263
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L5R5|A0A8T0L5R5_PHAAN (Remorin 4.1 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0049080 PE=3 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 2.337e-130 Identity = 203/257 (78.99%), Postives = 221/257 (85.99%), Query Frame = 0 Query: 3 SHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNV-VSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 SH + +++DE V REIHALTP PP PRGR W+TLH+H S S +SDNFT+MSREFNALVLAGSNID DNN ++P+N N NNNL RIRE+ELMEE+NPLAIVPD+HPL+P+PSS GGG EEHVSVQRVKKEEVD KISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 12 SHGSEDHEEDDEQV---REIHALTPTHPPHPRGRPWDTLHTHSLSVASTDGGASDNFTTMSREFNALVLAGSNIDPDNNRNLTPVN--QNNVNNNLGRIREDELMEETNPLAIVPDNHPLDPVPSSQMGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 263
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RYQ6|A0AA86RYQ6_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS3450 PE=4 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 2.980e-126 Identity = 214/256 (83.59%), Postives = 229/256 (89.45%), Query Frame = 0 Query: 10 DQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS-----EGASSSDNFTSMSREFNALVLAGSNIDHDNN-VVSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGA-EEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++EDEH IREIHALTPPRPPPPRGR W+TLH+HRSSSLS G SSSDNFT+MSREF+ALVLAGS ID DNN ++PIN N NNNL RIREEELMEE+NPLAIVPD+HPL+P+PSS G + GA EEHVSVQRVKKEEVDAKISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP+KKSFF Sbjct: 19 EEEDEH---IREIHALTPPRPPPPRGRPWDTLHTHRSSSLSVASTDGGTSSSDNFTTMSREFSALVLAGSTIDPDNNHSITPIN--ENNVNNNLGRIREEELMEETNPLAIVPDNHPLDPVPSSSVMGASGGAREEHVSVQRVKKEEVDAKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPAKKSFF 269
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371GWN5|A0A371GWN5_MUCPR (Remorin 4.1 (Fragment) OS=Mucuna pruriens OX=157652 GN=REM4.1 PE=3 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 6.931e-124 Identity = 190/238 (79.83%), Postives = 208/238 (87.39%), Query Frame = 0 Query: 22 IHALTPPRPPPPRGR-WETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPIND-GTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 IHALTPP+ P PRGR WETLH+HR SSLS ++ +NFT+MSREFNALVLAGSNIDHDN +SP N+ N NNNL RIREEELMEE+NPLAIVPD+HPL +PS +EHVSVQRVKKEEVDAKISAWQNAK+AK+NNRFKREDAVINGWESEQVQKA+SWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEER+ASAE KRGTKVARVLEIASLM+AVGRPP+KKSFF Sbjct: 22 IHALTPPQAPAPRGRAWETLHTHRPSSLSVASTEGENFTTMSREFNALVLAGSNIDHDN--ISPTNEVHNNNNNNNLGRIREEELMEETNPLAIVPDNHPLNRVPSR---------QEHVSVQRVKKEEVDAKISAWQNAKIAKINNRFKREDAVINGWESEQVQKATSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERKASAEGKRGTKVARVLEIASLMKAVGRPPTKKSFF 248
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CZB0|V7CZB0_PHAVU (Remorin C-terminal domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G135500g PE=3 SV=1) HSP 1 Score: 356.681 bits (914), Expect = 2.057e-121 Identity = 207/263 (78.71%), Postives = 225/263 (85.55%), Query Frame = 0 Query: 1 MLSHTNTSSDQEDEHVTDIREIHALTPPRPPPPRGR-WETLHSHRSSSLS-----EGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 ++ T+ S+ +E +REIHALTPP PPPPRGR W+T+H+HRSSSLS G SSSDNFT+MSREF+ALVLAGS ID DNN +P N NNNL RIREEELMEE+NPLAIVPD+HPL+PLPSS GGG EEHVSVQRVKKEEVD KISAWQNAKVAK+NNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLM+AVGRPP+KKSFF Sbjct: 7 VIVSTSQGSENHEEEDEQVREIHALTPPHPPPPRGRPWDTIHTHRSSSLSVASTDGGTSSSDNFTTMSREFSALVLAGSTIDPDNNH-NPTPINQNNVNNNLGRIREEELMEETNPLAIVPDNHPLDPLPSSVRGGGGGAREEHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMKAVGRPPAKKSFF 268
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P93758|RMR42_ARATH (Remorin 4.2 OS=Arabidopsis thaliana OX=3702 GN=REM4.2 PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 8.465e-88 Identity = 143/264 (54.17%), Postives = 194/264 (73.48%), Query Frame = 0 Query: 7 TSSDQEDEHVTDIREIHALTP-----------PRPPPPRGRWETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREE-ELMEESNPLAIVPDSHPLEPL-PSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 TS+D+++ T +RE+HALTP PPPP R ++++SEG +NFT++SREFNALV+AGS+++++ + + + + L RI E+ + EE+NPLAIVPD +P L P S G G + +VQRVK+EEV+AKI+AWQ AK+AK+NNRFKREDAVINGW +EQV KA+SWMKK+ERKLEE++A+AMEK QN++AKA RKAEERRA+AEAKRGT+VA+V+E+A+LMRA+GRPP+K+SFF Sbjct: 14 TSNDRDETPETVVREVHALTPAPEDNSRTMTATLPPPPAFRGYFSPPRSATTMSEG----ENFTTISREFNALVIAGSSMENNELMTRDVTQREDERQDELMRIHEDTDHEEETNPLAIVPDQYPGSGLDPGSDNGPGQ--SRVGSTVQRVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPPAKRSFF 271
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q93YN8|RMR41_ARATH (Remorin 4.1 OS=Arabidopsis thaliana OX=3702 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 6.263e-83 Identity = 147/285 (51.58%), Postives = 193/285 (67.72%), Query Frame = 0 Query: 3 SHTNTSSDQEDEHVTD---IREIHALTPP----RPPPPRGRWETLHSHRSSSLSEGASSS-DNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAAN----------NNLTRIREEELM--------EESNPLAIVPDSHPLEPLPSSH----AGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 + T +SD+ DE + +R+IHA+T RP L RS + S+G +SS +NFT++SREFNALV+AGS++D+++N GTN + N LTRI E + + E+SNP AIVPD + ++ + GG SVQRVK+EEV+AKI+AWQ AKVAK+NNRFKR+DAVINGW +EQV +A+SWMKK+ERKLE++RA+AMEK QN +AKA RKAEERRA+AE KRGT+VARVLE+A+LMRAVGRPP+K+SFF Sbjct: 16 TSTTDASDRRDETPSSEIVVRDIHAMTTTTELTRPQQRGSGGGYLSPSRSIAFSDGTTSSGENFTTVSREFNALVIAGSSMDNNSN-------GTNQSGGHRDVIRDERNELTRIGENDDVGDHGQVPEEDSNPWAIVPDDYNNRDGSENNIVLASSGGQNRMVTTASVQRVKREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLEVANLMRAVGRPPAKRSFF 293
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q7XII4|REM41_ORYSJ (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.868e-73 Identity = 135/236 (57.20%), Postives = 171/236 (72.46%), Query Frame = 0 Query: 37 WETLHSHRSSSLSEGASS---SDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAA-NNNLTRIREEELMEESNPLAIVPDSHPLE---------PLPS--SHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 WE+ R +S+ S S+ F +MSREF+A+V A +N + + D + A ++ L RI E+EL EE+NPLAIVPDS+P+ P P S AGGG + VSV +VKKEEV++KI+AWQ A+VAKVNNRFKRE+ VINGWE +QV+KA++W+KK ERKLEEKRA+AMEK QN++AKA RKAEE+RASAEAKRGTKVARVLE+A+ MRAVGR PSK+SFF Sbjct: 85 WESAAGSRHTSIRSVGSDTAPSELFPTMSREFSAMVAAAANANAAAAAAANGGDSSRAGVDDALGRIGEDEL-EETNPLAIVPDSNPIPSPRRAHLALPAPGDVSSAGGGH---GDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANAWLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFMRAVGRAPSKRSFF 316
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FFA5|RMR14_ARATH (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.127e-16 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 143 RVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSK 253 RV+ E+ + I AW+ A+ KV N+ +++ + I WE+ + + +KK+E +LE+K+A +E+M+N IA+ H++AEE+RA EAKRG ++ + E+A+ RA G P K Sbjct: 87 RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKK 197
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.956e-15 Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 0 Query: 101 EEELMEESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSK 253 E+E ++S L +V P EP G R A + RV E+ + I AW+ ++ +K N+ +++ + I WE+ + + +KK+E +LE+K+A EKM+N IA H++AEE+RA EAKRG + + E+A+ RA G P K Sbjct: 46 EKEKPDDSKALVVVETKAP-EPADEKKEGSIDRDA----VLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK 193
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.099e-14 Identity = 49/151 (32.45%), Postives = 87/151 (57.62%), Query Frame = 0 Query: 102 EELMEESNPLAIVPDSHPLE-PLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP 251 E++ ++S L +V P+E P P+ A + V + + KE+ + + AW+ ++ +K N+ +++ A ++ WE+ + + +KK+E +LE+K+A E+M+N +A H++AEERRA EAKRG V + E A+ RA G P Sbjct: 60 EQIFDDSKALTVV--EKPVEEPAPAKPASASL---DRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVP 205
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.256e-9 Identity = 48/145 (33.10%), Postives = 86/145 (59.31%), Query Frame = 0 Query: 107 ESNPLAIVPDSHPLEPLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP 251 ES LA+V P+E A G+ A+ V + ++KE+ + I AW+ ++ +K NR +++ + ++ WE+ + + ++K+E KLE+K+A+ EKM+N +A H+ AEE+RA EAK+G ++ + E+ + RA G P Sbjct: 43 ESKALAVV--EKPIEEHTPKKASSGS--ADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVP 183
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: REM4.2, AtREM4.2 | remorin group 4 2 | chr2:17471119-17472519 REVERSE LENGTH=274) HSP 1 Score: 265.003 bits (676), Expect = 8.839e-89 Identity = 143/264 (54.17%), Postives = 194/264 (73.48%), Query Frame = 0 Query: 7 TSSDQEDEHVTDIREIHALTP-----------PRPPPPRGRWETLHSHRSSSLSEGASSSDNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAANNNLTRIREE-ELMEESNPLAIVPDSHPLEPL-PSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 TS+D+++ T +RE+HALTP PPPP R ++++SEG +NFT++SREFNALV+AGS+++++ + + + + L RI E+ + EE+NPLAIVPD +P L P S G G + +VQRVK+EEV+AKI+AWQ AK+AK+NNRFKREDAVINGW +EQV KA+SWMKK+ERKLEE++A+AMEK QN++AKA RKAEERRA+AEAKRGT+VA+V+E+A+LMRA+GRPP+K+SFF Sbjct: 14 TSNDRDETPETVVREVHALTPAPEDNSRTMTATLPPPPAFRGYFSPPRSATTMSEG----ENFTTISREFNALVIAGSSMENNELMTRDVTQREDERQDELMRIHEDTDHEEETNPLAIVPDQYPGSGLDPGSDNGPGQ--SRVGSTVQRVKREEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAMEKTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPPAKRSFF 271
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: AtREM4.1, REM4.1 | remorin group 4 1 | chr3:21301623-21302924 REVERSE LENGTH=296) HSP 1 Score: 253.447 bits (646), Expect = 6.533e-84 Identity = 147/285 (51.58%), Postives = 193/285 (67.72%), Query Frame = 0 Query: 3 SHTNTSSDQEDEHVTD---IREIHALTPP----RPPPPRGRWETLHSHRSSSLSEGASSS-DNFTSMSREFNALVLAGSNIDHDNNVVSPINDGTNAAN----------NNLTRIREEELM--------EESNPLAIVPDSHPLEPLPSSH----AGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSFF 257 + T +SD+ DE + +R+IHA+T RP L RS + S+G +SS +NFT++SREFNALV+AGS++D+++N GTN + N LTRI E + + E+SNP AIVPD + ++ + GG SVQRVK+EEV+AKI+AWQ AKVAK+NNRFKR+DAVINGW +EQV +A+SWMKK+ERKLE++RA+AMEK QN +AKA RKAEERRA+AE KRGT+VARVLE+A+LMRAVGRPP+K+SFF Sbjct: 16 TSTTDASDRRDETPSSEIVVRDIHAMTTTTELTRPQQRGSGGGYLSPSRSIAFSDGTTSSGENFTTVSREFNALVIAGSSMDNNSN-------GTNQSGGHRDVIRDERNELTRIGENDDVGDHGQVPEEDSNPWAIVPDDYNNRDGSENNIVLASSGGQNRMVTTASVQRVKREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLEDRRAKAMEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLEVANLMRAVGRPPAKRSFF 293
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011624 REVERSE LENGTH=229) HSP 1 Score: 78.5666 bits (192), Expect = 3.798e-17 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 143 RVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSK 253 RV+ E+ + I AW+ A+ KV N+ +++ + I WE+ + + +KK+E +LE+K+A +E+M+N IA+ H++AEE+RA EAKRG ++ + E+A+ RA G P K Sbjct: 114 RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKK 224
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=202) HSP 1 Score: 77.0258 bits (188), Expect = 8.371e-17 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 143 RVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSK 253 RV+ E+ + I AW+ A+ KV N+ +++ + I WE+ + + +KK+E +LE+K+A +E+M+N IA+ H++AEE+RA EAKRG ++ + E+A+ RA G P K Sbjct: 87 RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKK 197
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:18142863-18144163 REVERSE LENGTH=175) HSP 1 Score: 76.2554 bits (186), Expect = 8.823e-17 Identity = 41/106 (38.68%), Postives = 68/106 (64.15%), Query Frame = 0 Query: 153 ISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKK-SFF 257 I AW+ A+ +KV N+ +++ + + WE+ + + +KK+E +L +K+A E+M+N IA+ H++AEE+RA EAKRG V + E+A+ RA G P+K FF Sbjct: 70 IKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:8010004-8011453 REVERSE LENGTH=201) HSP 1 Score: 76.6406 bits (187), Expect = 1.128e-16 Identity = 43/111 (38.74%), Postives = 73/111 (65.77%), Query Frame = 0 Query: 143 RVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSK 253 RV+ E+ + I AW+ A+ KV N+ +++ + I WE+ + + +KK+E +LE+K+A +E+M+N IA+ H++AEE+RA EAKRG ++ + E+A+ RA G P K Sbjct: 86 RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKK 196
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:25333137-25334472 REVERSE LENGTH=347) HSP 1 Score: 77.7962 bits (190), Expect = 2.200e-16 Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0 Query: 149 VDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSF 256 ++A+ AW A+ AK R+KRE+ I WE+ + +KA MKK+E K E +ARA EK+ N +A R AEERRA+AEAK K + E A +R G PS SF Sbjct: 229 MEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRKAEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIRRSGHLPSSFSF 336
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: REM1.2 | REMORIN 1.2 | chr3:22675403-22676701 REVERSE LENGTH=212) HSP 1 Score: 73.9442 bits (180), Expect = 1.131e-15 Identity = 49/151 (32.45%), Postives = 87/151 (57.62%), Query Frame = 0 Query: 102 EELMEESNPLAIVPDSHPLE-PLPSSHAGGGTRGAEEHVSVQRVKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPP 251 E++ ++S L +V P+E P P+ A + V + + KE+ + + AW+ ++ +K N+ +++ A ++ WE+ + + +KK+E +LE+K+A E+M+N +A H++AEERRA EAKRG V + E A+ RA G P Sbjct: 60 EQIFDDSKALTVV--EKPVEEPAPAKPASASL---DRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAAKYRATGIVP 205
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:10680348-10682852 FORWARD LENGTH=509) HSP 1 Score: 70.0922 bits (170), Expect = 1.527e-13 Identity = 38/109 (34.86%), Postives = 67/109 (61.47%), Query Frame = 0 Query: 144 VKKEEVDAKISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPS 252 +K E + + +AW+ A+ +K N R+KRE+ I WES++ K + M+++E K+E+ +A A K+ IA A +++EE+RA AEA++ + + A +R GR P+ Sbjct: 390 AQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAKLEAEMRRIEAKVEQMKAEAEAKIMKKIALAKQRSEEKRALAEARKTRDAEKAVAEAQYIRETGRIPA 498
BLAST of Cc_v2.0_07360.1 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:278434-279170 REVERSE LENGTH=123) HSP 1 Score: 64.6994 bits (156), Expect = 4.670e-13 Identity = 33/104 (31.73%), Postives = 63/104 (60.58%), Query Frame = 0 Query: 153 ISAWQNAKVAKVNNRFKREDAVINGWESEQVQKASSWMKKVERKLEEKRARAMEKMQNDIAKAHRKAEERRASAEAKRGTKVARVLEIASLMRAVGRPPSKKSF 256 I AW+ K+ KVNN+ +++ I+GWE ++ K S + +++RK++ K+ EK++N+ A H KA++++A + +R ++ E A+ +A G+ P K S Sbjct: 17 IKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQRKMDSKKMEKSEKLRNEKAAVHAKAQKKKADVQTRRAQEILDAEEAAARFQAAGKIPKKSSL 120 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07360.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07360.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 7 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07360.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_07360.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07360.1; Name=Cc_v2.0_07360.1; organism=Cajanus cajan; type=mRNA; length=774bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07360.1 >drCajCajn.Asha.2.0.Cc_v2.0_07360.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07360.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07360.1; organism=Cajanus cajan; type=polypeptide; length=257bpback to top mRNA from alignment at CcLG03_v2.0:39660575..39663905- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_07360.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07360.1; Name=Cc_v2.0_07360.1; organism=Cajanus cajan; type=mRNA; length=3331bp; location=Sequence derived from: CcLG03_v2.0:39660575..39663905- (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG03_v2.0:39660575..39663905- >drCajCajn.Asha.2.0.Cc_v2.0_07360.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07360.1; Name=Cc_v2.0_07360.1; organism=Cajanus cajan; type=CDS; length=774bp; location=Sequence derived from: CcLG03_v2.0:39660575..39663905- (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|