Cc_v2.0_07412.1

Transcript Overview
NameCc_v2.0_07412.1
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_07412.1
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length1029
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG03_v2.0chromosomeCcLG03_v2.0:40393268..40397059 +Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
anccaL0401Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL381Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL450Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0613Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL0833Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL177Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccapsR328Pisum sativum Cameor genome v1aPisum sativum
ccapsR332Pisum sativum Cameor genome v1aPisum sativum
carccaL283Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR305Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccapvR344Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavrvR373Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR329Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR388Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR361Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavssR365Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR399Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavuR259Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR333Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR319Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR414Vigna umbellata FF25 genome v1.0Vigna umbellata
ccccaL0962Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR226Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR343Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR272Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR397Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Orthologs
Gene/TranscriptAssemblySpecies
Vigun01g123700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Va03G066990.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg32819.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_04G02037.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr01.931Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigun01g123700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat3g068840.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_022778945.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.5g113040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.001G141800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
rna-KK1_009823Cajanus cajan Asha genome v1.0Cajanus cajan
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_07412drCajCajn.Asha.2.0.Cc_v2.0_07412Cajanus cajangene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_2Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_3Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_4Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_5Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_6Cajanus cajanCDS
cds.Cc_v2.0_07412.1drCajCajn.Asha.2.0.cds.Cc_v2.0_07412.1_7Cajanus cajanCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_07412.1.exon1drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon1Cajanus cajanexon
Cc_v2.0_07412.1.exon2drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon2Cajanus cajanexon
Cc_v2.0_07412.1.exon3drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon3Cajanus cajanexon
Cc_v2.0_07412.1.exon4drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon4Cajanus cajanexon
Cc_v2.0_07412.1.exon5drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon5Cajanus cajanexon
Cc_v2.0_07412.1.exon6drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon6Cajanus cajanexon
Cc_v2.0_07412.1.exon7drCajCajn.Asha.2.0.Cc_v2.0_07412.1.exon7Cajanus cajanexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_07412.1drCajCajn.Asha.2.0.Cc_v2.0_07412.1Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_07412.1drCajCajn.Asha.2.0.Cc_v2.0_07412.1-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TU71|A0A151TU71_CAJCA (Non-structural maintenance of chromosomes element 4 OS=Cajanus cajan OX=3821 GN=KK1_009823 PE=3 SV=1)

HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0
Identity = 342/342 (100.00%), Postives = 342/342 (100.00%), Query Frame = 0 
Query:    1 MIAVKRELVDDGDSSSIDKHDGPELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYAGSHETMPTATKVLGTIQ 342
            MIAVKRELVDDGDSSSIDKHDGPELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYAGSHETMPTATKVLGTIQ
Sbjct:    1 MIAVKRELVDDGDSSSIDKHDGPELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYAGSHETMPTATKVLGTIQ 342
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FLR1|A0A371FLR1_MUCPR (Non-structural maintenance of chromosomes element 4 (Fragment) OS=Mucuna pruriens OX=157652 GN=NSE4A PE=3 SV=1)

HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0
Identity = 277/373 (74.26%), Postives = 295/373 (79.09%), Query Frame = 0 
Query:    1 MIAVKREL--VDDGDSSSIDKHDGPELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQL-----------------------------------VSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYAGSHETMPTATK 336
            MI VKREL    D DSSSI +H   EL  ADYQTPKGRRGIRSRYLAV NMIHD ++EIARPDS KFD IF+EMESLHQ+                                   ++KPREQVADAKALLDITQSLVMSV+ +A GGLTPS+FVTHILKKFGG GG  N  +DCS+NSVAWKDIGVAVSHV R GCGC TMIGPMDAK+KQRKVIN RK VRP ELARPE LGG SGEERTETDK+MLTMFNILR NKVVKLENLVLNR SFAQTVENLFALSFLVRDGRAEIKVNEAGWQLV PRNAPAANA+LSR+V+FSHFVFRFDF DWKLM RSV VGEELMPHRN QSQ Q AV A SHETMPT T+
Sbjct:    1 MILVKRELDAAGDADSSSITEHHS-ELHAADYQTPKGRRGIRSRYLAVKNMIHDGRDEIARPDSHKFDLIFSEMESLHQIAKMIPNVSPVLLTRFPLFLISKFCCSSRCFLLSHHITKPREQVADAKALLDITQSLVMSVRTIANGGLTPSDFVTHILKKFGGHGGPSNRTEDCSRNSVAWKDIGVAVSHVLRGGCGCYTMIGPMDAKIKQRKVINGRKRVRPAELARPEELGGGSGEERTETDKHMLTMFNILRTNKVVKLENLVLNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVLPRNAPAANAVLSRDVSFSHFVFRFDFKDWKLMVRSVEVGEELMPHRNIQSQYQCAVSAESHETMPTTTE 372
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|I1JNK0|I1JNK0_SOYBN (Non-structural maintenance of chromosomes element 4 OS=Glycine max OX=3847 GN=100781485 PE=3 SV=1)

HSP 1 Score: 518.85 bits (1335), Expect = 0.000e+0
Identity = 248/296 (83.78%), Postives = 270/296 (91.22%), Query Frame = 0 
Query:   30 YQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYA 325
            +QTPKGRRGIRSRYL+V NMIHDE+EEIAR DS KF+ IFNEME+LHQLV+KPREQVADAKALLDITQSLVMSVKN+A+GGLTPS+FVTHILKKFGGQ G  N  +D S+NSVAWKDIGVAVS VFR GCGC TMIG MDAK+KQRKV NRRK VRPTELARP+ LGG SGEERTETDK+M+TMFNILRINK VKLENL+LNR SFAQTVENLFALSFLVRDGRAEIKVNEAGW LVSPRNAPAAN+++SR+VAFSHFVFRFDFNDWKLM  SVGVGEELMPHR+SQ QSQ+ V A
Sbjct:   28 HQTPKGRRGIRSRYLSVKNMIHDEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADAKALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAGPSNSTEDFSRNSVAWKDIGVAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDKHMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLLVSPRNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQLQSQTEVSA 323
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LBS9|A0A445LBS9_GLYSO (Non-structural maintenance of chromosomes element 4 OS=Glycine soja OX=3848 GN=D0Y65_007158 PE=3 SV=1)

HSP 1 Score: 517.694 bits (1332), Expect = 0.000e+0
Identity = 247/296 (83.45%), Postives = 270/296 (91.22%), Query Frame = 0 
Query:   30 YQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQSQSAVYA 325
            +QTPKGRRGIRSRYL+V NMIHDE+EEIAR DS KF+ IFNEME+LHQLV+KPREQVADAKALLDITQSLVMSVKN+A+GGLTPS+FVTHILKKFGGQ G  N  +D S+NSVAWKDIGVAVS VFR GCGC TMIG MDAK+KQRKV NRRK VRPTELARP+ LGG SGEERTETDK+M+TMFNILRINK VKLENL+LNR SFAQTVENLFALSFLVRDGRAEIKVNEAGW +VSPRNAPAAN+++SR+VAFSHFVFRFDFNDWKLM  SVGVGEELMPHR+SQ QSQ+ V A
Sbjct:   28 HQTPKGRRGIRSRYLSVKNMIHDEREEIARADSHKFNLIFNEMETLHQLVTKPREQVADAKALLDITQSLVMSVKNIAIGGLTPSDFVTHILKKFGGQAGPSNSTEDFSRNSVAWKDIGVAVSRVFRAGCGCYTMIGAMDAKIKQRKVYNRRKRVRPTELARPKELGGGSGEERTETDKHMITMFNILRINKFVKLENLILNRNSFAQTVENLFALSFLVRDGRAEIKVNEAGWLIVSPRNAPAANSVVSRDVAFSHFVFRFDFNDWKLMVCSVGVGEELMPHRDSQLQSQTEVSA 323
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6M7Z1|A0A4D6M7Z1_VIGUN (Non-structural maintenance of chromosomes element 4 OS=Vigna unguiculata OX=3917 GN=DEO72_LG6g2219 PE=3 SV=1)

HSP 1 Score: 513.842 bits (1322), Expect = 0.000e+0
Identity = 247/292 (84.59%), Postives = 264/292 (90.41%), Query Frame = 0 
Query:   27 DADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQ 318
            DADYQTPK RRGIRSRYLA  NMIHDE+EEIARPDSDKFD IF+EMESLHQ V+KPREQVADAKALL+ITQSLVMSV+  A GG+TPS+FVTHILKKFGG  G  N A+DCS+NSVAW DIGVAVSHVFR G GCCTM+ PMDAK+KQRKVINRRK VRPTELARPE L G SGEE  ETDK MLTMFNILRINKVVKLENLVLNR SF QTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAAN+++S +VAFSHFVFRFDFNDWKLM R+VGVGEELMPHRNS+SQ
Sbjct:   30 DADYQTPKRRRGIRSRYLAFKNMIHDEREEIARPDSDKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGITPSDFVTHILKKFGGHVGPSNSAEDCSRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIKQRKVINRRKPVRPTELARPEELCGGSGEEIAETDKLMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVRTVGVGEELMPHRNSESQ 321
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EU73|A0A3Q0EU73_VIGRR (Non-structural maintenance of chromosomes element 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756850 PE=3 SV=1)

HSP 1 Score: 504.212 bits (1297), Expect = 1.779e-177
Identity = 254/320 (79.38%), Postives = 276/320 (86.25%), Query Frame = 0 
Query:    1 MIAVKRELVDDGDSSSIDKHDGPELR----DADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQ 316
            MI VKREL  DGD SSIDK D  ELR    DADYQTPK  RGIRSRYLA  NMIHDE+EEIARPDS+KFD IF+EMESLHQ V+KPREQVADAKALL+ITQSLVMSV++ A GGLTPS+FVT+ILKKFGG  G  N A+DCS+NSVAW DIGVAVS VFR G GCCTM+ PMDAK++Q KVI RRK VRPTELARPE L G SGEE  ETDK+MLTMFNILR+NKVVKLENLVLNR SF QTVENLFALSFLVRDGRAEIKVNE+GWQLVSPRNAPAAN+++S +VAFSHFVFRFDFNDWKLM R+V VGEELMPHR  Q
Sbjct:    1 MINVKRELDGDGDCSSIDKRDS-ELRAVSDDADYQTPKRCRGIRSRYLAFKNMIHDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRSTANGGLTPSDFVTNILKKFGGHVGPSNSAEDCSRNSVAWNDIGVAVSRVFRAGYGCCTMMAPMDAKIEQ-KVIIRRKRVRPTELARPEELCGGSGEEIAETDKHMLTMFNILRMNKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVRTVRVGEELMPHRKEQ 318
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T0L2G8|A0A8T0L2G8_PHAAN (Non-structural maintenance of chromosomes element 4 OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0049570 PE=3 SV=1)

HSP 1 Score: 496.893 bits (1278), Expect = 1.569e-174
Identity = 256/322 (79.50%), Postives = 278/322 (86.34%), Query Frame = 0 
Query:    1 MIAVKRELVDDGDSSSIDKHDGPELR----DADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQSQ 318
            MI VKREL  DGD SSIDK D  EL     DADY+T K RRGIRSRYLA  NMI DE+EEIARPDS+KFD IF+EMESLHQ V+KPREQVADAKALL+ITQSLVMSV+  A GGLTPS+FVTHILKKFGG  G  N  +DC++NSVAW DIGVAVSHVFR G GCCTM+ PMDAK++QRKVINRRK VRPTELARPE L G SGEE  ETDK+MLTMFNILRINKVVKLENLVLNR SF QTVENLFALSFLVRDGRAEIKVNE+GWQLVSPRNAPAAN+++S +VAFSHFVFRFDFNDWKLM  +V VGEELMPHRNS+SQ
Sbjct:    1 MINVKRELDGDGDCSSIDKRDS-ELHAVSDDADYKTRKRRRGIRSRYLAFKNMIQDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGLTPSDFVTHILKKFGGHVGPSNSTEDCNRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIEQRKVINRRKRVRPTELARPEELCGGSGEEIAETDKHMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVGTVRVGEELMPHRNSESQ 321
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8L8L1|A0A8B8L8L1_ABRPR (Non-structural maintenance of chromosomes element 4 OS=Abrus precatorius OX=3816 GN=LOC113862140 PE=3 SV=1)

HSP 1 Score: 495.738 bits (1275), Expect = 2.778e-174
Identity = 238/292 (81.51%), Postives = 260/292 (89.04%), Query Frame = 0 
Query:   25 LRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQ 316
            + DADYQTPKGRRGIRSRYLAV NMI+DE++EIARPD+DKFDFIFNE+ESLHQLV+KPREQVADAKALLDIT+SLVM VK+ A GGLTPS FVTHIL+KFGGQGG  N A+DCS+NS+AW DIGVAVSHVFR   GC TMIGP DAK+K+RKV+NRR   R TEL RPEVLG DS E+ T TDKNMLTMFNILRINK+VKLENLVLNR SFAQTVENLFALSFLV+DGRAEIKVNEAGWQLVSPRNAPAANA+ S++V FSHFVFR DFNDWKLM RSVG GEELMP RN Q
Sbjct:   25 VNDADYQTPKGRRGIRSRYLAVTNMINDERDEIARPDTDKFDFIFNEVESLHQLVTKPREQVADAKALLDITKSLVMFVKSNATGGLTPSGFVTHILEKFGGQGGPSNSAEDCSRNSIAWNDIGVAVSHVFRGASGCSTMIGPTDAKIKERKVVNRRNRERTTELTRPEVLGEDSREDSTGTDKNMLTMFNILRINKIVKLENLVLNRNSFAQTVENLFALSFLVKDGRAEIKVNEAGWQLVSPRNAPAANAVHSKDVVFSHFVFRCDFNDWKLMLRSVGDGEELMPDRNCQ 316
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86RRG5|A0AA86RRG5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS3385 PE=4 SV=1)

HSP 1 Score: 498.819 bits (1283), Expect = 1.316e-172
Identity = 253/363 (69.70%), Postives = 276/363 (76.03%), Query Frame = 0 
Query:    1 MIAVKRELVDDGDSSSIDKHDG---PELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQ-------------------------------------------LVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQS 317
            MI VKRE   DGDSS  DK +    P   DADYQTPK RRGIRSRYLAV NMI DE+EEIARPDSDKF+ IF+EM SLHQ                                           L++KPREQVADAKALL+IT+SLVMSV+  A GG+TPS+FVTHILKKFGGQ G  N  +DCS+NSVAW DIGVA SHVFR G GCCTM+GPMDAK+KQRKVINRRK V PTELARPE L G SGEERTETDK+MLTMFNILR+NKVVKLENLVLNR SF QTVENLFALSFLVRDGRAEIKVNEAGWQLV+PRNAPA+N++ S +VAFSHFVFRFDFNDWKLM R+V VGEELMPHRN  S
Sbjct:  137 MINVKREFDSDGDSSRTDKRNSELHPVNDDADYQTPKRRRGIRSRYLAVKNMIEDEREEIARPDSDKFNLIFDEMASLHQQGAILVDDFQLYSHAPLQRYRTTWCANMYGDFLVNPMFAHWDILITKPREQVADAKALLEITKSLVMSVRTTANGGITPSDFVTHILKKFGGQVGPSNSTEDCSRNSVAWNDIGVAASHVFRAGYGCCTMMGPMDAKIKQRKVINRRKRVTPTELARPEELCGGSGEERTETDKHMLTMFNILRVNKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVAPRNAPASNSVRSGDVAFSHFVFRFDFNDWKLMVRTVEVGEELMPHRNKSS 499
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A3Q0EWZ2|A0A3Q0EWZ2_VIGRR (Non-structural maintenance of chromosomes element 4 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756850 PE=3 SV=1)

HSP 1 Score: 474.167 bits (1219), Expect = 8.325e-166
Identity = 240/301 (79.73%), Postives = 261/301 (86.71%), Query Frame = 0 
Query:    1 MIAVKRELVDDGDSSSIDKHDGPELR----DADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWK 297
            MI VKREL  DGD SSIDK D  ELR    DADYQTPK  RGIRSRYLA  NMIHDE+EEIARPDS+KFD IF+EMESLHQ V+KPREQVADAKALL+ITQSLVMSV++ A GGLTPS+FVT+ILKKFGG  G  N A+DCS+NSVAW DIGVAVS VFR G GCCTM+ PMDAK++Q KVI RRK VRPTELARPE L G SGEE  ETDK+MLTMFNILR+NKVVKLENLVLNR SF QTVENLFALSFLVRDGRAEIKVNE+GWQLVSPRNAPAAN+++S +VAFSHFVFRFDFNDWK
Sbjct:    1 MINVKRELDGDGDCSSIDKRDS-ELRAVSDDADYQTPKRCRGIRSRYLAFKNMIHDEREEIARPDSNKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRSTANGGLTPSDFVTNILKKFGGHVGPSNSAEDCSRNSVAWNDIGVAVSRVFRAGYGCCTMMAPMDAKIEQ-KVIIRRKRVRPTELARPEELCGGSGEEIAETDKHMLTMFNILRMNKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNESGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWK 299
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9C689|NSE4A_ARATH (Non-structural maintenance of chromosomes element 4 homolog A OS=Arabidopsis thaliana OX=3702 GN=NSE4A PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.928e-102
Identity = 151/280 (53.93%), Postives = 198/280 (70.71%), Query Frame = 0 
Query:   36 RRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNS 315
            RR +RS+YL++ N I+D K+++ + DSDKF  I N +E+LHQ V KPREQ+ADA+ALLDI  +L+ SVK+ +  G++P+ FV  ++  FG QG  G   D+ +Q S+ WKD+G AV       CGC TM+GPMD ++KQRK    RK  +P E  RP+ +     EE+T+TDKNM  MFNIL   K V+LENLVLNR+SFAQTVENLFALSFL +DGR EI V+++G     PRNAP AN ++S  V ++HFVFR DF DWKLM+  V +GEELMPHR +
Sbjct:   59 RRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSVKSQSAHGVSPAEFVNALISGFG-QGSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQT 337
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4JET1|NSE4B_ARATH (Non-structural maintenance of chromosomes element 4 homolog B OS=Arabidopsis thaliana OX=3702 GN=NSE4B PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 1.344e-96
Identity = 153/296 (51.69%), Postives = 207/296 (69.93%), Query Frame = 0 
Query:   23 PELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNV-AVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKV-INRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQ 316
            P +++ + Q    RR IRS+YLA+ + I D K+++ + DS+KF+ I NE+E+LHQ V KPREQ+ADA+ALLD+T S+V SVK+  A GG++P+ FV  ++  FG      + AD+ +Q S+ WKD+G  V       CGC TM+GPM ++MKQRK  +  RK  +P    +PE +     E++++TD NM  MFNILR NK VK+ENLVLNRKSFAQT EN+FALSFLV+DGR EI V+  G   V PRNAPAAN +LS  VA++HFV RFD+ DW+ M++ V VGEELMP R ++
Sbjct:   49 PPIQEEEEQGIADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRID-ADENTQVSMKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLRETK 343
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6BDR8|NSE4_SCHPO (Non-structural maintenance of chromosome element 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nse4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.602e-19
Identity = 62/283 (21.91%), Postives = 125/283 (44.17%), Query Frame = 0 
Query:   36 RRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPS---NFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVR-PTELARPEVLGG-DSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHR 313
            +R +R RY  + N + + + E+   +++           L   V  P E   DA  L        +  + + +G   P       T  +K+F     S +      +   AW  +G   S+  ++      M+GP+  + K+R +  R +  + P  L +P +L   +   +   T KN+L +  +L+ ++ V     + N +S+ QTVENLF +SFL ++G+A +  NE+G  ++  R  P  + +++  +     V     + ++ + +   + E ++P R
Sbjct:    6 KRDLRKRYRNLINKVQESRLELVDEENNNLYETITTANDLFSSVDAPTEATLDALLLTKTVDLASIKARQLHIGR--PKFNIELFTKNIKQFLNYPTSHSNVTRIQEIDTAWSRLGKLASNCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNITTQENNTTKNVLHISRLLQAHQPVNFLKFITNPQSYPQTVENLFYVSFLFKEGKAALVENESGILMLETRIPPTDDQVVAGEIRNIQLVLDMTMDLYENIIKEYNIKESIIPTR 286
[Close]
BLAST of Cc_v2.0_07412.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q3V124|EID3_MOUSE (EP300-interacting inhibitor of differentiation 3 OS=Mus musculus OX=10090 GN=Eid3 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 1.203e-8
Identity = 66/295 (22.37%), Postives = 120/295 (40.68%), Query Frame = 0 
Query:   37 RGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALL---DITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCAD--DCSQNSVA--WKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKV---INRRKCVR------PTELARPEVLGG-DSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHF----VFRFDFNDWKLMARSVGVGEELM 310
            R IR +Y  +   +   +E+I    SD       E   L   VS+ RE   DA+ L+   D+ +     + N  +    P  F   +L   G       C +  DC  + V   W  +    +    +      + G   A+   RK     ++R C        PT+L R +V    ++ E+  E    +L  +     +  V     V++  SF++TVEN+F +SF++RDG A I++++    ++ P N    +     + ++S+     V      DWK +  +  + E ++
Sbjct:   81 RKIRRQYRQLIYTVQQNREDIVNTASDTLSEALEEANVLFDGVSRTREAALDAQFLVLASDLGKEKAKQL-NTDMNFFNPIAFCDLLLLFVGFNWVEEECKEFSDCDDSIVLSFWGMLHEEATSWMLQAETFHFIFGSFKAERSARKPRLGCHKRACKMEGSGDMPTKLRRLDVHANQETTEKEVERILGLLQTYFQKYPDTPVSYFEFVIDPNSFSRTVENIFYVSFIIRDGFARIRLDQDRLPILEPTNVSQVD---DESDSYSYCRKQGVISLSLQDWKNIVSTFEISEAMI 371
[Close]
BLAST of Cc_v2.0_07412.1 vs. Araport11
Match: | (Symbols: Nse4A | | chr1:18939480-18941560 REVERSE LENGTH=403)

HSP 1 Score: 310.071 bits (793), Expect = 2.011e-103
Identity = 151/280 (53.93%), Postives = 198/280 (70.71%), Query Frame = 0 
Query:   36 RRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNS 315
            RR +RS+YL++ N I+D K+++ + DSDKF  I N +E+LHQ V KPREQ+ADA+ALLDI  +L+ SVK+ +  G++P+ FV  ++  FG QG  G   D+ +Q S+ WKD+G AV       CGC TM+GPMD ++KQRK    RK  +P E  RP+ +     EE+T+TDKNM  MFNIL   K V+LENLVLNR+SFAQTVENLFALSFL +DGR EI V+++G     PRNAP AN ++S  V ++HFVFR DF DWKLM+  V +GEELMPHR +
Sbjct:   59 RRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQQVRKPREQIADAEALLDIANTLMSSVKSQSAHGVSPAEFVNALISGFG-QGSLGIDTDETAQVSLKWKDLGFAVCSTVLVSCGCSTMLGPMDTELKQRKRAPNRKRTKPGEGVRPDEVDDSQSEEKTDTDKNMTIMFNILGKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDANVVMSGEVIYNHFVFRLDFKDWKLMSEMVPLGEELMPHRQT 337
[Close]
BLAST of Cc_v2.0_07412.1 vs. Araport11
Match: | (Symbols: Nse4B | | chr3:7257187-7258891 REVERSE LENGTH=383)

HSP 1 Score: 294.664 bits (753), Expect = 1.402e-97
Identity = 153/296 (51.69%), Postives = 207/296 (69.93%), Query Frame = 0 
Query:   23 PELRDADYQTPKGRRGIRSRYLAVANMIHDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLVMSVKNV-AVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVAVSHVFREGCGCCTMIGPMDAKMKQRKV-INRRKCVRPTELARPEVLGGDSGEERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMARSVGVGEELMPHRNSQ 316
            P +++ + Q    RR IRS+YLA+ + I D K+++ + DS+KF+ I NE+E+LHQ V KPREQ+ADA+ALLD+T S+V SVK+  A GG++P+ FV  ++  FG      + AD+ +Q S+ WKD+G  V       CGC TM+GPM ++MKQRK  +  RK  +P    +PE +     E++++TD NM  MFNILR NK VK+ENLVLNRKSFAQT EN+FALSFLV+DGR EI V+  G   V PRNAPAAN +LS  VA++HFV RFD+ DW+ M++ V VGEELMP R ++
Sbjct:   49 PPIQEEEEQGIADRRAIRSQYLALTHKIKDAKDDLTKIDSNKFNSIINEVENLHQKVRKPREQIADAEALLDLTNSVVSSVKSQSAHGGVSPAEFVNALINGFGKTSLRID-ADENTQVSMKWKDLGFTVCSTVLVSCGCTTMMGPMYSEMKQRKSRVGNRKRTKPGAGVKPEEVDDTEAEKKSDTDNNMAVMFNILRKNKRVKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNGSHFVEPRNAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEELMPLRETK 343
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_07412.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151TU71|A0A151TU71_CAJCA0.000e+0100.00Non-structural maintenance of chromosomes element ... [more]
tr|A0A371FLR1|A0A371FLR1_MUCPR0.000e+074.26Non-structural maintenance of chromosomes element ... [more]
tr|I1JNK0|I1JNK0_SOYBN0.000e+083.78Non-structural maintenance of chromosomes element ... [more]
tr|A0A445LBS9|A0A445LBS9_GLYSO0.000e+083.45Non-structural maintenance of chromosomes element ... [more]
tr|A0A4D6M7Z1|A0A4D6M7Z1_VIGUN0.000e+084.59Non-structural maintenance of chromosomes element ... [more]
tr|A0A3Q0EU73|A0A3Q0EU73_VIGRR1.779e-17779.38Non-structural maintenance of chromosomes element ... [more]
tr|A0A8T0L2G8|A0A8T0L2G8_PHAAN1.569e-17479.50Non-structural maintenance of chromosomes element ... [more]
tr|A0A8B8L8L1|A0A8B8L8L1_ABRPR2.778e-17481.51Non-structural maintenance of chromosomes element ... [more]
tr|A0AA86RRG5|A0AA86RRG5_9FABA1.316e-17269.70Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A3Q0EWZ2|A0A3Q0EWZ2_VIGRR8.325e-16679.73Non-structural maintenance of chromosomes element ... [more]
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BLAST of Cc_v2.0_07412.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 4
Match NameE-valueIdentityDescription
sp|Q9C689|NSE4A_ARATH1.928e-10253.93Non-structural maintenance of chromosomes element ... [more]
sp|F4JET1|NSE4B_ARATH1.344e-9651.69Non-structural maintenance of chromosomes element ... [more]
sp|Q6BDR8|NSE4_SCHPO3.602e-1921.91Non-structural maintenance of chromosome element 4... [more]
sp|Q3V124|EID3_MOUSE1.203e-822.37EP300-interacting inhibitor of differentiation 3 O... [more]
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BLAST of Cc_v2.0_07412.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 2
Match NameE-valueIdentityDescription
|2.011e-10353.93Symbols: Nse4A | | chr1:18939480-18941560 REVERSE... [more]
|1.402e-9751.69Symbols: Nse4B | | chr3:7257187-7258891 REVERSE L... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014854Non-structural maintenance of chromosome element 4, C-terminalPFAMPF08743Nse4_Ccoord: 223..310
e-value: 5.8E-19
score: 79.4
IPR027786Nse4/EID familyPANTHERPTHR16140UNCHARACTERIZEDcoord: 25..322

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_07412.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07412.1; Name=Cc_v2.0_07412.1; organism=Cajanus cajan; type=mRNA; length=1029bp
ATGATAGCGGTGAAACGCGAATTGGTTGACGATGGCGATAGCAGTAGCAT
CGACAAGCATGACGGCCCCGAACTCCGTGACGCCGATTACCAAACTCCGA
AAGGCCGTCGCGGTATTCGTTCTCGCTACCTCGCCGTCGCCAACATGATT
CACGATGAAAAGGAGGAAATCGCGAGGCCTGACTCTGACAAGTTTGATTT
CATTTTTAATGAAATGGAGAGCTTGCATCAGCTAGTTTCAAAACCAAGAG
AACAAGTAGCTGATGCAAAGGCCCTTTTGGACATCACTCAATCCTTGGTA
ATGTCTGTGAAAAATGTTGCCGTTGGTGGACTAACTCCTTCAAATTTTGT
CACCCACATTCTTAAAAAATTCGGAGGTCAAGGTGGATCAGGTAATTGCG
CAGACGATTGCAGCCAAAACTCTGTAGCTTGGAAGGATATTGGAGTTGCA
GTCTCGCATGTTTTCAGAGAGGGTTGTGGGTGTTGTACAATGATTGGCCC
AATGGATGCTAAAATGAAGCAGAGGAAGGTCATTAATCGTCGAAAGTGTG
TGAGACCCACTGAATTGGCACGACCCGAAGTGCTTGGTGGAGATTCAGGG
GAAGAGAGAACTGAAACTGATAAAAATATGTTAACTATGTTTAACATCTT
AAGGATTAATAAAGTCGTGAAACTTGAAAATCTGGTTTTGAATCGTAAAT
CATTTGCTCAAACGGTGGAGAATTTATTTGCTTTATCTTTTTTAGTCAGA
GATGGGCGGGCTGAAATAAAAGTGAATGAGGCTGGATGGCAACTAGTTTC
GCCAAGGAATGCTCCAGCTGCAAATGCAATTCTTTCCAGGAATGTTGCTT
TCAGCCATTTTGTATTCCGATTTGACTTTAATGATTGGAAGTTGATGGCT
CGCTCTGTTGGGGTTGGGGAGGAGCTGATGCCTCATAGGAATAGTCAATC
ACAGAGTCAGAGTGCAGTATATGCAGGATCTCACGAGACAATGCCGACAG
CAACAAAAGTTTTGGGAACTATCCAATAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_07412.1

>drCajCajn.Asha.2.0.Cc_v2.0_07412.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07412.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_07412.1; organism=Cajanus cajan; type=polypeptide; length=342bp
MIAVKRELVDDGDSSSIDKHDGPELRDADYQTPKGRRGIRSRYLAVANMI
HDEKEEIARPDSDKFDFIFNEMESLHQLVSKPREQVADAKALLDITQSLV
MSVKNVAVGGLTPSNFVTHILKKFGGQGGSGNCADDCSQNSVAWKDIGVA
VSHVFREGCGCCTMIGPMDAKMKQRKVINRRKCVRPTELARPEVLGGDSG
EERTETDKNMLTMFNILRINKVVKLENLVLNRKSFAQTVENLFALSFLVR
DGRAEIKVNEAGWQLVSPRNAPAANAILSRNVAFSHFVFRFDFNDWKLMA
RSVGVGEELMPHRNSQSQSQSAVYAGSHETMPTATKVLGTIQ
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mRNA from alignment at CcLG03_v2.0:40393268..40397059+

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_07412.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07412.1; Name=Cc_v2.0_07412.1; organism=Cajanus cajan; type=mRNA; length=3792bp; location=Sequence derived from: CcLG03_v2.0:40393268..40397059+ (Cajanus cajan
ATGATAGCGGTGAAACGCGAATTGGTTGACGATGGCGATAGCAGTAGCAT
CGACAAGCATGACGGCCCCGAACTCCGTGACGCCGATTACCAAACTCCGA
AAGGCCGTCGCGGTATTCGTTCTCGCTACCTCGCCGTCGCCAACATGATT
CACGGTACTTTACTTTTATTCGTTGTGCTTTCCGCACTCTCGGTTGCGTT
CTACGCGTGCGAATGTATATTTACAAGTTGCTAGACTTTAGAACGCACAA
AACGTGCCTTGTTATCAATTTTCTGCGCACGAAACGGAATGGTCGCGTTT
GGAGTGTCGCTTGCACGAGTACGTTTTGGTTTTTGCAGATGAAAAGGAGG
AAATCGCGAGGCCTGACTCTGACAAGTTTGATTTCATTTTTAATGAAATG
GAGAGCTTGCATCAGCTAGGtatttgtttatttacttatttatttTAATA
GCAGCATTTTCTTTTTTAATACCTAGGCTTTTGAGTGGTTCGTCGAATTA
GTTTTGAGGAAATAATGTTTTGAAACCTCTTTATGGAAATTAAAATATTA
TTAGTAGTTTAAAATAATCTAAACTAAACGCGTATTATTAAGAGTTATGT
TATGAACATTATACGTTTAAATATGATTAATATTAAGAATGATTGAACTT
TTGTATATATAATTATCGATTATAAATATACACTAATTATCTTTTAAGTG
TTATTGAAAAGTTTTAATGGTAGTTAACTTTTCCTGCAAGTTTATTAGTA
ACTTTACGAGGTTATACCATTGACTACTCAGCATGAGTAAATATGAATAG
TTTTCCTTAATAAAAAATGCTAAATAGTATGAAAGATTTTTCGATAAAAT
GGTACGAAACCATAAATCAACGGCTGCTTGATTTGCGTCAAGTTttattt
tgttttattattattattGAAATTTTGAACCAATAAAAAAACTACTTAAA
CTGTTTCGTACTACATTTTGTAAAAAGAATTTCGTAACATATAGCACTGC
TCTTACTTAATAATATTAAGAGGTTGCATGCGATTAATTAGTAGATGTGT
AAATATATAAAATTCCGAATATTTAGTTAGTAGTGTGATGAAGTTATAGG
TATATGGTTAAATTTTTTTCTCATAAAATTGATAGTATTATCAGGTTGTT
AAAATGTCTGATTATGATTAATTTCGTTATACAATCGCACGTTTTAATAA
TACTTATATATACATTTAATCACATCACGTGTCTAGCTGGATATTACAGT
TACTATTATTAATCCATGAGTTTGGAGACTTGGAGTGGAGCAAGGGAGAG
GAAAAAAAATGAAATGGGATCACGACCATTTTCTGTTGATAATAATCGCA
TATAGTTGCGGGGGAGGAGGAGGAAGGAGAATTGTGCTACTATGCCGATT
GCGTTAATTTTTGCCAAAACTTATTAATCGGTTAAAATTTGATCGATGTA
GAAAGTTAGTTATTTCTATTCTACATCGATGACATTTTTATCGATTTTAC
AACTGATATAATATCTCCTTTTTAACTACTTTAAAAGACCCTGCACTGGT
GTCTACTATTGCGGCATTCAAGACTTTAAGTAATTCATATTGTTAAATTA
TTATTGAAATCAATAAGGTGGGGACAGAAACTACAAATTATGAAATGAAA
GACTTGTATATAATTTTAGTTACCTATATAACTAACTACAAAATATTTCA
ATCATATCAAATATAAAACAACATACTAATAAGGTGTTGGTCTAAAATTT
GGAAGGGAAGACTCATCAAAAGTGATGAAGTCGGCGGATACTTCTAGTTA
CAATATATGTATATATATAAAAAAATAACAACATCCAAAGATTAGGAAAG
ATGATAACCAATGTTTTTATGGTGTTGCTCACATGACTTCCTTTGCTTCT
CATATTCAACTTTTGTTGTAGTTCATGCCGCCATTTGTTATCTCGTCATA
GGTAGTTACTCTTGCATGTAAGGATATAACTTTTTTTTTTATTGTTTCTA
ATGTTTTGTCTAATGTTAGTTTCAAAACCAAGAGAACAAGTAGCTGATGC
AAAGGCCCTTTTGGACATCACTCAATCCTTGGTAATGTCTGTGAAAAATG
TTGCCGTTGGTGGACTAACTCCTTCAAATTTTGTCACCCACATTCTTAAA
AAATTCGGAGGTCAAGGTGGATCAGGTAATTGCGCAGACGATTGCAGCCA
AAACTCTGTAGCTTGGAAGGATATTGGAGTTGCAGTCTCGCATGTTTTCA
GAGAGGGTTGTGGGTGTTGTACAATGTAATGTTCGTATCTATATTGAGAG
TTCTTTGTTATCCCATGGTAATGTTTCTTTGGATGCTAATTTTCAATTTT
GCTTATTCAGGATTGGCCCAATGGATGCTAAAATGAAGCAGAGGAAGGTC
ATTAATCGTCGAAAGTGTGTGAGACCCACTGAATTGGCACGACCCGAAGT
GGTAAACCTTGTTGTGTCTGCTGTTTTGCTATGAAAAAAAGAGCCTAACG
GAGATTTCATAAACGGTTCTGATTGTGATAGACCTTTAAATGATGCATAG
TCGGTTGTTTTTAATTTCCAGTTCATGATCTGCGCGTAGTTTTTTACGGT
TTACCACCCATTTGTTTGTTGTGAGAACATTATGAAGATGAAATCTCTAT
GAGCCTAACTCGAGAAATGGAATTATTAAAGCTTAAAATTAGCTGTTTGC
TATTCAGAATTGTAAATGTAGTGATTTTTATGTAATACCGATATGCTAAT
CTCATTTTCTTTTATTGTATATTTCTGCAGCTTGGTGGAGATTCAGGGGA
AGAGAGAACTGAAACTGATAAAAATATGTTAACTATGTTTAACATCTTAA
GGATTAATAAAGTCGTGAAACTTGAAAATCTGGTTTTGAATCGTAAATCA
TTTGCTCAAACGGTGGAGAATTTATTTGCTTTATCTTTTTTAGTCAGAGA
TGGGCGGGCTGAAATAAAAGTGAATGAGGCTGGATGGCAACTAGTTTGTG
AGTTACTTTGAAATATTTATGCCAATTCTGAACTCTCAATTTATTATACT
TTTAGTCTGGATTTTACCTCGATATTTTCTTCATTTACTTGCTCTGTGTC
AGCGCCAAGGAATGCTCCAGCTGCAAATGCAATTCTTTCCAGGAATGTTG
CTTTCAGCCATTTTGTATTCCGATTTGACTTTAATGATTGGAAGGTATTT
TTTTTATAGTTGTCTTAGTGTATCATTGTGATTGTGTATGTTACAGTTAC
GAGCAATATTTTTTTGCTTCCCTTTTTCTTTTATTGAATATTTATTGGTG
GGACAAATGTAATGAACCTTCGCAATCAAATGGCTGTGGGAATGTCATTG
TTTTGAGAGAAGTCTAGAGCAAAATTCCCTTACCCTTAACTGCTCAGATT
GTTATGGAGCTATAAAATAGCCTTCTATTTTAAATTCTATCGAGTTTCAG
TATGCATTTTTTTTTTCATTTTCTTGCACGTGATTTCCTACTGGAAGCAA
ATTATTCAAGAAAAAGGATTTCCTTTGACATTTAATTTATGATAATTTAT
TCTGGAAGCTTCTGTTAAAAGAAATTTCGTGAAACTACAAGCTATCTTTT
CTTCATTTGATGTCTTTGTTTTTTTATTTATCTCTTCTTGTATTGAATTT
TCAGTTGATGGCTCGCTCTGTTGGGGTTGGGGAGGAGCTGATGCCTCATA
GGAATAGTCAATCACAGAGTCAGAGTGCAGTATATGCAGGATCTCACGAG
ACAATGCCGACAGCAACAAAAGTTTTGGGAACTATCCAATAA
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Coding sequence (CDS) from alignment at CcLG03_v2.0:40393268..40397059+

>drCajCajn.Asha.2.0.Cc_v2.0_07412.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_07412.1; Name=Cc_v2.0_07412.1; organism=Cajanus cajan; type=CDS; length=1029bp; location=Sequence derived from: CcLG03_v2.0:40393268..40397059+ (Cajanus cajan
ATGATAGCGGTGAAACGCGAATTGGTTGACGATGGCGATAGCAGTAGCAT
CGACAAGCATGACGGCCCCGAACTCCGTGACGCCGATTACCAAACTCCGA
AAGGCCGTCGCGGTATTCGTTCTCGCTACCTCGCCGTCGCCAACATGATT
CACGATGAAAAGGAGGAAATCGCGAGGCCTGACTCTGACAAGTTTGATTT
CATTTTTAATGAAATGGAGAGCTTGCATCAGCTAGTTTCAAAACCAAGAG
AACAAGTAGCTGATGCAAAGGCCCTTTTGGACATCACTCAATCCTTGGTA
ATGTCTGTGAAAAATGTTGCCGTTGGTGGACTAACTCCTTCAAATTTTGT
CACCCACATTCTTAAAAAATTCGGAGGTCAAGGTGGATCAGGTAATTGCG
CAGACGATTGCAGCCAAAACTCTGTAGCTTGGAAGGATATTGGAGTTGCA
GTCTCGCATGTTTTCAGAGAGGGTTGTGGGTGTTGTACAATGATTGGCCC
AATGGATGCTAAAATGAAGCAGAGGAAGGTCATTAATCGTCGAAAGTGTG
TGAGACCCACTGAATTGGCACGACCCGAAGTGCTTGGTGGAGATTCAGGG
GAAGAGAGAACTGAAACTGATAAAAATATGTTAACTATGTTTAACATCTT
AAGGATTAATAAAGTCGTGAAACTTGAAAATCTGGTTTTGAATCGTAAAT
CATTTGCTCAAACGGTGGAGAATTTATTTGCTTTATCTTTTTTAGTCAGA
GATGGGCGGGCTGAAATAAAAGTGAATGAGGCTGGATGGCAACTAGTTTC
GCCAAGGAATGCTCCAGCTGCAAATGCAATTCTTTCCAGGAATGTTGCTT
TCAGCCATTTTGTATTCCGATTTGACTTTAATGATTGGAAGTTGATGGCT
CGCTCTGTTGGGGTTGGGGAGGAGCTGATGCCTCATAGGAATAGTCAATC
ACAGAGTCAGAGTGCAGTATATGCAGGATCTCACGAGACAATGCCGACAG
CAACAAAAGTTTTGGGAACTATCCAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR014854Nse4_C
IPR027786Nse4/EID
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0030915Smc5-Smc6 complex