Cc_v2.0_08270.1

Transcript Overview


Name	Cc_v2.0_08270.1
Unique Name	drCajCajn.Asha.2.0.Cc_v2.0_08270.1
Type	mRNA
Organism	Cajanus cajan (pigeon pea)
Sequence length	474

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
CcLG03_v2.0	chromosome	CcLG03_v2.0:50139080..50139553 -	Cajanus cajan cv. Asha genome v2.0	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Cajanus cajan cv. Asha genome v2.0	2024-06-26
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL	2024-07-30
InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot	2024-07-30
Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11	2024-07-30

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
avjccaL366	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjccaL455	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
ccapsR315	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR329	Pisum sativum Cameor genome v1a	Pisum sativum
ccapsR394	Pisum sativum Cameor genome v1a	Pisum sativum
ccavrvR306	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccapvR345	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavrvR378	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
ccavfhR340	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccapvR399	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccavfhR362	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccavfhR368	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
ccavssR352	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavssR367	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavssR403	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
ccavuR260	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR345	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccavuR302	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
ccavumR415	Vigna umbellata FF25 genome v1.0	Vigna umbellata
ccccaL0983	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccavunR227	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR344	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
ccavunR257	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
ccapvfR405	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cc_v2.0_08270	drCajCajn.Asha.2.0.Cc_v2.0_08270	Cajanus cajan	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.Cc_v2.0_08270.1	drCajCajn.Asha.2.0.cds.Cc_v2.0_08270.1	Cajanus cajan	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cc_v2.0_08270.1.exon1	drCajCajn.Asha.2.0.Cc_v2.0_08270.1.exon1	Cajanus cajan	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
drCajCajn.Asha.2.0.Cc_v2.0_08270.1	drCajCajn.Asha.2.0.Cc_v2.0_08270.1	Cajanus cajan	polypeptide
drCajCajn.Asha.2.0.Cc_v2.0_08270.1	drCajCajn.Asha.2.0.Cc_v2.0_08270.1-protein	Cajanus cajan	polypeptide

Homology

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TW89|A0A151TW89_CAJCA (DNA-binding protein ESCAROLA OS=Cajanus cajan OX=3821 GN=KK1_010550 PE=4 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 2.207e-106
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0

Query:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLDFLVL 157
            MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLDFLVL
Sbjct:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLDFLVL 157

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TW55|A0A151TW55_CAJCA (DNA-binding protein ESCAROLA OS=Cajanus cajan OX=3821 GN=KK1_010547 PE=4 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.015e-56
Identity = 103/143 (72.03%), Postives = 114/143 (79.72%), Query Frame = 0

Query:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAAT 141
            MVE  T+I LS    PSS+DNN NTI  SSSHQKSQPLKK+RGR LGS+NK ILP +INQ NG+G +PIYINI PN SD+I+TVVQFA  Y+V+F VVSASGTISC TL Q  SQ P FI HGPFTLVSLSGTYINNNP  AT
Sbjct:    1 MVEPRTIIPLSSPFSPSSDDNNSNTIIGSSSHQKSQPLKKARGRPLGSKNKLILPTMINQANGNGPKPIYINI-PNNSDLIETVVQFARRYQVNFSVVSASGTISCATLHQTHSQIPTFIAHGPFTLVSLSGTYINNNPLVAT 142

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3T4U2|A0A0S3T4U2_PHAAN (PPC domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.10G146200 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.344e-31
Identity = 78/159 (49.06%), Postives = 102/159 (64.15%), Query Frame = 0

Query:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPL----KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAY--RVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLD 153
            MV+   V  LS     SS+DN F+ +T SS+H+KS       K++RGR +GS+NKP L ++I+Q N H  +PI+I I P  SD+I+ ++QFAY  ++S  V SASG+I  VTLR  +S T  FI HGPFTLVSL GT INNN      S + S  SNLD
Sbjct:    1 MVQPSNVTPLSSTPLSSSHDNTFDDVTDSSTHRKSPSSSSSSKRTRGRPMGSKNKPKLTLVIDQDNEHSQKPIFIQI-PKNSDVIEALIQFAYDYQISITVQSASGSIMNVTLRGSESITSTFISHGPFTLVSLIGTCINNN------SCTVSSLSNLD 152

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9UQU0|A0A0L9UQU0_PHAAN (PPC domain-containing protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0156050 PE=4 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.344e-31
Identity = 78/159 (49.06%), Postives = 102/159 (64.15%), Query Frame = 0

Query:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPL----KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAY--RVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLD 153
            MV+   V  LS     SS+DN F+ +T SS+H+KS       K++RGR +GS+NKP L ++I+Q N H  +PI+I I P  SD+I+ ++QFAY  ++S  V SASG+I  VTLR  +S T  FI HGPFTLVSL GT INNN      S + S  SNLD
Sbjct:    1 MVQPSNVTPLSSTPLSSSHDNTFDDVTDSSTHRKSPSSSSSSKRTRGRPMGSKNKPKLTLVIDQDNEHSQKPIFIQI-PKNSDVIEALIQFAYDYQISITVQSASGSIMNVTLRGSESITSTFISHGPFTLVSLIGTCINNN------SCTVSSLSNLD 152

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LFZ4|A0A445LFZ4_GLYSO (AT-hook motif nuclear-localized protein 17 OS=Glycine soja OX=3848 GN=D0Y65_007999 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.044e-29
Identity = 70/144 (48.61%), Postives = 91/144 (63.19%), Query Frame = 0

Query:   11 SLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNL 152
            S ++ PSS ++ F+    SSSHQ      KSRGR LGS+NKP +P++INQ +   ++PI+I  VP  SD+I+ VVQFA   +VS  V SASG+I   TL Q    T  F++ GPFTL+SL+GTYINNN      S   S  SNL
Sbjct:    5 STITPPSSEEHTFHNAIESSSHQIPPSSNKSRGRPLGSKNKPKIPLVINQDSDLALKPIFIQ-VPKNSDVIEAVVQFARQCQVSITVQSASGSILEATLCQTLPDTSTFVVFGPFTLISLTGTYINNN-----CSFRISFCSNL 142

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|K7KGK5|K7KGK5_SOYBN (PPC domain-containing protein OS=Glycine max OX=3847 GN=100795303 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.067e-28
Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 0

Query:   11 SLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNL 152
            S ++ PSS  + F+    SSSHQ      KSRGR LGS+NKP +P++INQ +   ++PI+I  VP  SD+I+ VVQFA   +VS  V SASG+I   TL Q    T  F++ GPFTL+SL+GTYINNN      S   S  SNL
Sbjct:    5 STITPPSSEVHTFHNAIESSSHQIPPSSNKSRGRPLGSKNKPKIPLVINQDSDLALKPIFIQ-VPKNSDVIEAVVQFARQCQVSITVQSASGSILEATLCQTLPDTSTFVVFGPFTLISLTGTYINNN-----CSFRISFCSNL 142

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VMQ4|A0A1S3VMQ4_VIGRR (AT-hook motif nuclear-localized protein 17-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106776686 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.999e-26
Identity = 62/119 (52.10%), Postives = 81/119 (68.07%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLDF 154
            LK++RGR LGS+NKP L + INQ N H  +PI+I I P  SD+I+T+++FA  Y++S  V SASG+I   TLR     T  FI+HGPFTLVSL+GT I+NN      S   SL+SN+D 
Sbjct:   40 LKRTRGRPLGSKNKPKLTLPINQNNEHDEKPIFIQI-PKNSDVIETLIKFARDYKISITVRSASGSILNATLRDNQYGTSTFIVHGPFTLVSLTGTCIHNN------SSGVSLSSNVDL 151

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6MM50|A0A4D6MM50_VIGUN (PPC domain-containing protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG7g2991 PE=4 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.356e-26
Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLD 153
            K++RGR +GS+NKP L +L+NQ N H  +PI+I I P  SD+I+T++QF+  Y++S  + SASG+I  V+LR  +S T  FI++GPFTLVSL GT INNN +  +S       SNLD
Sbjct:   42 KRARGRPVGSKNKPKLTLLMNQDNEHVKKPIFIQI-PKNSDVIETLIQFSCDYQISITIQSASGSILKVSLRDNESITSTFIVYGPFTLVSLIGTCINNNSYTVSS------LSNLD 151

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86SRR5|A0AA86SRR5_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS23368 PE=4 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.285e-25
Identity = 70/139 (50.36%), Postives = 88/139 (63.31%), Query Frame = 0

Query:    1 MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFA--YRVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNP 137
            M + GT   LS      S  N  + +  SSSH KS   K+ RGR +GS+NKP LP +I+  N H  +PI+I  VP  SD+I+ VV+FA  Y+VS  V SASG+I   TLR   S T AFI+HGPFTLVSL+GT + NNP
Sbjct:    1 MAQPGTETPLSSTPICPSEANAVHEVIGSSSHPKSPSSKRKRGRPVGSKNKPKLPPIIDHHNHHAQKPIFIQ-VPRNSDVIEAVVKFARDYQVSVTVQSASGSILNATLRNSHSSTSAFIVHGPFTLVSLTGTCLYNNP 138

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3UA80|A0A1S3UA80_VIGRR (AT-hook motif nuclear-localized protein 17-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106763234 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.300e-24
Identity = 61/113 (53.98%), Postives = 77/113 (68.14%), Query Frame = 0

Query:   43 GRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAY--RVSFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTSNLD 153
            GR +GS+NKP L ++I+Q N H  +PI+I I P  SD+IK ++QF+Y  + S  V SASG+I  VTLR  +S T AFI+HGPFTLVSL GT INNN      S + S  SNLD
Sbjct:   47 GRPVGSKNKPKLTLVIDQDNKHTQKPIFIQI-PKNSDVIKALIQFSYDYQSSITVHSASGSIRNVTLRDNESITSAFIVHGPFTLVSLIGTCINNN------SCTISSLSNLD 152

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.907e-11
Identity = 34/100 (34.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQ-TPAFII--HGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + +R  ++  + +  D++++V  FA R      V+S +G ++ VT+RQP S  +P  ++  HG F ++SLSG+++
Sbjct:  105 RRPRGRPAGSKNKPKPPIIITRDSANALR-THVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFL 203

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 8.893e-11
Identity = 33/98 (33.67%), Postives = 61/98 (62.24%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFI-IHGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + +R  ++  + +  DI+  +  FA R      V+S +G+++ VT+RQP S   + + +HG F ++SLSG+++
Sbjct:  118 RRPRGRPAGSKNKPKAPIIITRDSANALR-THVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFL 214

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LTA2|AHL17_ARATH (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 9.758e-11
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFI-----IHGPFTLVSLSGTYINNNP 137
            +++ RGR  GS+NKP  P+ + +     + P YI  VP+ +D+++ + +F  R S    V+S SG+++ VTLRQP   +PA +      HG F L+S+S T++   P
Sbjct:   55 VRRPRGRPPGSKNKPKPPVFVTRDTDPPMSP-YILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQP---SPAALGSTITFHGKFDLLSVSATFLPPPP 157

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9M9R4|AHL28_ARATH (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.412e-10
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPI---YINIVPNKSDIIKTVVQF--AYRVSFKVVSASGTISCVTLRQPDSQTPAFII--HGPFTLVSLSGTY 132
            + + RGR  GS+NKP  PI +       + P    YI  VP+ +D+++ + +F     + F V+S SG+++ VTLRQP    P   I  HG F L+S+S T+
Sbjct:    4 VGRPRGRPRGSKNKPKAPIFVT------IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATF 99

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SJG4|AHL16_ARATH (AT-hook motif nuclear-localized protein 16 OS=Arabidopsis thaliana OX=3702 GN=AHL16 PE=1 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 9.822e-10
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            K+ RGR  GS+NKP  PI++   + + +R   + I  +  DI +T+  FA R      ++SA+G ++ VTLRQP S      +HG + ++SL G+ +
Sbjct:   53 KRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEIS-SGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSIL 148

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LZX7|AHL18_ARATH (AT-hook motif nuclear-localized protein 18 OS=Arabidopsis thaliana OX=3702 GN=AHL18 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.970e-9
Identity = 37/128 (28.91%), Postives = 69/128 (53.91%), Query Frame = 0

Query:    8 ISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            I   L ++PS  +N           +K +P    RGR  GS+NKP  PI++ + + +  R  ++  + N  D+++++  FA R      V++ +G ++ VT+RQP     +  +HG F ++SLSG+++
Sbjct:   42 IGEDLATFPSGEENI----------KKRRP----RGRPAGSKNKPKAPIIVTRDSANAFR-CHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPGGGVVS--LHGRFEILSLSGSFL 152

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 3.063e-9
Identity = 34/101 (33.66%), Postives = 61/101 (60.40%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYR--VSFKVVSASGTISCVTLRQPDS----QTPAFIIHGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + ++  ++  V N  D++++V  FA R      V+S +G ++ VT+RQP S     +    +HG F ++SLSG+++
Sbjct:   89 RRPRGRPAGSKNKPKPPIIITRDSANALK-SHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFL 188

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|O82166|AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 9.819e-9
Identity = 29/98 (29.59%), Postives = 59/98 (60.20%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            +++ RGR  GS+NKP  P+++ + + + +R  +I  V +  D+ + +  +A R      V+S +GT++ V++RQP +      + G F ++SLSG+++
Sbjct:   77 MRRPRGRPAGSKNKPKPPVIVTRESANTLR-AHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFL 173

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8GXB3|AHL5_ARATH (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 2.136e-8
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPIL---INQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAA---TSSLSSSLTS 150
            K++RGR  G+  K  L  L   +N + G    P  I++  +  DI+  V+ F+ +   +  ++S +GT+S VTLR+P S TP+    G F ++SL G+Y+ N    +   T  LS SL+ 
Sbjct:  147 KRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISVG-SGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLREPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSG 265

[Close]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SR17|AHL19_ARATH (AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana OX=3702 GN=AHL19 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.906e-8
Identity = 32/107 (29.91%), Postives = 60/107 (56.07%), Query Frame = 0

Query:   37 PLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYR--VSFKVVSASGTISCVTLRQPDS--------QTPAFIIHGPFTLVSLSGTYI 133
            P ++ RGR  GS+NKP  PI + + + + ++   + I  + +D+I+T+  FA R      ++S +GT++ VTLRQP +              + G F ++SL+G+++
Sbjct:   78 PTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIA-SGTDVIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQGRFEILSLTGSFL 183

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL24 | AT-hook motif nuclear localized protein 24 | chr4:11984432-11985406 FORWARD LENGTH=324)

HSP 1 Score: 62.003 bits (149), Expect = 8.021e-12
Identity = 34/100 (34.00%), Postives = 63/100 (63.00%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQ-TPAFII--HGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + +R  ++  + +  D++++V  FA R      V+S +G ++ VT+RQP S  +P  ++  HG F ++SLSG+++
Sbjct:  105 RRPRGRPAGSKNKPKPPIIITRDSANALR-THVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFL 203

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL26 | AT-hook motif nuclear localized protein 26 | chr4:7220139-7221158 REVERSE LENGTH=339)

HSP 1 Score: 62.003 bits (149), Expect = 9.014e-12
Identity = 33/98 (33.67%), Postives = 61/98 (62.24%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFI-IHGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + +R  ++  + +  DI+  +  FA R      V+S +G+++ VT+RQP S   + + +HG F ++SLSG+++
Sbjct:  118 RRPRGRPAGSKNKPKAPIIITRDSANALR-THVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFL 214

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL17 | AT-hook motif nuclear localized protein 17 | chr5:20192599-20193429 FORWARD LENGTH=276)

HSP 1 Score: 61.6178 bits (148), Expect = 9.929e-12
Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFI-----IHGPFTLVSLSGTYINNNP 137
            +++ RGR  GS+NKP  P+ + +     + P YI  VP+ +D+++ + +F  R S    V+S SG+++ VTLRQP   +PA +      HG F L+S+S T++   P
Sbjct:   55 VRRPRGRPPGSKNKPKPPVFVTRDTDPPMSP-YILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQP---SPAALGSTITFHGKFDLLSVSATFLPPPP 157

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL28 | AT-hook motif nuclear localized protein 28 | chr1:4958705-4959325 REVERSE LENGTH=206)

HSP 1 Score: 58.9214 bits (141), Expect = 4.515e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPI---YINIVPNKSDIIKTVVQF--AYRVSFKVVSASGTISCVTLRQPDSQTPAFII--HGPFTLVSLSGTY 132
            + + RGR  GS+NKP  PI +       + P    YI  VP+ +D+++ + +F     + F V+S SG+++ VTLRQP    P   I  HG F L+S+S T+
Sbjct:    4 VGRPRGRPRGSKNKPKAPIFVT------IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATF 99

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL28 | AT-hook motif nuclear localized protein 28 | chr1:4958705-4959382 REVERSE LENGTH=225)

HSP 1 Score: 58.9214 bits (141), Expect = 5.270e-11
Identity = 37/102 (36.27%), Postives = 57/102 (55.88%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPI---YINIVPNKSDIIKTVVQF--AYRVSFKVVSASGTISCVTLRQPDSQTPAFII--HGPFTLVSLSGTY 132
            + + RGR  GS+NKP  PI +       + P    YI  VP+ +D+++ + +F     + F V+S SG+++ VTLRQP    P   I  HG F L+S+S T+
Sbjct:   23 VGRPRGRPRGSKNKPKAPIFVT------IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATF 118

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL16, TEK | TRANSPOSABLE ELEMENT SILENCING VIA AT-HOOK, AT-hook motif nuclear-localized protein 16 | chr2:17862497-17863270 REVERSE LENGTH=257)

HSP 1 Score: 58.5362 bits (140), Expect = 9.999e-11
Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            K+ RGR  GS+NKP  PI++   + + +R   + I  +  DI +T+  FA R      ++SA+G ++ VTLRQP S      +HG + ++SL G+ +
Sbjct:   53 KRPRGRPAGSKNKPKPPIIVTHDSPNSLRANAVEIS-SGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSGAIVTLHGRYEILSLLGSIL 148

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL18 | AT-HOOK MOTIF CONTAINING NUCLEAR LOCALIZED PROTEIN 18 | chr3:22493204-22494001 FORWARD LENGTH=265)

HSP 1 Score: 57.3806 bits (137), Expect = 3.020e-10
Identity = 37/128 (28.91%), Postives = 69/128 (53.91%), Query Frame = 0

Query:    8 ISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFK--VVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            I   L ++PS  +N           +K +P    RGR  GS+NKP  PI++ + + +  R  ++  + N  D+++++  FA R      V++ +G ++ VT+RQP     +  +HG F ++SLSG+++
Sbjct:   42 IGEDLATFPSGEENI----------KKRRP----RGRPAGSKNKPKAPIIVTRDSANAFR-CHVMEITNACDVMESLAVFARRRQRGVCVLTGNGAVTNVTVRQPGGGVVS--LHGRFEILSLSGSFL 152

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL22 | AT-hook motif nuclear-localized protein 22 | chr2:18727848-18728801 FORWARD LENGTH=317)

HSP 1 Score: 57.7658 bits (138), Expect = 3.105e-10
Identity = 34/101 (33.66%), Postives = 61/101 (60.40%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYR--VSFKVVSASGTISCVTLRQPDS----QTPAFIIHGPFTLVSLSGTYI 133
            ++ RGR  GS+NKP  PI+I + + + ++  ++  V N  D++++V  FA R      V+S +G ++ VT+RQP S     +    +HG F ++SLSG+++
Sbjct:   89 RRPRGRPAGSKNKPKPPIIITRDSANALK-SHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFL 188

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL21, GIK | GIANT KILLER, AT-hook motif nuclear localized protein 21 | chr2:14857021-14857878 FORWARD LENGTH=285)

HSP 1 Score: 55.8398 bits (133), Expect = 9.966e-10
Identity = 29/98 (29.59%), Postives = 59/98 (60.20%), Query Frame = 0

Query:   38 LKKSRGRVLGSRNKPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYI 133
            +++ RGR  GS+NKP  P+++ + + + +R  +I  V +  D+ + +  +A R      V+S +GT++ V++RQP +      + G F ++SLSG+++
Sbjct:   77 MRRPRGRPAGSKNKPKPPVIVTRESANTLR-AHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFL 173

[Close]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Match: | (Symbols: AHL5 | AT-hook motif nuclear localized protein 5 | chr1:23536831-23538863 REVERSE LENGTH=378)

HSP 1 Score: 55.4546 bits (132), Expect = 2.161e-9
Identity = 40/120 (33.33%), Postives = 65/120 (54.17%), Query Frame = 0

Query:   39 KKSRGRVLGSRNKPILPIL---INQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRV--SFKVVSASGTISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAA---TSSLSSSLTS 150
            K++RGR  G+  K  L  L   +N + G    P  I++  +  DI+  V+ F+ +   +  ++S +GT+S VTLR+P S TP+    G F ++SL G+Y+ N    +   T  LS SL+ 
Sbjct:  147 KRARGRPPGTGRKQRLANLGEWMNTSAGLAFAPHVISVG-SGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLREPASTTPSLTFEGRFEILSLGGSYLVNEEGGSKSRTGGLSVSLSG 265

The following BLAST results are available for this feature:

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
BLAST of Cc_v2.0_08270.1 vs. Araport11

BLAST of Cc_v2.0_08270.1 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
tr\|A0A151TW89\|A0A151TW89_CAJCA	2.207e-106	100.00	DNA-binding protein ESCAROLA OS=Cajanus cajan OX=3...	[more]
tr\|A0A151TW55\|A0A151TW55_CAJCA	1.015e-56	72.03	DNA-binding protein ESCAROLA OS=Cajanus cajan OX=3...	[more]
tr\|A0A0S3T4U2\|A0A0S3T4U2_PHAAN	8.344e-31	49.06	PPC domain-containing protein OS=Vigna angularis v...	[more]
tr\|A0A0L9UQU0\|A0A0L9UQU0_PHAAN	8.344e-31	49.06	PPC domain-containing protein OS=Phaseolus angular...	[more]
tr\|A0A445LFZ4\|A0A445LFZ4_GLYSO	4.044e-29	48.61	AT-hook motif nuclear-localized protein 17 OS=Glyc...	[more]
tr\|K7KGK5\|K7KGK5_SOYBN	3.067e-28	48.61	PPC domain-containing protein OS=Glycine max OX=38...	[more]
tr\|A0A1S3VMQ4\|A0A1S3VMQ4_VIGRR	1.999e-26	52.10	AT-hook motif nuclear-localized protein 17-like OS...	[more]
tr\|A0A4D6MM50\|A0A4D6MM50_VIGUN	5.356e-26	50.43	PPC domain-containing protein OS=Vigna unguiculata...	[more]
tr\|A0AA86SRR5\|A0AA86SRR5_9FABA	3.285e-25	50.36	Uncharacterized protein OS=Sphenostylis stenocarpa...	[more]
tr\|A0A1S3UA80\|A0A1S3UA80_VIGRR	6.300e-24	53.98	AT-hook motif nuclear-localized protein 17-like OS...	[more]

BLAST of Cc_v2.0_08270.1 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 10


Match Name	E-value	Identity	Description
sp\|O49662\|AHL24_ARATH	7.907e-11	34.00	AT-hook motif nuclear-localized protein 24 OS=Arab...	[more]
sp\|Q9SZ70\|AHL26_ARATH	8.893e-11	33.67	AT-hook motif nuclear-localized protein 26 OS=Arab...	[more]
sp\|Q9LTA2\|AHL17_ARATH	9.758e-11	35.51	AT-hook motif nuclear-localized protein 17 OS=Arab...	[more]
sp\|Q9M9R4\|AHL28_ARATH	4.412e-10	36.27	AT-hook motif nuclear-localized protein 28 OS=Arab...	[more]
sp\|Q9SJG4\|AHL16_ARATH	9.822e-10	35.05	AT-hook motif nuclear-localized protein 16 OS=Arab...	[more]
sp\|Q9LZX7\|AHL18_ARATH	2.970e-9	28.91	AT-hook motif nuclear-localized protein 18 OS=Arab...	[more]
sp\|O22130\|AHL22_ARATH	3.063e-9	33.66	AT-hook motif nuclear-localized protein 22 OS=Arab...	[more]
sp\|O82166\|AHL21_ARATH	9.819e-9	29.59	AT-hook motif nuclear-localized protein 21 OS=Arab...	[more]
sp\|Q8GXB3\|AHL5_ARATH	2.136e-8	33.33	AT-hook motif nuclear-localized protein 5 OS=Arabi...	[more]
sp\|Q9SR17\|AHL19_ARATH	3.906e-8	29.91	AT-hook motif nuclear-localized protein 19 OS=Arab...	[more]

BLAST of Cc_v2.0_08270.1 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 10


Match Name	E-value	Identity	Description
\|	8.021e-12	34.00	Symbols: AHL24 \| AT-hook motif nuclear localized p...	[more]
\|	9.014e-12	33.67	Symbols: AHL26 \| AT-hook motif nuclear localized p...	[more]
\|	9.929e-12	35.51	Symbols: AHL17 \| AT-hook motif nuclear localized p...	[more]
\|	4.515e-11	36.27	Symbols: AHL28 \| AT-hook motif nuclear localized p...	[more]
\|	5.270e-11	36.27	Symbols: AHL28 \| AT-hook motif nuclear localized p...	[more]
\|	9.999e-11	35.05	Symbols: AHL16, TEK \| TRANSPOSABLE ELEMENT SILENCI...	[more]
\|	3.020e-10	28.91	Symbols: AHL18 \| AT-HOOK MOTIF CONTAINING NUCLEAR ...	[more]
\|	3.105e-10	33.66	Symbols: AHL22 \| AT-hook motif nuclear-localized p...	[more]
\|	9.966e-10	29.59	Symbols: AHL21, GIK \| GIANT KILLER, AT-hook motif ...	[more]
\|	2.161e-9	33.33	Symbols: AHL5 \| AT-hook motif nuclear localized pr...	[more]

InterPro

Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.1330.80		coord: 69..151 e-value: 2.1E-6 score: 29.4
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 69..143
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 72..138 e-value: 0.036 score: 25.7
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 63..157 score: 13.364073
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 67..136 e-value: 9.26868E-9 score: 48.7358
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 31..144

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CcLG03_v2.0:50139080..50139553-
coding sequence from alignment at CcLG03_v2.0:50139080..50139553-

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_08270.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08270.1; Name=Cc_v2.0_08270.1; organism=Cajanus cajan; type=mRNA; length=474bp
ATGGTTGAATCAGGTACTGTAATTTCCTTATCGTTAGTCTCCTATCCTTC
CTCTAATGATAACAACTTTAATACTATCACTAGTTCCTCCTCTCACCAGA
AATCACAACCTTTAAAGAAGTCACGTGGTAGAGTATTAGGCTCTAGGAAT
AAACCAATACTGCCTATCCTGATTAACCAAACCAATGGGCATGGTGTAAG
ACCAATTTACATCAATATTGTTCCTAACAAATCAGATATAATTAAAACAG
TGGTCCAATTTGCCTATCGAGTTAGTTTCAAAGTTGTAAGTGCATCAGGA
ACCATTTCATGTGTAACTCTTCGCCAACCTGATTCTCAAACTCCTGCTTT
CATTATTCATGGACCTTTCACTTTAGTTTCCCTCAGTGGCACCTATATAA
ATAACAACCCTTTTGCTGCTACTTCATCATTGTCATCATCACTAACATCA
AATCTTGACTTTCTTGTCCTTTAA

protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_08270.1

>drCajCajn.Asha.2.0.Cc_v2.0_08270.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08270.1; Name=drCajCajn.Asha.2.0.Cc_v2.0_08270.1; organism=Cajanus cajan; type=polypeptide; length=157bp
MVESGTVISLSLVSYPSSNDNNFNTITSSSSHQKSQPLKKSRGRVLGSRN
KPILPILINQTNGHGVRPIYINIVPNKSDIIKTVVQFAYRVSFKVVSASG
TISCVTLRQPDSQTPAFIIHGPFTLVSLSGTYINNNPFAATSSLSSSLTS
NLDFLVL

mRNA from alignment at CcLG03_v2.0:50139080..50139553-

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>drCajCajn.Asha.2.0.Cc_v2.0_08270.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08270.1; Name=Cc_v2.0_08270.1; organism=Cajanus cajan; type=mRNA; length=474bp; location=Sequence derived from: CcLG03_v2.0:50139080..50139553- (Cajanus cajan
ATGGTTGAATCAGGTACTGTAATTTCCTTATCGTTAGTCTCCTATCCTTC
CTCTAATGATAACAACTTTAATACTATCACTAGTTCCTCCTCTCACCAGA
AATCACAACCTTTAAAGAAGTCACGTGGTAGAGTATTAGGCTCTAGGAAT
AAACCAATACTGCCTATCCTGATTAACCAAACCAATGGGCATGGTGTAAG
ACCAATTTACATCAATATTGTTCCTAACAAATCAGATATAATTAAAACAG
TGGTCCAATTTGCCTATCGAGTTAGTTTCAAAGTTGTAAGTGCATCAGGA
ACCATTTCATGTGTAACTCTTCGCCAACCTGATTCTCAAACTCCTGCTTT
CATTATTCATGGACCTTTCACTTTAGTTTCCCTCAGTGGCACCTATATAA
ATAACAACCCTTTTGCTGCTACTTCATCATTGTCATCATCACTAACATCA
AATCTTGACTTTCTTGTCCTTTAA

Coding sequence (CDS) from alignment at CcLG03_v2.0:50139080..50139553-

>drCajCajn.Asha.2.0.Cc_v2.0_08270.1 ID=drCajCajn.Asha.2.0.Cc_v2.0_08270.1; Name=Cc_v2.0_08270.1; organism=Cajanus cajan; type=CDS; length=474bp; location=Sequence derived from: CcLG03_v2.0:50139080..50139553- (Cajanus cajan
ATGGTTGAATCAGGTACTGTAATTTCCTTATCGTTAGTCTCCTATCCTTC
CTCTAATGATAACAACTTTAATACTATCACTAGTTCCTCCTCTCACCAGA
AATCACAACCTTTAAAGAAGTCACGTGGTAGAGTATTAGGCTCTAGGAAT
AAACCAATACTGCCTATCCTGATTAACCAAACCAATGGGCATGGTGTAAG
ACCAATTTACATCAATATTGTTCCTAACAAATCAGATATAATTAAAACAG
TGGTCCAATTTGCCTATCGAGTTAGTTTCAAAGTTGTAAGTGCATCAGGA
ACCATTTCATGTGTAACTCTTCGCCAACCTGATTCTCAAACTCCTGCTTT
CATTATTCATGGACCTTTCACTTTAGTTTCCCTCAGTGGCACCTATATAA
ATAACAACCCTTTTGCTGCTACTTCATCATTGTCATCATCACTAACATCA
AATCTTGACTTTCTTGTCCTTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom
IPR014476	AHL15-29

Vocabulary: **Molecular Function**
Term	Definition
GO:0003680	minor groove of adenine-thymine-rich DNA binding

Search form

Cc_v2.0_08270.1