Cc_v2.0_08296.2
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151TVU2|A0A151TVU2_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010429 PE=4 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.844e-124 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0 Query: 1 MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 1 MAASSSSLSSSDDSSPHRRRRHHRHRRDRDKDKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445FKJ0|A0A445FKJ0_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_052349 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.858e-63 Identity = 134/161 (83.23%), Postives = 141/161 (87.58%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKK+KSQSQSRGKRRR+H+ HSS S S S YS S +SSDSEHETSHRS RHK+SDRPKKNKEK++SKSHRHK QKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKSKSQSQSRGKRRRRHYHHSSDSYSSSSLSDYSRSE--------SSSDSEHETSHRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|I1NBV0|I1NBV0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100811105 PE=4 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 2.858e-63 Identity = 134/161 (83.23%), Postives = 141/161 (87.58%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKK+KSQSQSRGKRRR+H+ HSS S S S YS S +SSDSEHETSHRS RHK+SDRPKKNKEK++SKSHRHK QKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKSKSQSQSRGKRRRRHYHHSSDSYSSSSLSDYSRSE--------SSSDSEHETSHRSKRHKKSDRPKKNKEKDQSKSHRHKWQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445LG39|A0A445LG39_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_008027 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.774e-61 Identity = 139/161 (86.34%), Postives = 145/161 (90.06%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKK+KSQSQSRG+RRR+HHRHSS SDS S S S SE+SSDSEHETSHRS RHK+SDRPKKNKEK+RSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKSKSQSQSRGERRRRHHRHSSDSDSYSSSSLSDYSR------SESSSDSEHETSHRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|C6T1E5|C6T1E5_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500332 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.970e-60 Identity = 138/161 (85.71%), Postives = 144/161 (89.44%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKK+KSQSQSRG+RRR+HHRHSS SDS S S S SE+SSDSEHETSHRS RHK+SDRPKKNKEK+RSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLG DKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKSKSQSQSRGERRRRHHRHSSDSDSYSSSSLSDYSR------SESSSDSEHETSHRSKRHKKSDRPKKNKEKDRSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGHDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 185
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A4D6KQ44|A0A4D6KQ44_VIGUN (Uncharacterized protein OS=Vigna unguiculata OX=3917 GN=DEO72_LG1g1415 PE=4 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.311e-58 Identity = 141/161 (87.58%), Postives = 147/161 (91.30%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDS KIRKKTKSQS RGKRRR+ H S+SDSDSDS+SSSS+SD SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSFKIRKKTKSQS--RGKRRRR--HHHHFSNSDSDSDSHSSSSLSDYSRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 187
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0L9VD13|A0A0L9VD13_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0075180 PE=4 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.616e-56 Identity = 138/162 (85.19%), Postives = 143/162 (88.27%), Query Frame = 0 Query: 32 DKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
DKDSLKIRKKTKSQS RGKRRR+HH HSS+SDSDS S S S SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHKVKEKQHDER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKLEK+KEDKVAESKRNELLNFLNASFD
Sbjct: 30 DKDSLKIRKKTKSQS--RGKRRRRHHHHSSNSDSDSHSSSSVSDY----SRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKVKEKQHDERRSSPVQLSKFLGRDKDDDVRRSAVSGKKILLKLEKSKEDKVAESKRNELLNFLNASFD 185
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1J7IF00|A0A1J7IF00_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_01049 PE=4 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.672e-56 Identity = 123/162 (75.93%), Postives = 134/162 (82.72%), Query Frame = 0 Query: 32 DKDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
+KDSLKIRKK+KS + +RR HRHSS SDS S S SS SE+SS+SEHET+HRS RHK+SDR KKNKEK+RSKSHRHKRQKHK+KEKQH ER SSPVQLSKFLGRDKDD VRRSAVSGKKILLKL+KTKEDK AESKRNELLNFLNASFD
Sbjct: 34 NKDSLKIRKKSKSHT-----KRRYRHRHSSDSDSYSSSSLSDSSR------SESSSESEHETTHRSKRHKKSDRSKKNKEKDRSKSHRHKRQKHKLKEKQHGERISSPVQLSKFLGRDKDDSVRRSAVSGKKILLKLDKTKEDKAAESKRNELLNFLNASFD 184
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1S3VHV3|A0A1S3VHV3_VIGRR (Splicing regulatory glutamine/lysine-rich protein 1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106775138 PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 7.845e-56 Identity = 140/161 (86.96%), Postives = 145/161 (90.06%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKKTKSQS RGKRRR+HH HSS+SDSDSDS S SS S SRSE+SSDSE E SHRS RHKRSDRPKKNKEK+RSKSH HKRQKHK KEKQHDER SSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEK+KEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKTKSQS--RGKRRRRHHHHSSNSDSDSDSHSSSSVSDY--SRSESSSDSEREASHRSKRHKRSDRPKKNKEKDRSKSHHHKRQKHKEKEKQHDERRSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKSKEDKVAESKRNELLNFLNASFD 187
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Match: tr|V7BLX9|V7BLX9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G088300g PE=4 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 5.617e-55 Identity = 131/161 (81.37%), Postives = 141/161 (87.58%), Query Frame = 0 Query: 33 KDSLKIRKKTKSQSQSRGKRRRKHHRHSSHSDSDSDSDSYSSSSISDLSRSETSSDSEHETSHRSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
KDSLKIRKKTKSQS+ + + H S+SDS+SSSS+SD SRSE+SSDSEHETSHRS RHKRSDRPKKNKEK+RSKSH HKR KHKVKEKQHDER+SSPVQLSKFLGRDK+DGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD
Sbjct: 31 KDSLKIRKKTKSQSRGKRR--------RRHHHHSSNSDSHSSSSVSDYSRSESSSDSEHETSHRSKRHKRSDRPKKNKEKDRSKSHHHKRPKHKVKEKQHDERNSSPVQLSKFLGRDKNDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 183
BLAST of Cc_v2.0_08296.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177) HSP 1 Score: 120.939 bits (302), Expect = 1.502e-34 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 0 Query: 96 RSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
+S RHK+ ++PKK K+KERSKSHRHKR K++ ++K E SS PV+LSKFL RDKDDG RRSAVSGKKILLK++K+KEDK AESKRNELL FLNASFD
Sbjct: 80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177
BLAST of Cc_v2.0_08296.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:9875068-9876442 REVERSE LENGTH=177) HSP 1 Score: 120.939 bits (302), Expect = 1.502e-34 Identity = 71/98 (72.45%), Postives = 84/98 (85.71%), Query Frame = 0 Query: 96 RSNRHKRSDRPKKNKEKERSKSHRHKRQKHKVKEKQHDERSSSPVQLSKFLGRDKDDGVRRSAVSGKKILLKLEKTKEDKVAESKRNELLNFLNASFD 193
+S RHK+ ++PKK K+KERSKSHRHKR K++ ++K E SS PV+LSKFL RDKDDG RRSAVSGKKILLK++K+KEDK AESKRNELL FLNASFD
Sbjct: 80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEGEGSSGPVKLSKFLNRDKDDGERRSAVSGKKILLKVDKSKEDKAAESKRNELLKFLNASFD 177 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_08296.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 0 Position : 0 Zoom : x 1
BLAST of Cc_v2.0_08296.2 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=mRNA; length=582bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_08296.2 >drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; organism=Cajanus cajan; type=polypeptide; length=193bpback to top mRNA from alignment at CcLG03_v2.0:50403693..50406478+ Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=mRNA; length=2786bp; location=Sequence derived from: CcLG03_v2.0:50403693..50406478+ (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG03_v2.0:50403693..50406478+ >drCajCajn.Asha.2.0.Cc_v2.0_08296.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_08296.2; Name=Cc_v2.0_08296.2; organism=Cajanus cajan; type=CDS; length=582bp; location=Sequence derived from: CcLG03_v2.0:50403693..50406478+ (Cajanus cajanback to top |