Cc_v2.0_09019.2

Transcript Overview
NameCc_v2.0_09019.2
Unique NamedrCajCajn.Asha.2.0.Cc_v2.0_09019.2
TypemRNA
OrganismCajanus cajan (pigeon pea)
Sequence length714
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CcLG04_v2.0chromosomeCcLG04_v2.0:3879480..3881440 -Cajanus cajan cv. Asha genome v2.0n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
avjccaL078Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0251Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
avjccaL553Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjccaL555Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
anccaL0734Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1030Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anccaL1080Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
carccaL375Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL377Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
carccaL479Cicer arietinum cv. CDC Frontier genome v2.0Cicer arietinum
ccavrvR392Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavrvR416Vigna radiata cv. VC1973A genome v6.0Vigna radiata
ccavfhR376Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccavfhR401Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR443Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavfhR428Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
ccapvR501Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
ccavssR425Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR457Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR477Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccavssR483Vicia sativa cv. Studenica genome v1.0Vicia sativa
ccccaL0867Cajanus cajan Asha genome v1.0Cajanus cajan
ccavumR444Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR449Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavumR450Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR371Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccavumR476Vigna umbellata FF25 genome v1.0Vigna umbellata
ccavuR398Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
ccccaL1370Cajanus cajan Asha genome v1.0Cajanus cajan
ccavunR319Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccavunR326Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR453Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccavunR342Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
ccapvfR506Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
ccapvfR508Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Cc_v2.0_09019drCajCajn.Asha.2.0.Cc_v2.0_09019Cajanus cajangene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09019.2.exon2drCajCajn.Asha.2.0.Cc_v2.0_09019.2.exon2Cajanus cajanexon
Cc_v2.0_09019.2.exon1drCajCajn.Asha.2.0.Cc_v2.0_09019.2.exon1Cajanus cajanexon


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09019.2.utr3p1drCajCajn.Asha.2.0.Cc_v2.0_09019.2.utr3p1Cajanus cajanthree_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.Cc_v2.0_09019.2drCajCajn.Asha.2.0.cds.Cc_v2.0_09019.2Cajanus cajanCDS
cds.Cc_v2.0_09019.2drCajCajn.Asha.2.0.cds.Cc_v2.0_09019.2_2Cajanus cajanCDS


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Cc_v2.0_09019.2.utr5p1drCajCajn.Asha.2.0.Cc_v2.0_09019.2.utr5p1Cajanus cajanfive_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
drCajCajn.Asha.2.0.Cc_v2.0_09019.2drCajCajn.Asha.2.0.Cc_v2.0_09019.2Cajanus cajanpolypeptide
drCajCajn.Asha.2.0.Cc_v2.0_09019.2drCajCajn.Asha.2.0.Cc_v2.0_09019.2-proteinCajanus cajanpolypeptide


Homology
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A151RIN5|A0A151RIN5_CAJCA (RNA-binding protein yqeI OS=Cajanus cajan OX=3821 GN=KK1_036165 PE=4 SV=1)

HSP 1 Score: 452.595 bits (1163), Expect = 5.992e-160
Identity = 229/230 (99.57%), Postives = 229/230 (99.57%), Query Frame = 0 
Query:    1 MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230
            MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNK K
Sbjct:    1 MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKSK 230
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A445I063|A0A445I063_GLYSO (CRM domain-containing protein OS=Glycine soja OX=3848 GN=D0Y65_029624 PE=4 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.325e-117
Identity = 190/241 (78.84%), Postives = 204/241 (84.65%), Query Frame = 0 
Query:    1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230
            MAAV  ASSHL+ VLRSQP S S SF S LKPL  SS    +TP+RHI VPPLRK LFSTSSS S L VSQ  E     EI DD  ELETPR DFEDTQL  + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT+II++PSLSK+KAEEKKKQARNLILKKQ+K RLVNK K
Sbjct:    1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKMKAEEKKKQARNLILKKQVKQRLVNKSK 240
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|I1LJ84|I1LJ84_SOYBN (CRM domain-containing protein OS=Glycine max OX=3847 GN=100779359 PE=4 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 4.325e-117
Identity = 190/241 (78.84%), Postives = 204/241 (84.65%), Query Frame = 0 
Query:    1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230
            MAAV  ASSHL+ VLRSQP S S SF S LKPL  SS    +TP+RHI VPPLRK LFSTSSS S L VSQ  E     EI DD  ELETPR DFEDTQL  + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT+II++PSLSK+KAEEKKKQARNLILKKQ+K RLVNK K
Sbjct:    1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKMKAEEKKKQARNLILKKQVKQRLVNKSK 240
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA86S3Y4|A0AA86S3Y4_9FABA (Uncharacterized protein OS=Sphenostylis stenocarpa OX=92480 GN=AYBTSS11_LOCUS6448 PE=4 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 4.923e-116
Identity = 187/236 (79.24%), Postives = 203/236 (86.02%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL---KPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNK 228
            MAAVA  SSHLM VLRSQP   S   SF    KPLF SS    +TP+RH++ PPLRKSL + SSS   LVVSQ GE TEI +DELE+ RGDFE+ QL S+ SPLERKREERLKLEVP L+VKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R++ILKKQLKPRLVNK
Sbjct:    1 MAAVAAASSHLMFVLRSQPLSPSPSSSFFSFLKPLFVSSPISVSTPLRHVYFPPLRKSLVAPSSS---LVVSQDGEETEIANDELESERGDFEEAQLGSTSSPLERKREERLKLEVPGLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSVSKLKAEEKKKQVRSVILKKQLKPRLVNK 233
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A371FA38|A0A371FA38_MUCPR (YqeI OS=Mucuna pruriens OX=157652 GN=yqeI PE=4 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 5.670e-116
Identity = 193/242 (79.75%), Postives = 207/242 (85.54%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSANT---PIRHIHVPP-LRKSLFSTSSSSSSLV-VSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKVV 232
            MAAVA  S HLM VLRS P   SPSS  FS LKPL   S NT   P+RHIHVPP +RK+LF++  S+SS + VSQ GE T+I DDELET RGDFEDTQLD S SPLERKREERLKLEVPSL+VKERKELASYAHSLG+KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPGE DDVVKQLEEATGSVAVGQIGRT+II++PSLSKLKAEEKKKQ R  ILKKQLKPRLVNK K V
Sbjct:    1 MAAVAGASCHLMFVLRSHPLSASPSS-LFSLLKPLLVPSPNTVYTPLRHIHVPPPVRKTLFTSLFSTSSSLSVSQDGEETDIADDELETERGDFEDTQLDPSSSPLERKREERLKLEVPSLSVKERKELASYAHSLGEKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGEFDDVVKQLEEATGSVAVGQIGRTLIIYRPSLSKLKAEEKKKQVRKFILKKQLKPRLVNKAKAV 241
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|C6TB79|C6TB79_SOYBN (CRM domain-containing protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 1.193e-115
Identity = 188/241 (78.01%), Postives = 201/241 (83.40%), Query Frame = 0 
Query:    1 MAAV--ASSHLMLVLRSQP-SPSSSFFSFLKPLFFSS---ANTPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEV---TEIVDD--ELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVK 230
            MAAV  ASSHL+ VLRSQP S S SF S LKPL  SS    +TP+RHI VPPLRK LFSTSSS S L VSQ  E     EI DD  ELETPR DFEDTQL  + SPLERKR+E +KLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVT N+ATSFIETLEANELLKIKIHR+CPGELDDVVKQLEEATGSVAVGQIGRT II++PS SK+KAEEKKKQARNLI KKQ+K RLVNK K
Sbjct:    1 MAAVVSASSHLLFVLRSQPLSSSPSFISLLKPLLVSSPYAVSTPLRHIQVPPLRKPLFSTSSSPS-LTVSQDSEELEEKEIADDDDELETPRRDFEDTQLGPTCSPLERKRKESVKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTPNLATSFIETLEANELLKIKIHRTCPGELDDVVKQLEEATGSVAVGQIGRTFIIYRPSFSKMKAEEKKKQARNLIFKKQVKQRLVNKSK 240
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|V7AET8|V7AET8_PHAVU (CRM domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G040400g PE=4 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 3.405e-115
Identity = 183/238 (76.89%), Postives = 200/238 (84.03%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL--KPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKV 231
            MAAVA  SSHLM VLRSQP   S    F   KPL  SS N   TP+RH+H PPLRKSLFS SSS   LVVSQ GE TEIV+DEL++ RG+  D QLDS+ SPL  KREERLKLEVPSL+VKERKEL+SYAHSLGDKLKTQLVGKSGVT+NVATSF+ETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQ+GRTVI+++PS SKLK EEKKKQ RNLILKKQL PR+VNK +V
Sbjct:    1 MAAVAAASSHLMFVLRSQPLSPSPSSFFSFLKPLLVSSRNSVSTPLRHVHFPPLRKSLFSISSS---LVVSQDGEETEIVNDELDSERGNLGDVQLDSTSSPLVEKREERLKLEVPSLSVKERKELSSYAHSLGDKLKTQLVGKSGVTANVATSFVETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQVGRTVILYRPSASKLKTEEKKKQVRNLILKKQLNPRMVNKSRV 235
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LDY2|A0A8B8LDY2_ABRPR (Uncharacterized protein LOC113864713 isoform X1 OS=Abrus precatorius OX=3816 GN=LOC113864713 PE=4 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 2.574e-99
Identity = 177/245 (72.24%), Postives = 197/245 (80.41%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETP--RGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLI-----LKKQLKPRLVNKVK 230
            MAAVA  S HLM +LRSQP   SPSS F SFLKPL  SS N   T ++HI++PPLRK+L  +  S+SS  +S   +V E   ++ E    RGDFEDTQL SS SPLERKREERL L++PSLTVKERKELASYAHSLG KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPG LDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R LI     L+KQLKPR V KVK
Sbjct:    1 MAAVAAASYHLMHLLRSQPLSTSPSS-FISFLKPLLVSSPNALSTRLQHINLPPLRKTLVPSLFSTSSSSLSVSQDVEETETEDEELETERGDFEDTQLGSSSSPLERKREERLNLKLPSLTVKERKELASYAHSLGKKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGVLDDVVKQLEEATGSVAVGQIGRTLIIYRPSISKLKAEEKKKQVRKLILRKELLRKQLKPRPVKKVK 244
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8B8LEH5|A0A8B8LEH5_ABRPR (Uncharacterized protein LOC113864713 isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113864713 PE=4 SV=1)

HSP 1 Score: 296.59 bits (758), Expect = 3.995e-98
Identity = 175/243 (72.02%), Postives = 195/243 (80.25%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQP---SPSSSFFSFLKPLFFSSAN---TPIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETP--RGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLI-----LKKQLKPRLVNK 228
            MAAVA  S HLM +LRSQP   SPSS F SFLKPL  SS N   T ++HI++PPLRK+L  +  S+SS  +S   +V E   ++ E    RGDFEDTQL SS SPLERKREERL L++PSLTVKERKELASYAHSLG KLKTQLVGKSGVTSN+ATSFIETLEANELLKIKIHRSCPG LDDVVKQLEEATGSVAVGQIGRT+II++PS+SKLKAEEKKKQ R LI     L+KQLKPR V K
Sbjct:    1 MAAVAAASYHLMHLLRSQPLSTSPSS-FISFLKPLLVSSPNALSTRLQHINLPPLRKTLVPSLFSTSSSSLSVSQDVEETETEDEELETERGDFEDTQLGSSSSPLERKREERLNLKLPSLTVKERKELASYAHSLGKKLKTQLVGKSGVTSNLATSFIETLEANELLKIKIHRSCPGVLDDVVKQLEEATGSVAVGQIGRTLIIYRPSISKLKAEEKKKQVRKLILRKELLRKQLKPRPVKK 242
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A0S3SDV5|A0A0S3SDV5_PHAAN (CRM domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G227500 PE=4 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.007e-96
Identity = 181/239 (75.73%), Postives = 193/239 (80.75%), Query Frame = 0 
Query:    1 MAAVA--SSHLMLVLRSQPSPSSSFFSFL---KPLFFSSANT---PIRHIHVPPLRKSLFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQARNLILKKQLKPRLVNKVKV 231
            MAAVA  SSHLM VLR QP P S   SF    KPL  SS N+   P   +  PPLRKSL S SSS      S+ GE TEI DDEL++ RGDF DTQLDS+ SPL RKREERLKLEVPSL+VKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRT+II++PS +KLK EEKKKQ RN ILKKQL  RLVNK +V
Sbjct:    1 MAAVAAISSHLMFVLRLQPLPLSPSSSFFSFLKPLLVSSPNSISRPFPRLQFPPLRKSLCSISSSVVV---SEDGEETEIGDDELDSERGDFGDTQLDSTSSPLVRKREERLKLEVPSLSVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTLIIYRPSATKLKEEEKKKQVRNFILKKQLNSRLVNKSRV 236
[Close]
BLAST of Cc_v2.0_09019.2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P54454|YQEI_BACSU (Probable RNA-binding protein YqeI OS=Bacillus subtilis (strain 168) OX=224308 GN=yqeI PE=4 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.407e-8
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 0 
Query:  111 LTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199
            LT K+++ L S AH L    +   VGK GV  N+     E LEA EL+K+ + ++C  + +DV + L + + S  V  IG T++++K S
Sbjct:    2 LTGKQKRFLRSKAHHLTPIFQ---VGKGGVNDNMIKQIAEALEARELIKVSVLQNCEEDKNDVAEALVKGSRSQLVQTIGNTIVLYKES 87
[Close]
BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:9136451-9137267 REVERSE LENGTH=222)

HSP 1 Score: 155.221 bits (391), Expect = 8.981e-47
Identity = 78/127 (61.42%), Postives = 101/127 (79.53%), Query Frame = 0 
Query:   85 EDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSLSKLKAEEKKKQ 211
            +D Q D S   +   RE R +     L+ KE+++LASYAH LGDKLK+QLVGKSGVT +V  SF+ETLE NELLK+KIHR+CPGEL+D++ +LEEATGSV+VGQI RTVI+++PS +KLKA+E KK+
Sbjct:   94 DDGQEDGSELTMVSMRENR-RSSALELSAKEKRKLASYAHHLGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVSVGQIARTVILYRPSPTKLKADEDKKR 219
[Close]
BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: CFM4 | CRM family member subfamily 4 | chr4:18189292-18190535 REVERSE LENGTH=280)

HSP 1 Score: 139.428 bits (350), Expect = 4.863e-40
Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0 
Query:    2 AAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVP--------PL---RKSLFSTSSSS----------------------------------SSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199
            A+ +S+HL+  L   P P S    FL+P  FS++ +   H + P        PL     SL   S SS                                  S +VVS+ G    I D E      +  D +  +  +  ++ R   LKL     ++KE+KELASYAHSLGDKLK QLVGKSGVT +V  SF+ETLE NELLK+KI ++ P EL+D V+ LEEATGSVAVGQIGRTVI+++PS
Sbjct:    8 ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERG----IEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKL-----SIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPS 241
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BLAST of Cc_v2.0_09019.2 vs. Araport11
Match: | (Symbols: CFM4 | CRM family member subfamily 4 | chr4:18189249-18190535 REVERSE LENGTH=296)

HSP 1 Score: 139.428 bits (350), Expect = 6.849e-40
Identity = 100/243 (41.15%), Postives = 130/243 (53.50%), Query Frame = 0 
Query:    2 AAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVP--------PL---RKSLFSTSSSS----------------------------------SSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKREERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIETLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPS 199
            A+ +S+HL+  L   P P S    FL+P  FS++ +   H + P        PL     SL   S SS                                  S +VVS+ G    I D E      +  D +  +  +  ++ R   LKL     ++KE+KELASYAHSLGDKLK QLVGKSGVT +V  SF+ETLE NELLK+KI ++ P EL+D V+ LEEATGSVAVGQIGRTVI+++PS
Sbjct:    8 ASCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSKPLPCHSASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERG----IEDSEASEEVSEIGDKEEKTENTKKKKSRGSALKL-----SIKEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPS 241
The following BLAST results are available for this feature:
BLAST of Cc_v2.0_09019.2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
tr|A0A151RIN5|A0A151RIN5_CAJCA5.992e-16099.57RNA-binding protein yqeI OS=Cajanus cajan OX=3821 ... [more]
tr|A0A445I063|A0A445I063_GLYSO4.325e-11778.84CRM domain-containing protein OS=Glycine soja OX=3... [more]
tr|I1LJ84|I1LJ84_SOYBN4.325e-11778.84CRM domain-containing protein OS=Glycine max OX=38... [more]
tr|A0AA86S3Y4|A0AA86S3Y4_9FABA4.923e-11679.24Uncharacterized protein OS=Sphenostylis stenocarpa... [more]
tr|A0A371FA38|A0A371FA38_MUCPR5.670e-11679.75YqeI OS=Mucuna pruriens OX=157652 GN=yqeI PE=4 SV=... [more]
tr|C6TB79|C6TB79_SOYBN1.193e-11578.01CRM domain-containing protein OS=Glycine max OX=38... [more]
tr|V7AET8|V7AET8_PHAVU3.405e-11576.89CRM domain-containing protein OS=Phaseolus vulgari... [more]
tr|A0A8B8LDY2|A0A8B8LDY2_ABRPR2.574e-9972.24Uncharacterized protein LOC113864713 isoform X1 OS... [more]
tr|A0A8B8LEH5|A0A8B8LEH5_ABRPR3.995e-9872.02Uncharacterized protein LOC113864713 isoform X2 OS... [more]
tr|A0A0S3SDV5|A0A0S3SDV5_PHAAN3.007e-9675.73CRM domain-containing protein OS=Vigna angularis v... [more]
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BLAST of Cc_v2.0_09019.2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs UniProt Swissprot )
Total hits: 1
Match NameE-valueIdentityDescription
sp|P54454|YQEI_BACSU1.407e-835.96Probable RNA-binding protein YqeI OS=Bacillus subt... [more]
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BLAST of Cc_v2.0_09019.2 vs. Araport11
Analysis Date: 2024-07-30 (Blastp of Cajanus cajan cv. Asha v2.0 proteins vs arabidopsis Araport11)
Total hits: 3
Match NameE-valueIdentityDescription
|8.981e-4761.42Symbols: no symbol available | no full name availa... [more]
|4.863e-4041.15Symbols: CFM4 | CRM family member subfamily 4 | ch... [more]
|6.849e-4041.15Symbols: CFM4 | CRM family member subfamily 4 | ch... [more]
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InterPro
Analysis Name: InterProScan Analysis for Cajanus cajan cv. Asha genome v2.0
Date Performed: 2024-07-30
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableFUNFAMG3DSA:3.30.110.60:FF:000004coord: 110..209
e-value: 1.2E-50
score: 171.4
NoneNo IPR availablePANTHERPTHR47714CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSEDcoord: 3..226
IPR035920YhbY-like superfamilyGENE3D3.30.110.60coord: 110..215
e-value: 2.4E-26
score: 93.6
IPR035920YhbY-like superfamilySUPERFAMILY75471YhbY-likecoord: 110..199
IPR001890RNA-binding, CRM domainPFAMPF01985CRS1_YhbYcoord: 111..197
e-value: 4.1E-15
score: 67.2
IPR001890RNA-binding, CRM domainPROSITEPS51295CRMcoord: 109..208
score: 16.380445

Sequences
The following sequences are available for this feature:

mRNA sequence

>drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=mRNA; length=714bp
ATGGCGGCAGTGGCATCCTCTCATCTAATGCTTGTTCTTCGTTCACAACC
ATCGccttcttcttctttcttttcctttctcaaaccccttttcttttcct
CTGCCAATACACCCATTCGACACATCCACGTTCCACCGCTTCGAAAATCT
ctcttctccacctcttcctcttcctcttcccttGTTGTTTCTCAAGGTGG
CGAAGTAACAGAGATTGTGGATGATGAATTGGAAACCCCAAGGGGAGATT
TTGAAGATACCCAATTGGATTCAAGTTTGTCGCCGTTGGAGAGAAAGAGG
GAGGAGAGGCTGAAGCTGGAGGTGCCGAGTCTCACTGTGAAAGAAAGGAA
AGAGCTTGCGTCTTATGCTCACAGTTTGGGGGATAAACTCAAGACCCAGT
TGGTGGGTAAGTCTGGAGTTACCTCCAACGTTGCCACTTCTTTCATTGAG
ACCCTTGAAGCCAACGAGCTTCTCAAGATTAAAATACATAGGAGCTGTCC
AGGCGAGTTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACCGGTTCAG
TGGCTGTCGGTCAGATCGGTCGAACGGTGATTATATTCAAGCCCAGTCTC
TCCAAATTGAAGGCAGAAGAAAAGAAGAAACAAGCTCGTAACCTTATTCT
GAAAAAACAACTAAAACCAAGACTGGTAAACAAGGTAAAGGTTGTGCATT
TATGTTGTGCATAA
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protein sequence of drCajCajn.Asha.2.0.Cc_v2.0_09019.2

>drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; organism=Cajanus cajan; type=polypeptide; length=237bp
MAAVASSHLMLVLRSQPSPSSSFFSFLKPLFFSSANTPIRHIHVPPLRKS
LFSTSSSSSSLVVSQGGEVTEIVDDELETPRGDFEDTQLDSSLSPLERKR
EERLKLEVPSLTVKERKELASYAHSLGDKLKTQLVGKSGVTSNVATSFIE
TLEANELLKIKIHRSCPGELDDVVKQLEEATGSVAVGQIGRTVIIFKPSL
SKLKAEEKKKQARNLILKKQLKPRLVNKVKVVHLCCA
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mRNA from alignment at CcLG04_v2.0:3879480..3881440-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=mRNA; length=1961bp; location=Sequence derived from: CcLG04_v2.0:3879480..3881440- (Cajanus cajan
AATAGTTCATCCAAACTGAAATGGCGGCAGTGGCATCCTCTCATCTAATG
CTTGTTCTTCGTTCACAACCATCGCCTTCTTCTTCTTTCTTTTCCTTTCT
CAAACCCCTTTTCTTTTCCTCTGCCAATACACCCATTCGACACATCCACG
TTCCACCGCTTCGAAAATCTCTCTTCTCCACCTCTTCCTCTTCCTCTTCC
CTTGTTGTTTCTCAAGGTGGCGAAGTAACAGAGATTGTGGATGATGAATT
GGAAACCCCAAGGGGAGATTTTGAAGATACCCAATTGGATTCAAGTTTGT
CGCCGTTGGAGAGAAAGAGGGAGGAGAGGCTGAAGCTGGAGGTGCCGAGT
CTCACTGTGAAAGAAAGGAAAGAGCTTGCGTCTTATGCTCACAGTTTGGG
GGATAAACTCAAGACCCAGTTGGTGGGTAAGTCTGGAGTTACCTCCAACG
TTGCCACTTCTTTCATTGAGACCCTTGAAGCCAACGAGCTTCTCAAGGTA
CCAATCAATTACCTCAATTTTTATCTTCCACTGTTCATAATGTTTCCGCG
TATTGTGTTCTGAAAAAAAAAAAAATATCGGTTTTGCTGTGGTTGTTGTT
TGTGTTTGATGAATTTTGCTAATACTTGGAAAAAGGAACTTGTTTGTTTA
CTGCTTCTTTTTTCCTTGGCCAGTGTAAGTTTGGTTGGTGTTTTTATAAT
TTGGCATGTTTCCAGACATTTTGTCAGATTTTTTCTCTTCGATTTCTTGC
TTAATTGGTTCACTGTTTCTCAATGTAGCTTTATTGTACATGCTTTTATG
TTGTGATTTAGGACGGTTGGACTTTTGAACCAGTTGTTGATGGTAGTAGT
TGAGTTGTTCTTGCTTGTAAGTTATTGCTGATTACGCCTTTGTAATTTTG
CACAGCTTCTTTAGGATCTGCTTGGCTGATTGTTACTTGAATGATTTTCA
TAAACTTCAATGTTTTACTTAAATTGGTCCAAGTATCTGGTGGCTGGGGG
GGGGGGTTGATTTACTTTGCATGCCTAGAAAACAAAATGCGAGATTCACT
GATGTCTGGGTGGATTTTATCTTGACTTAGTCAGCAAATTAGGCTGTTGT
AGGCTTGAGACTGTAGTGAGTCATCTTTTAGCCCACATAATGTGTCTACG
ATTGTGTTCATCTTCTGTTTCCCCTCTTGCTTTGTAACTAGTAAAATGCA
AAAGTTTTAAGTTTTTCAAAATCTTGGATCCTGATTTTCAATCTGGATGG
TATTTACAGATTAAAATACATAGGAGCTGTCCAGGCGAGTTAGATGATGT
GGTGAAGCAGTTGGAAGAAGCAACCGGTTCAGTGGCTGTCGGTCAGATCG
GTCGAACGGTGATTATATTCAAGCCCAGTCTCTCCAAATTGAAGGCAGAA
GAAAAGAAGAAACAAGCTCGTAACCTTATTCTGAAAAAACAACTAAAACC
AAGACTGGTAAACAAGGTAAAGGTTGTGCATTTATGTTGTGCATAAGCTA
TCCTGCTCTATTGCTACTTTTCCCTAATGCTCTCGTGAAACTGCAGAGTA
AGGAACAAGTACCCAAATTATCGCGGCCTGGTTCATCATGGAAAGGAAGA
AACCGTAGGTCATAAACATATTGTAATAGTGTCGAGTTTTGTCCTGGTGC
TTGGTCTGAGCGAGCTTGAGGCTTTCCTTGTATAAAACCAATGGTCAAGG
AGCTGGACATTTTATTGGTAAAAGAAAGTTCAGTTAAATTAAAGCTCATT
TTGGATCAAAGAACGCTTGCATACGGTGATAGGATGTGTTTGTGACCACA
GCGAGAGAATGCTACAGATCTTTAACCAAGTTTGGTTAGGATTGTGGAAA
GACAAAATCAGTAGATTCTATTATGATAAACATATTGTATTTGCAATTAT
TACTTGATCTATTGAACATATTGTATTGGCAAATATAATAATCCCTTGAT
TAATCAACCAC
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Coding sequence (CDS) from alignment at CcLG04_v2.0:3879480..3881440-

>drCajCajn.Asha.2.0.Cc_v2.0_09019.2 ID=drCajCajn.Asha.2.0.Cc_v2.0_09019.2; Name=Cc_v2.0_09019.2; organism=Cajanus cajan; type=CDS; length=714bp; location=Sequence derived from: CcLG04_v2.0:3879480..3881440- (Cajanus cajan
ATGGCGGCAGTGGCATCCTCTCATCTAATGCTTGTTCTTCGTTCACAACC
ATCGCCTTCTTCTTCTTTCTTTTCCTTTCTCAAACCCCTTTTCTTTTCCT
CTGCCAATACACCCATTCGACACATCCACGTTCCACCGCTTCGAAAATCT
CTCTTCTCCACCTCTTCCTCTTCCTCTTCCCTTGTTGTTTCTCAAGGTGG
CGAAGTAACAGAGATTGTGGATGATGAATTGGAAACCCCAAGGGGAGATT
TTGAAGATACCCAATTGGATTCAAGTTTGTCGCCGTTGGAGAGAAAGAGG
GAGGAGAGGCTGAAGCTGGAGGTGCCGAGTCTCACTGTGAAAGAAAGGAA
AGAGCTTGCGTCTTATGCTCACAGTTTGGGGGATAAACTCAAGACCCAGT
TGGTGGGTAAGTCTGGAGTTACCTCCAACGTTGCCACTTCTTTCATTGAG
ACCCTTGAAGCCAACGAGCTTCTCAAGATTAAAATACATAGGAGCTGTCC
AGGCGAGTTAGATGATGTGGTGAAGCAGTTGGAAGAAGCAACCGGTTCAG
TGGCTGTCGGTCAGATCGGTCGAACGGTGATTATATTCAAGCCCAGTCTC
TCCAAATTGAAGGCAGAAGAAAAGAAGAAACAAGCTCGTAACCTTATTCT
GAAAAAACAACTAAAACCAAGACTGGTAAACAAGGTAAAGGTTGTGCATT
TATGTTGTGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR035920YhbY-like_sf
IPR001890RNA-binding_CRM
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding