Cc_v2.0_07391.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TU14|A0A151TU14_CAJCA (Protein POLYCHOME OS=Cajanus cajan OX=3821 GN=KK1_009792 PE=4 SV=1) HSP 1 Score: 443.351 bits (1139), Expect = 2.891e-156 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LBS7|A0A445LBS7_GLYSO (Protein POLYCHOME OS=Glycine soja OX=3848 GN=D0Y65_007135 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 2.409e-84 Identity = 160/233 (68.67%), Postives = 178/233 (76.39%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTP---AAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEG-ESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MP+SRDRR+ DLAA ARRRA+ I+ D PP RTP AA R RA + GS+NTPPS + RRGR RVPSR++LP WYPRTPLRDIT VV+AIERRRAR GE +GQR + PA +L+ E S+PASA SA+KSPKSVGVKLRTP GSK PK+FLDIS+LPE ESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPESRDRRIT-VVDLAAAIARRRASFIYIDS--PPLRTPQRTAAIGRGRASGSPGSQNTPPS-TARRGRGRVPSRNVLPAWYPRTPLRDITVVVQAIERRRARSGEAEGQRIGSTDPASDRLVTEPSEPASAD--------------SAVKSPKSVGVKLRTPFGSKVPKIFLDISELPEDDESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 215
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JNH4|I1JNH4_SOYBN (Protein POLYCHOME OS=Glycine max OX=3847 GN=100816760 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 2.409e-84 Identity = 160/233 (68.67%), Postives = 178/233 (76.39%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTP---AAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEG-ESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MP+SRDRR+ DLAA ARRRA+ I+ D PP RTP AA R RA + GS+NTPPS + RRGR RVPSR++LP WYPRTPLRDIT VV+AIERRRAR GE +GQR + PA +L+ E S+PASA SA+KSPKSVGVKLRTP GSK PK+FLDIS+LPE ESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPESRDRRIT-VVDLAAAIARRRASFIYIDS--PPLRTPQRTAAIGRGRASGSPGSQNTPPS-TARRGRGRVPSRNVLPAWYPRTPLRDITVVVQAIERRRARSGEAEGQRIGSTDPASDRLVTEPSEPASAD--------------SAVKSPKSVGVKLRTPFGSKVPKIFLDISELPEDDESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 215
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1N949|I1N949_SOYBN (Protein POLYCHOME OS=Glycine max OX=3847 GN=100805575 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 3.331e-77 Identity = 149/232 (64.22%), Postives = 171/232 (73.71%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSP--PPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPE-GESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSR RRV DLAA ARRR + IF++ PPRT AA R RA + S+N PPS + RRGR RVP RS+LP W+PRTPLRDITAVV+AIERR ARLGE +GQR N PA +L+ S + +++++ SA+KSPKSVGVKLRTP GSK PK+FLDIS+LPE ESE LTPQKKLL+NIDQVEEAVREEL KLKRTPSAKK EREKRVRTLMSMR
Sbjct: 1 MPQSRHRRVT-VVDLAASLARRRVSFIFNEAPTLRTPPRT-AAFGRGRARASPRSQNIPPS-TARRGRGRVPLRSVLPAWFPRTPLRDITAVVQAIERRSARLGEVEGQRIGNTDPASDRLV-----------SEPSEPASASASASAVKSPKSVGVKLRTPFGSKVPKIFLDISELPEHDESEALTPQKKLLDNIDQVEEAVREELNKLKRTPSAKKTEREKRVRTLMSMR 218
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0R0EM47|A0A0R0EM47_SOYBN (Protein POLYCHOME OS=Glycine max OX=3847 GN=100805575 PE=4 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 3.407e-77 Identity = 149/232 (64.22%), Postives = 171/232 (73.71%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSP--PPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPE-GESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSR RRV DLAA ARRR + IF++ PPRT AA R RA + S+N PPS + RRGR RVP RS+LP W+PRTPLRDITAVV+AIERR ARLGE +GQR N PA +L+ S + +++++ SA+KSPKSVGVKLRTP GSK PK+FLDIS+LPE ESE LTPQKKLL+NIDQVEEAVREEL KLKRTPSAKK EREKRVRTLMSMR
Sbjct: 1 MPQSRHRRVT-VVDLAASLARRRVSFIFNEAPTLRTPPRT-AAFGRGRARASPRSQNIPPS-TARRGRGRVPLRSVLPAWFPRTPLRDITAVVQAIERRSARLGEVEGQRIGNTDPASDRLV-----------SEPSEPASASASASAVKSPKSVGVKLRTPFGSKVPKIFLDISELPEHDESEALTPQKKLLDNIDQVEEAVREELNKLKRTPSAKKTEREKRVRTLMSMR 218
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FGG0|A0A445FGG0_GLYSO (Protein POLYCHOME (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_051479 PE=4 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.616e-76 Identity = 149/232 (64.22%), Postives = 171/232 (73.71%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSP--PPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPE-GESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSR RRV DLAA ARRR + IF++ PPRT AA R RA + S+N PPS + RRGR RVP RS+LP W+PRTPLRDITAVV+AIERR ARLGE +GQR N PA +L+ S + +++++ SA+KSPKSVGVKLRTP GSK PK+FLDIS+LPE ESE LTPQKKLL+NIDQVEEAVREEL KLKRTPSAKK EREKRVRTLMSMR
Sbjct: 67 MPQSRHRRVT-VVDLAASLARRRVSFIFNEAPTLRTPPRT-AAFGRGRARASPRSQNIPPS-TARRGRGRVPLRSVLPAWFPRTPLRDITAVVQAIERRSARLGEVEGQRIGNTDPASDRLV-----------SEPSEPASASASASAVKSPKSVGVKLRTPFGSKVPKIFLDISELPEHDESEALTPQKKLLDNIDQVEEAVREELNKLKRTPSAKKTEREKRVRTLMSMR 284
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|V7CVZ0|V7CVZ0_PHAVU (Protein POLYCHOME OS=Phaseolus vulgaris OX=3885 GN=PHAVU_001G138700g PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 1.576e-72 Identity = 157/229 (68.56%), Postives = 170/229 (74.24%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSRDRRV P DLAA FAR RA I++D P R R+ GSENTPPS RR R RVPSRSLLP WYPRTPLRDITA+ RAIERRRARLGE +GQRTE+ V Q++ S +ASAS S+ KSPKSVGVKLRTPLG K PK++LDISDLPEGESETLTPQKKLLNNIDQV+EAV EELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPQSRDRRVTPV-DLAASFARNRAFFIYNDPPPHRTPP-RTLPRGRSRAFLGSENTPPSA--RRSRARVPSRSLLPAWYPRTPLRDITAIARAIERRRARLGEVEGQRTESTVSTADQVV------------LEPSEAASASAASSSKSPKSVGVKLRTPLGCKVPKIYLDISDLPEGESETLTPQKKLLNNIDQVQEAVLEELKKLKRTPSAKKAEREKRVRTLMSMR 213
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3RXJ3|A0A0S3RXJ3_PHAAN (Protein POLYCHOME OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G283800 PE=4 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.191e-69 Identity = 158/229 (69.00%), Postives = 174/229 (75.98%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSRDRR L + DLAA FAR RA LI++D P R RA GSENTPPS RR R RV SRSLLP WYPRTPLRDITAV RAIERRRARLGE +GQRTE+ V Q++ E S+ ASASA++++ KSPKSVGVKLRTPLG K PK++LDIS+LPEGESETLTPQKKLLNNIDQV+EAV EELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPQSRDRR-LTSVDLAAAFARNRAFLIYNDPPPHRTPP-RTLPRGRARAFLGSENTPPSA--RRTRGRVSSRSLLPAWYPRTPLRDITAVARAIERRRARLGEVEGQRTESTVSTADQVVLEPSETASASAASTS------------KSPKSVGVKLRTPLGCKVPKIYLDISELPEGESETLTPQKKLLNNIDQVQEAVLEELKKLKRTPSAKKAEREKRVRTLMSMR 213
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9U7M2|A0A0L9U7M2_PHAAN (Protein POLYCHOME Protein UV-B-INSENSITIVE 4 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0049370 PE=4 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.191e-69 Identity = 158/229 (69.00%), Postives = 174/229 (75.98%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSRDRR L + DLAA FAR RA LI++D P R RA GSENTPPS RR R RV SRSLLP WYPRTPLRDITAV RAIERRRARLGE +GQRTE+ V Q++ E S+ ASASA++++ KSPKSVGVKLRTPLG K PK++LDIS+LPEGESETLTPQKKLLNNIDQV+EAV EELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPQSRDRR-LTSVDLAAAFARNRAFLIYNDPPPHRTPP-RTLPRGRARAFLGSENTPPSA--RRTRGRVSSRSLLPAWYPRTPLRDITAVARAIERRRARLGEVEGQRTESTVSTADQVVLEPSETASASAASTS------------KSPKSVGVKLRTPLGCKVPKIYLDISELPEGESETLTPQKKLLNNIDQVQEAVLEELKKLKRTPSAKKAEREKRVRTLMSMR 213
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RRC3|A0AA86RRC3_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS3413 PE=4 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 1.139e-66 Identity = 156/229 (68.12%), Postives = 170/229 (74.24%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHDHSPPPPRTPAAASRARALHARGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MPQSRDRRV P DLAA FAR RA I++D P A R RA GSENTPPS RR R R+ SRSLLP WYPRTPLRDITAV RAIERRRARLGE +GQR E+ V QL+ E S+PASAS ++S+ + S VGVKLRTPLG K PK++LDISDLPEGESETLTPQKKLLNNIDQV+EAV EELKKLKRTPSAKKAEREKRVRTLMSMR
Sbjct: 1 MPQSRDRRVTPV-DLAAAFARNRAFFIYNDPPPQRTPPRTLA-RGRARAFLGSENTPPS--TRRTRGRIHSRSLLPAWYPRTPLRDITAVARAIERRRARLGEVEGQRIESTVSTADQLVLESSEPASASGASSSKSPKS------------VGVKLRTPLGCKVPKIYLDISDLPEGESETLTPQKKLLNNIDQVQEAVFEELKKLKRTPSAKKAEREKRVRTLMSMR 213
BLAST of Cc_v2.0_07391.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O48533|PYM_ARATH (Protein POLYCHOME OS=Arabidopsis thaliana OX=3702 GN=PYM PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.486e-42 Identity = 87/170 (51.18%), Postives = 107/170 (62.94%), Query Frame = 0 Query: 60 GSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
G RRGR R S S+LP WYPRTPLRDI+AVVRAIERRRAR+GE G+ E P Q +L L + A S + K P P +K ++ LDI+ GE + LTP+KKLLN+ID+VE+ V EE++K+K TPSAK+AEREKRVRTLMSMR
Sbjct: 99 GVTRRGRARA-SNSVLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTPGPSI-GFKRPWP-------PSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259
BLAST of Cc_v2.0_07391.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M2R1|GIG1_ARATH (Protein GIGAS CELL1 OS=Arabidopsis thaliana OX=3702 GN=GIG1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 9.476e-35 Identity = 104/261 (39.85%), Postives = 131/261 (50.19%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHD---------HSPPPPRTPAAA---------------SRARALHA-----RGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRR-ARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGS-KAPKVFLDIS-DLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MP++RDR P D + IFA RR I D SP P + R H +G EN P + RRGR LLP WYPRTPLRDIT +VRAIERRR A G D G+ E +P Q + L P S + S + SVG K P + K K+ LDI+ ++ E E+ +TP+KKLLN+ID+VE+ V E++KLK TP AK+ EREKRVRTLM+MR
Sbjct: 1 MPEARDRTERPV-DYSTIFANRRRHGILLDEPDSRLSLIESPVNPDIGSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQGRENMPIV-TARRGR----GGGLLPSWYPRTPLRDITHIVRAIERRRGAGTGGDDGRVIE--IPTHRQ-VGVLESPVPLSGE---------HKCSMVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKSTPQAKREEREKRVRTLMTMR 243
BLAST of Cc_v2.0_07391.1 vs. Araport11
Match: | (Symbols: PYM, UVI4 | UV-B-INSENSITIVE 4, POLYCHOME | chr2:17602240-17603283 REVERSE LENGTH=259) HSP 1 Score: 146.747 bits (369), Expect = 8.806e-43 Identity = 87/170 (51.18%), Postives = 107/170 (62.94%), Query Frame = 0 Query: 60 GSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
G RRGR R S S+LP WYPRTPLRDI+AVVRAIERRRAR+GE G+ E P Q +L L + A S + K P P +K ++ LDI+ GE + LTP+KKLLN+ID+VE+ V EE++K+K TPSAK+AEREKRVRTLMSMR
Sbjct: 99 GVTRRGRARA-SNSVLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTPGPSI-GFKRPWP-------PSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259
BLAST of Cc_v2.0_07391.1 vs. Araport11
Match: | (Symbols: PYM, UVI4 | UV-B-INSENSITIVE 4, POLYCHOME | chr2:17602240-17603283 REVERSE LENGTH=259) HSP 1 Score: 146.747 bits (369), Expect = 8.806e-43 Identity = 87/170 (51.18%), Postives = 107/170 (62.94%), Query Frame = 0 Query: 60 GSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRRARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGSKAPKVFLDISDLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
G RRGR R S S+LP WYPRTPLRDI+AVVRAIERRRAR+GE G+ E P Q +L L + A S + K P P +K ++ LDI+ GE + LTP+KKLLN+ID+VE+ V EE++K+K TPSAK+AEREKRVRTLMSMR
Sbjct: 99 GVTRRGRARA-SNSVLPSWYPRTPLRDISAVVRAIERRRARMGEGVGRDIETPTPQQLGVLDSLVPLSGAHLEHDYSMVTPGPSI-GFKRPWP-------PSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAEREKRVRTLMSMR 259
BLAST of Cc_v2.0_07391.1 vs. Araport11
Match: | (Symbols: UVI4-LIKE, GIG1, OSD1 | GIGAS CELL 1, UV-B-insensitive 4-like, OMISSION OF SECOND DIVISION | chr3:21426733-21427821 FORWARD LENGTH=243) HSP 1 Score: 127.872 bits (320), Expect = 9.822e-36 Identity = 104/261 (39.85%), Postives = 131/261 (50.19%), Query Frame = 0 Query: 1 MPQSRDRRVLPAEDLAAIFARRRAALIFHD---------HSPPPPRTPAAA---------------SRARALHA-----RGSENTPPSGSVRRGRPRVPSRSLLPPWYPRTPLRDITAVVRAIERRR-ARLGEDQGQRTENAVPAQTQLLPELSQPASASASASASASASASRVSALKSPKSVGVKLRTPLGS-KAPKVFLDIS-DLPEGESETLTPQKKLLNNIDQVEEAVREELKKLKRTPSAKKAEREKRVRTLMSMR 229
MP++RDR P D + IFA RR I D SP P + R H +G EN P + RRGR LLP WYPRTPLRDIT +VRAIERRR A G D G+ E +P Q + L P S + S + SVG K P + K K+ LDI+ ++ E E+ +TP+KKLLN+ID+VE+ V E++KLK TP AK+ EREKRVRTLM+MR
Sbjct: 1 MPEARDRTERPV-DYSTIFANRRRHGILLDEPDSRLSLIESPVNPDIGSIGGTGGLVRGNFTTWRPGNGRGGHTPFRLPQGRENMPIV-TARRGR----GGGLLPSWYPRTPLRDITHIVRAIERRRGAGTGGDDGRVIE--IPTHRQ-VGVLESPVPLSGE---------HKCSMVTPGPSVGFKRSCPPSTAKVQKMLLDITKEIAEEEAGFITPEKKLLNSIDKVEKIVMAEIQKLKSTPQAKREEREKRVRTLMTMR 243 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07391.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07391.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 2 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_07391.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_07391.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07391.1; Name=Cc_v2.0_07391.1; organism=Cajanus cajan; type=mRNA; length=780bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07391.1 >drCajCajn.Asha.2.0.Cc_v2.0_07391.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07391.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07391.1; organism=Cajanus cajan; type=polypeptide; length=259bpback to top mRNA from alignment at CcLG03_v2.0:40136406..40138187+ Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_07391.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07391.1; Name=Cc_v2.0_07391.1; organism=Cajanus cajan; type=mRNA; length=1782bp; location=Sequence derived from: CcLG03_v2.0:40136406..40138187+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG03_v2.0:40136406..40138187+ >drCajCajn.Asha.2.0.Cc_v2.0_07391.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07391.1; Name=Cc_v2.0_07391.1; organism=Cajanus cajan; type=CDS; length=780bp; location=Sequence derived from: CcLG03_v2.0:40136406..40138187+ (Cajanus cajanback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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