Cc_v2.0_09019.2
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RIN5|A0A151RIN5_CAJCA (RNA-binding protein yqeI OS=Cajanus cajan OX=3821 GN=KK1_036165 PE=4 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 5.992e-160 Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 Query: 1 MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230 MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNK K Sbjct: 1 MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKSK 230
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445I063|A0A445I063_GLYSO (CRM domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_029624 PE=4 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 4.325e-117 Identity = 190/241 (78.84%), Postives = 204/241 (84.65%), Query Frame = 0 Query: 1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230 MAAV ASSHL+ VLRSQP S S SF S LKPL SS +TP+RHI VPPLRK LFSTSSS S L VSQ E EI DD ELETPR DFEDTQL + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT+II++PSLSK+KAEEKKKQARNLILKKQ+K RLVNK K Sbjct: 1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKMKAEEKKKQARNLILKKQVKQRLVNKSK 240
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|I1LJ84|I1LJ84_SOYBN (CRM domain-containing protein OS=Glycine max OX=3847 GN=100779359 PE=4 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 4.325e-117 Identity = 190/241 (78.84%), Postives = 204/241 (84.65%), Query Frame = 0 Query: 1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230 MAAV ASSHL+ VLRSQP S S SF S LKPL SS +TP+RHI VPPLRK LFSTSSS S L VSQ E EI DD ELETPR DFEDTQL + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT+II++PSLSK+KAEEKKKQARNLILKKQ+K RLVNK K Sbjct: 1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKMKAEEKKKQARNLILKKQVKQRLVNKSK 240
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86S3Y4|A0AA86S3Y4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS6448 PE=4 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 4.923e-116 Identity = 187/236 (79.24%), Postives = 203/236 (86.02%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL---KPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNK 228 MAAVA SSHLM VLRSQP S SF KPLF SS +TP+RH++ PPLRKSL + SSS LVVSQ GE TEI +DELE+ RGDFE+ QL S+ SPLERKREERLKLEVP L+VKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R++ILKKQLKPRLVNK Sbjct: 1 MAAVAAASSHLMFVLRSQPLSPSPSSSFFSFLKPLFVSSPISVSTPLRHVYFPPLRKSLVAPSSS---LVVSQDGEETEIANDELESERGDFEEAQLGSTSSPLERKREERLKLEVPGLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSVSKLKAEEKKKQVRSVILKKQLKPRLVNK 233
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FA38|A0A371FA38_MUCPR (YqeI OS=Mucuna pruriens OX=157652 GN=yqeI PE=4 SV=1) HSP 1 Score: 343.969 bits (881), Expect = 5.670e-116 Identity = 193/242 (79.75%), Postives = 207/242 (85.54%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSANT---PIRHIHVPP-LRKSLFSTSSSSSSLV-VSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKVV 232 MAAVA S HLM VLRS P SPSS FS LKPL S NT P+RHIHVPP +RK+LF++ S+SS + VSQ GE T+I DDELET RGDFEDTQLD S SPLERKREERLKLEVPSL+VKERKELASYAHSLG+KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPGE DDVVKQLEEATGSVAVGQIGRT+II++PSLSKLKAEEKKKQ R ILKKQLKPRLVNK K V Sbjct: 1 MAAVAGASCHLMFVLRSHPLSASPSS-LFSLLKPLLVPSPNTVYTPLRHIHVPPPVRKTLFTSLFSTSSSLSVSQDGEETDIADDELETERGDFEDTQLDPSSSPLERKREERLKLEVPSLSVKERKELASYAHSLGEKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGEFDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKLKAEEKKKQVRKFILKKQLKPRLVNKAKAV 241
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|C6TB79|C6TB79_SOYBN (CRM domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 340.887 bits (873), Expect = 1.193e-115 Identity = 188/241 (78.01%), Postives = 201/241 (83.40%), Query Frame = 0 Query: 1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230 MAAV ASSHL+ VLRSQP S S SF S LKPL SS +TP+RHI VPPLRK LFSTSSS S L VSQ E EI DD ELETPR DFEDTQL + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT II++PS SK+KAEEKKKQARNLI KKQ+K RLVNK K Sbjct: 1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTFIIYRPSFSKMKAEEKKKQARNLIFKKQVKQRLVNKSK 240
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|V7AET8|V7AET8_PHAVU (CRM domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G040400g PE=4 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 3.405e-115 Identity = 183/238 (76.89%), Postives = 200/238 (84.03%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL--KPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKV 231 MAAVA SSHLM VLRSQP S F KPL SS N TP+RH+H PPLRKSLFS SSS LVVSQ GE TEIV+DEL++ RG+ D QLDS+ SPL KREERLKLEVPSL+VKERKEL+SYAHSLGDKLKTQLVGKSGVT+NVATSF+ETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQ+GRTVI+++PS SKLK EEKKKQ RNLILKKQL PR+VNK +V Sbjct: 1 MAAVAAASSHLMFVLRSQPLSPSPSSFFSFLKPLLVSSRNSVSTPLRHVHFPPLRKSLFSISSS---LVVSQDGEETEIVNDELDSERGNLGDVQLDSTSSPLVEKREERLKLEVPSLSVKERKELSSYAHSLGDKLKTQLVGKSGVTANVATSFVETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQVGRTVILYRPSASKLKTEEKKKQVRNLILKKQLNPRMVNKSRV 235
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LDY2|A0A8B8LDY2_ABRPR (Uncharacterized protein LOC113864713 isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113864713 PE=4 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 2.574e-99 Identity = 177/245 (72.24%), Postives = 197/245 (80.41%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETP--RGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLI-----LKKQLKPRLVNKVK 230 MAAVA S HLM +LRSQP SPSS F SFLKPL SS N T ++HI++PPLRK+L + S+SS +S +V E ++ E RGDFEDTQL SS SPLERKREERL L++PSLTVKERKELASYAHSLG KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPG LDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R LI L+KQLKPR V KVK Sbjct: 1 MAAVAAASYHLMHLLRSQPLSTSPSS-FISFLKPLLVSSPNALSTRLQHINLPPLRKTLVPSLFSTSSSSLSVSQDVEETETEDEELETERGDFEDTQLGSSSSPLERKREERLNLKLPSLTVKERKELASYAHSLGKKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGVLDDVVKQLEEATGSVAVGQIGRTLIIYRPSISKLKAEEKKKQVRKLILRKELLRKQLKPRPVKKVK 244
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LEH5|A0A8B8LEH5_ABRPR (Uncharacterized protein LOC113864713 isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113864713 PE=4 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 3.995e-98 Identity = 175/243 (72.02%), Postives = 195/243 (80.25%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETP--RGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLI-----LKKQLKPRLVNK 228 MAAVA S HLM +LRSQP SPSS F SFLKPL SS N T ++HI++PPLRK+L + S+SS +S +V E ++ E RGDFEDTQL SS SPLERKREERL L++PSLTVKERKELASYAHSLG KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPG LDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R LI L+KQLKPR V K Sbjct: 1 MAAVAAASYHLMHLLRSQPLSTSPSS-FISFLKPLLVSSPNALSTRLQHINLPPLRKTLVPSLFSTSSSSLSVSQDVEETETEDEELETERGDFEDTQLGSSSSPLERKREERLNLKLPSLTVKERKELASYAHSLGKKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGVLDDVVKQLEEATGSVAVGQIGRTLIIYRPSISKLKAEEKKKQVRKLILRKELLRKQLKPRPVKK 242
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SDV5|A0A0S3SDV5_PHAAN (CRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G227500 PE=4 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 3.007e-96 Identity = 181/239 (75.73%), Postives = 193/239 (80.75%), Query Frame = 0 Query: 1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL---KPLFFSSANT---PIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKV 231 MAAVA SSHLM VLR QP P S SF KPL SS N+ P + PPLRKSL S SSS S+ GE TEI DDEL++ RGDF DTQLDS+ SPL RKREERLKLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRT+II++PS +KLK EEKKKQ RN ILKKQL RLVNK +V Sbjct: 1 MAAVAAISSHLMFVLRLQPLPLSPSSSFFSFLKPLLVSSPNSISRPFPRLQFPPLRKSLCSISSSVVV---SEDGEETEIGDDELDSERGDFGDTQLDSTSSPLVRKREERLKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSATKLKEEEKKKQVRNFILKKQLNSRLVNKSRV 236
BLAST of Cc_v2.0_09019.2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P54454|YQEI_BACSU (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.407e-8 Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 0 Query: 111 LTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199 LT K+++ L S AH L + VGK GV N+ E LEA EL+K+ + ++C + +DV + L + + S V IG T++++K S Sbjct: 2 LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDVAEALVKGSRSQLVQTIGNTIVLYKES 87
BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:9136451-9137267 REVERSE LENGTH=222) HSP 1 Score: 155.221 bits (391), Expect = 8.981e-47 Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 0 Query: 85 EDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQ 211 +D Q D S + RE R + L+ KE+++LASYAH LGDKLK+QLVGKSGVT +V SF+ETLE NELLK+KIHR+CPGEL+D++ +LEEATGSV+VGQI RTVI+++PS +KLKA+E KK+ Sbjct: 94 DDGQEDGSELTMVSMRENR-RSSALELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVSVGQIARTVILYRPSPTKLKADEDKKR 219
BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: CFM4 | CRM family member subfamily 4 | chr4:18189292-18190535 REVERSE LENGTH=280) HSP 1 Score: 139.428 bits (350), Expect = 4.863e-40 Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0 Query: 2 AAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVP--------PL---RKSLFSTSSSS----------------------------------SSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199 A+ +S+HL+ L P P S FL+P FS++ + H + P PL SL S SS S +VVS+ G I D E + D + + + ++ R LKL ++KE+KELASYAHSLGDKLK QLVGKSGVT +V SF+ETLE NELLK+KI ++ P EL+D V+ LEEATGSVAVGQIGRTVI+++PS Sbjct: 8 ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERG----IEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKL-----SIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPS 241
BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: CFM4 | CRM family member subfamily 4 | chr4:18189249-18190535 REVERSE LENGTH=296) HSP 1 Score: 139.428 bits (350), Expect = 6.849e-40 Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0 Query: 2 AAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVP--------PL---RKSLFSTSSSS----------------------------------SSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199 A+ +S+HL+ L P P S FL+P FS++ + H + P PL SL S SS S +VVS+ G I D E + D + + + ++ R LKL ++KE+KELASYAHSLGDKLK QLVGKSGVT +V SF+ETLE NELLK+KI ++ P EL+D V+ LEEATGSVAVGQIGRTVI+++PS Sbjct: 8 ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERG----IEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKL-----SIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPS 241 The following BLAST results are available for this feature:
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL) Total hits: 10
BLAST of Cc_v2.0_09019.2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot ) Total hits: 1
BLAST of Cc_v2.0_09019.2 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11) Total hits: 3
InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
Sequences
The
following sequences are available for this feature:
mRNA sequence >drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=mRNA; length=714bpback to top protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09019.2 >drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; organism=Cajanus cajan; type=polypeptide; length=237bpback to top mRNA from alignment at CcLG04_v2.0:3879480..3881440- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=mRNA; length=1961bp; location=Sequence derived from: CcLG04_v2.0:3879480..3881440- (Cajanus cajanback to top Coding sequence (CDS) from alignment at CcLG04_v2.0:3879480..3881440- >drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=CDS; length=714bp; location=Sequence derived from: CcLG04_v2.0:3879480..3881440- (Cajanus cajanback to top |